Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227167

Identifier: 21227167

GI number: 21227167

Start: 1249657

End: 1250001

Strand: Direct

Name: 21227167

Synonym: MM_1065

Alternate gene names: NA

Gene position: 1249657-1250001 (Clockwise)

Preceding gene: 21227166

Following gene: 21227168

Centisome position: 30.51

GC content: 30.43

Gene sequence:

>345_bases
TTGATCAGAACCCGTTTACATCATACCCGTTTACTGAAGAAATTTAGTCTTCAGGCATCGGGTGTCGAAAGATTTAGTCC
AATTGTTTTCTATTCCAGCTGTTTTCTATTCCAGCTGTTTTCTATTCCAATTGTTTTCTATTCCAATTGTTTTCTATTCC
AATTGTTTTCTATTCCAATTGTTTTCTATTCTGATTATTTATCATACCAGTTATTTACTGTGTTTTACTTTCTATGTTTT
TATAATTTGACCCCTGAAGCTATCCAGACAAATAAATTAATACAAAAATCAGCTTTCATAGAAATTGTGAGGAAGAAATT
TTTATGGAGAGTAAAGTTTTGCTAA

Upstream 100 bases:

>100_bases
CAGGGAATTTTTGCCCTTGTAAAAAAAGCCCGGGAATAATCCGGGGATCTCTCCTGCCTAATGCAGGAGTCAACTTCTTT
TTACTTCTGGTTATATTCCT

Downstream 100 bases:

>100_bases
ATCTTCTGTCGGTGGGACATGAAGACCTGTGGGATCTGAGCTTCAACAGAAAGCCACAATATAACAATATGGTCTATGGA
ATTAACAATGTGATCTATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MIRTRLHHTRLLKKFSLQASGVERFSPIVFYSSCFLFQLFSIPIVFYSNCFLFQLFSIPIVFYSDYLSYQLFTVFYFLCF
YNLTPEAIQTNKLIQKSAFIEIVRKKFLWRVKFC

Sequences:

>Translated_114_residues
MIRTRLHHTRLLKKFSLQASGVERFSPIVFYSSCFLFQLFSIPIVFYSNCFLFQLFSIPIVFYSDYLSYQLFTVFYFLCF
YNLTPEAIQTNKLIQKSAFIEIVRKKFLWRVKFC
>Mature_114_residues
MIRTRLHHTRLLKKFSLQASGVERFSPIVFYSSCFLFQLFSIPIVFYSNCFLFQLFSIPIVFYSDYLSYQLFTVFYFLCF
YNLTPEAIQTNKLIQKSAFIEIVRKKFLWRVKFC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13794; Mature: 13794

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRTRLHHTRLLKKFSLQASGVERFSPIVFYSSCFLFQLFSIPIVFYSNCFLFQLFSIPI
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFYSDYLSYQLFTVFYFLCFYNLTPEAIQTNKLIQKSAFIEIVRKKFLWRVKFC
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIRTRLHHTRLLKKFSLQASGVERFSPIVFYSSCFLFQLFSIPIVFYSNCFLFQLFSIPI
CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFYSDYLSYQLFTVFYFLCFYNLTPEAIQTNKLIQKSAFIEIVRKKFLWRVKFC
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA