| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
Click here to switch to the map view.
The map label for this gene is 21227183
Identifier: 21227183
GI number: 21227183
Start: 1273161
End: 1273541
Strand: Reverse
Name: 21227183
Synonym: MM_1081
Alternate gene names: NA
Gene position: 1273541-1273161 (Counterclockwise)
Preceding gene: 21227199
Following gene: 21227171
Centisome position: 31.09
GC content: 45.67
Gene sequence:
>381_bases GTGTTTCTGTTTGCTTCCGGTTGTGCCGGAGAAGACTCAGAGGCCGCATCTGAGGAATCAGATTTAGAAGCCTCTGCAGA GCCGCAGGATGATGTACAGCAGGAAAATGTTAGTTCTGGGTCCGCAAAGGATCATGTTGTCCGCCTTGAATACTACAAAG TAATAAGACCTTCAGAACTGGATGTCCAGACAGGCGATACGGTCTCATGGTGGAGCGGAAAAAGGCAGGGAACCTATATT CTCGTCAGTGAAGAAGGACTCTTTGAGGATCAGGAACTTGCTTACAGTGTTCCCTATAGCTATACTTTTAACAAGCCCGG ATCATATCTTTTCACTGTAAAAGATGTTCCGGAAATGAATGTTACTATCAGGGTGAACTGA
Upstream 100 bases:
>100_bases ATCTATCAAAAAGGTAATCTATATAAATTAACTTATAAATAAAGGCTTAAGGATGGTGAGATCCATGAAAGGGAAAATTC TGGTTTTACTTCTGGTATTT
Downstream 100 bases:
>100_bases GAACCTCAGTTTCCCCTTTTTTTAAAAATTATTTTTTCAGCAGATATCTGCTTTCTCTATGATATATGAAAAAAAGAATA CATAACATAGTATAATAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MFLFASGCAGEDSEAASEESDLEASAEPQDDVQQENVSSGSAKDHVVRLEYYKVIRPSELDVQTGDTVSWWSGKRQGTYI LVSEEGLFEDQELAYSVPYSYTFNKPGSYLFTVKDVPEMNVTIRVN
Sequences:
>Translated_126_residues MFLFASGCAGEDSEAASEESDLEASAEPQDDVQQENVSSGSAKDHVVRLEYYKVIRPSELDVQTGDTVSWWSGKRQGTYI LVSEEGLFEDQELAYSVPYSYTFNKPGSYLFTVKDVPEMNVTIRVN >Mature_126_residues MFLFASGCAGEDSEAASEESDLEASAEPQDDVQQENVSSGSAKDHVVRLEYYKVIRPSELDVQTGDTVSWWSGKRQGTYI LVSEEGLFEDQELAYSVPYSYTFNKPGSYLFTVKDVPEMNVTIRVN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14062; Mature: 14062
Theoretical pI: Translated: 3.93; Mature: 3.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLFASGCAGEDSEAASEESDLEASAEPQDDVQQENVSSGSAKDHVVRLEYYKVIRPSEL CEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEEEEEECCCCC DVQTGDTVSWWSGKRQGTYILVSEEGLFEDQELAYSVPYSYTFNKPGSYLFTVKDVPEMN CEECCCEEEECCCCCCCEEEEEECCCCCCCCCEEEECCCEEEECCCCCEEEEECCCCCCE VTIRVN EEEEEC >Mature Secondary Structure MFLFASGCAGEDSEAASEESDLEASAEPQDDVQQENVSSGSAKDHVVRLEYYKVIRPSEL CEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEEEEEECCCCC DVQTGDTVSWWSGKRQGTYILVSEEGLFEDQELAYSVPYSYTFNKPGSYLFTVKDVPEMN CEECCCEEEECCCCCCCEEEEEECCCCCCCCCEEEECCCEEEECCCCCEEEEECCCCCCE VTIRVN EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA