The gene/protein map for NC_007626 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227196

Identifier: 21227196

GI number: 21227196

Start: 1288279

End: 1288641

Strand: Direct

Name: 21227196

Synonym: MM_1094

Alternate gene names: NA

Gene position: 1288279-1288641 (Clockwise)

Preceding gene: 21227195

Following gene: 21227197

Centisome position: 31.45

GC content: 39.67

Gene sequence:

>363_bases
ATGATAGATTTTGCCTGCAAAGAGTTCAAAGTAGAGGATGTAATCAAGTGCGCCCTCAACCTTACAAAAGCTGATCTGAA
TGTTATGAAGTCATTCTTAAATGAACCTGACAGATGGATTGATACTGATGCCCTTTCAAAATCTCTGAAACTTGATGTTT
CTACAGTCCAGCGCTCCGTAAAAAAGCTGCATGAGAAAGAGATCCTTCAGAGATCGCAGCAAAACCTTGACGGAGGGGGC
TATGTTTACATTTATAAAATATATTCAAAAAACCAGATAAGGAATATCATTCAAAAAATCGTCCAGTCCTGGGCTGATAG
ACTCGGACAGGAACTGAAAGAATGGGAAAACGGAGGCGAATAA

Upstream 100 bases:

>100_bases
ATATAGTACTTCAGTTTTTTAGCTTTATTTTGCAGTACTTGCCAGTATATAAGTACTACGGACAGAATAATACAGTACTG
CAAAATAAAAGAGGGATTGA

Downstream 100 bases:

>100_bases
AATACTCAAAATCACACCCTACCTGGGAATACTTGTACTGATCGTTTCTATCGGCGGACTCTGGTATCCTGCACTCGGCT
ACTTTATGCTGCTGATCTTT

Product: putative transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MIDFACKEFKVEDVIKCALNLTKADLNVMKSFLNEPDRWIDTDALSKSLKLDVSTVQRSVKKLHEKEILQRSQQNLDGGG
YVYIYKIYSKNQIRNIIQKIVQSWADRLGQELKEWENGGE

Sequences:

>Translated_120_residues
MIDFACKEFKVEDVIKCALNLTKADLNVMKSFLNEPDRWIDTDALSKSLKLDVSTVQRSVKKLHEKEILQRSQQNLDGGG
YVYIYKIYSKNQIRNIIQKIVQSWADRLGQELKEWENGGE
>Mature_120_residues
MIDFACKEFKVEDVIKCALNLTKADLNVMKSFLNEPDRWIDTDALSKSLKLDVSTVQRSVKKLHEKEILQRSQQNLDGGG
YVYIYKIYSKNQIRNIIQKIVQSWADRLGQELKEWENGGE

Specific function: Unknown

COG id: COG3355

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13951; Mature: 13951

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFACKEFKVEDVIKCALNLTKADLNVMKSFLNEPDRWIDTDALSKSLKLDVSTVQRSV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
KKLHEKEILQRSQQNLDGGGYVYIYKIYSKNQIRNIIQKIVQSWADRLGQELKEWENGGE
HHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIDFACKEFKVEDVIKCALNLTKADLNVMKSFLNEPDRWIDTDALSKSLKLDVSTVQRSV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
KKLHEKEILQRSQQNLDGGGYVYIYKIYSKNQIRNIIQKIVQSWADRLGQELKEWENGGE
HHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA