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The map label for this gene is mc1

Identifier: 21227153

GI number: 21227153

Start: 1230098

End: 1230382

Strand: Reverse

Name: mc1

Synonym: MM_1051

Alternate gene names: NA

Gene position: 1230382-1230098 (Counterclockwise)

Preceding gene: 21227158

Following gene: 21227151

Centisome position: 30.04

GC content: 42.11

Gene sequence:

>285_bases
ATGGCTGACACACGAAATTTTGTTTTGCGAGATGTAGATGGCACGGAACATGGAGTTTTCACTGGAAAACAGCCTCGTCA
GGCTGCTTTGAAAGCTGCAAACAGAGGTAAAGGAACAAAATCAAAACCAGATATTATCCGTCTAAGAGAGCGCGGGACAA
AGAAGATTCACGTTTTCAAGGCATGGAAGCAGGTTGTCGCAGCTCCGAAAAACAAGCCTGAATGGATGCCGGATAAAATC
AGCAAACCTTTTGTTAAGAAAGAAAAAATAGAAACAATCGAGTAA

Upstream 100 bases:

>100_bases
TACCTTAAAGAAAGCAACAACTATTGACCACATTATAAGAAAATTATATATACTTTCAACTTAATCACTCTCTAATAATA
TACTTTGAGAGATGACCTTT

Downstream 100 bases:

>100_bases
AATACATTTTTCTTCATATACCCTGGAAAACCGGGGACATTTCATTTTTTTCAAAGCCCACGAGCATCTTCTTTTCCCTG
GATATTTTTAATACTTTTTT

Product: chromosomal protein

Products: NA

Alternate protein names: HMB [H]

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MADTRNFVLRDVDGTEHGVFTGKQPRQAALKAANRGKGTKSKPDIIRLRERGTKKIHVFKAWKQVVAAPKNKPEWMPDKI
SKPFVKKEKIETIE

Sequences:

>Translated_94_residues
MADTRNFVLRDVDGTEHGVFTGKQPRQAALKAANRGKGTKSKPDIIRLRERGTKKIHVFKAWKQVVAAPKNKPEWMPDKI
SKPFVKKEKIETIE
>Mature_93_residues
ADTRNFVLRDVDGTEHGVFTGKQPRQAALKAANRGKGTKSKPDIIRLRERGTKKIHVFKAWKQVVAAPKNKPEWMPDKIS
KPFVKKEKIETIE

Specific function: Protects DNA against thermal denaturation and modulates transcription [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008674
- ProDom:   PD010494 [H]

Pfam domain/function: PF05854 MC1 [H]

EC number: NA

Molecular weight: Translated: 10724; Mature: 10592

Theoretical pI: Translated: 11.11; Mature: 11.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTRNFVLRDVDGTEHGVFTGKQPRQAALKAANRGKGTKSKPDIIRLRERGTKKIHVFK
CCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEHHHH
AWKQVVAAPKNKPEWMPDKISKPFVKKEKIETIE
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ADTRNFVLRDVDGTEHGVFTGKQPRQAALKAANRGKGTKSKPDIIRLRERGTKKIHVFK
CCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEECCCCCCEEHHHH
AWKQVVAAPKNKPEWMPDKISKPFVKKEKIETIE
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3098561; 2111171 [H]