| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is feoB [C]
Identifier: 21227135
GI number: 21227135
Start: 1209101
End: 1211098
Strand: Reverse
Name: feoB [C]
Synonym: MM_1033
Alternate gene names: 21227135
Gene position: 1211098-1209101 (Counterclockwise)
Preceding gene: 21227136
Following gene: 21227134
Centisome position: 29.57
GC content: 46.85
Gene sequence:
>1998_bases GTGATAGAGATTTCCAGCTCATGCTGTAATTCCGGTGAGAGAGGTAAAAATGACCCCCTTTATGAAAGGATTCCTCCCTA TGATTTGACACTTGCTTTTATAGGCAACCCGAGCGTTGGAAAAAGCGTTTTTTTTAGCAGGCTTACAGGCGTCGGGGTTG AAGTTTCCAACTATCCTGGCACAACTGTTTCGCTCAAACAGGGAACTGTAAAAGTAAACGACAGGACCATTGAAGTAGTA GACCTTCCCGGAATATACTCTCTGGGGGTTGCAAACGAAGATGAAAAGGTAACCAAGAGATTCCTTATTGAAAATTCTCC TGATGTTATTGTTAATGTCCTTGATGCAAGCCGGCTTGAGAGAAACCTCTATCTGACCCTTCAGCTTCTGGAACTCGATA TCCCTATGGTCATCGCCTTAAATCAGGTAGATCTTGCAGCCGAGCTTGGTATCCTTGTTGATACGGATAAACTCTCGGAA CTTCTGGGCCTGCCCGTAGTCCCAACTGTTGCAACCTGGGGTGTGGGGCTTGACGATGTCGTGCTTGCGGCTCTTGAAGA AGCAAGAAAAGTCCAGAAGCACCACAGGGTAAGATACAGCCAGTGGATCCGTCAGGCTCTATCCGGGCTTGACCATGCTT TTCCGAATGTATCTCAAAGTGTTAAGATTGCAGCCCTGTTAAACGACGCGGAGTTTGTGGAACTCTGCTGCATGCCGCCT GAAGCAAATGCGATTCTTTCTTCTGCCAGGCGTTTGAGGCAGAATATTGAAATCGATTACGGAATTTCAGTCCCTGACAC GGTCGCAAGAGACCTTTACGGAGAGTCCGGATTTATTGTTGACACTGTGGTTTCAAGTTTTGAGCCTAAAAAAAGGTTCC GTGATAAAGTAGATAAAGTTCTTACTTCTCCTCACTTCGGAATAGCAGTCCTTATATCTGCTCTTCTGTTTACGTTTTTA ATGGTCTTCAGGGTAGGGGGTTTTCTCGAAACCTGGATTGTTAACGACCTTTTCGAACCTCATATAATTCAGCCCGTCGA GGAGATGACTCTTGATATGTCTCCTGTCGTCAGAAACCTTATCGTCTATTCCCTGCGAGGTGTGGAAGCCGGATTCGCAA TCGCAATCCCGTACATTGCAGTATTTTACGCGATTCTCTCCATATTCGAGGATTCGGGCTACCTGACAAGGGCAGCTTTT CTTCTGGACAATGTAACACATAAACTCGGGCTTCACGGGAGAGCTGTCATCCCTCTTGTTCTGGGGTTTGGCTGCAATGT CCCGGCAATAATGGCGGTACACGCACTCGGTACAAGAAGGGAAAAGAGGATAGCTTCGATTCTTATCTCTCTTATTCCCT GCTCTGCAAGGACAGTTATCATCCTTGGGCTTGTAGGGACCTTTGTTGGTTTCTGGCCTGCGGTTTCTATCTATGTGCTT GAGATCATTATAATCGGAGCAATGGGCTGGATTCTTGGAAGAACTCTTCCGGGCCAGAGAAGCGGTTTCATTATGGAAAT GACTCCTCTCAGGAAACCCGAACTCAAATCAACCCTCAGAAAGACCTGGATGAAAAGCCGTGAATTTTTATACATAGCTT TTCCGCTGCTGCTCGCAGGGAGTGCAGCCCTGGGAGTTGCCGATGCACTGGGACTTCTTTCTGTCTTCCAGGACTTCGTA GAGCCCATATCCGTAGGGCTTCTGGGACTTCCGGCTTTTGCCGCAACAGCTCTTGTCTTTGGGATTCTCAGAAAAGAAAT GGCGCTTCAGATTCTTGCAGTACTGGCAGGCACAGCCAATTTTGCAGCAGTGATGACCCCGCTTCAGATGTATCAGTTTG CGGTGATCACTACGATTTATGTCCCTTGCGTGGCAACGATTGCAGTACTGAAGCATGAACTCGGTACAAAGGATACAACT CTAATTGTCACCTTCACAATAGTCCTTGCTGTTGTAGTAGGTGTTTTGATCCGGATTTTCGGGCCTTTATTCCTTTAA
Upstream 100 bases:
>100_bases AAGAGATATAGCAAAAAAAATTTTCATCACTCCTAAATGAAAAGTCCTGTAAAAATGGATGATTCAGCTGTAACTGGAGT GGAGTGTAGTTGACGGAGAT
Downstream 100 bases:
>100_bases TTTTTCATTTTTTGTTCTTTTACTGTATTTTTTTCCTTATTCTAGCCTGTGATGCTGAATCAAATTTATGTGCCTTAAGC ACAATTTTTATATATTAAAA
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 665; Mature: 665
Protein sequence:
>665_residues MIEISSSCCNSGERGKNDPLYERIPPYDLTLAFIGNPSVGKSVFFSRLTGVGVEVSNYPGTTVSLKQGTVKVNDRTIEVV DLPGIYSLGVANEDEKVTKRFLIENSPDVIVNVLDASRLERNLYLTLQLLELDIPMVIALNQVDLAAELGILVDTDKLSE LLGLPVVPTVATWGVGLDDVVLAALEEARKVQKHHRVRYSQWIRQALSGLDHAFPNVSQSVKIAALLNDAEFVELCCMPP EANAILSSARRLRQNIEIDYGISVPDTVARDLYGESGFIVDTVVSSFEPKKRFRDKVDKVLTSPHFGIAVLISALLFTFL MVFRVGGFLETWIVNDLFEPHIIQPVEEMTLDMSPVVRNLIVYSLRGVEAGFAIAIPYIAVFYAILSIFEDSGYLTRAAF LLDNVTHKLGLHGRAVIPLVLGFGCNVPAIMAVHALGTRREKRIASILISLIPCSARTVIILGLVGTFVGFWPAVSIYVL EIIIIGAMGWILGRTLPGQRSGFIMEMTPLRKPELKSTLRKTWMKSREFLYIAFPLLLAGSAALGVADALGLLSVFQDFV EPISVGLLGLPAFAATALVFGILRKEMALQILAVLAGTANFAAVMTPLQMYQFAVITTIYVPCVATIAVLKHELGTKDTT LIVTFTIVLAVVVGVLIRIFGPLFL
Sequences:
>Translated_665_residues MIEISSSCCNSGERGKNDPLYERIPPYDLTLAFIGNPSVGKSVFFSRLTGVGVEVSNYPGTTVSLKQGTVKVNDRTIEVV DLPGIYSLGVANEDEKVTKRFLIENSPDVIVNVLDASRLERNLYLTLQLLELDIPMVIALNQVDLAAELGILVDTDKLSE LLGLPVVPTVATWGVGLDDVVLAALEEARKVQKHHRVRYSQWIRQALSGLDHAFPNVSQSVKIAALLNDAEFVELCCMPP EANAILSSARRLRQNIEIDYGISVPDTVARDLYGESGFIVDTVVSSFEPKKRFRDKVDKVLTSPHFGIAVLISALLFTFL MVFRVGGFLETWIVNDLFEPHIIQPVEEMTLDMSPVVRNLIVYSLRGVEAGFAIAIPYIAVFYAILSIFEDSGYLTRAAF LLDNVTHKLGLHGRAVIPLVLGFGCNVPAIMAVHALGTRREKRIASILISLIPCSARTVIILGLVGTFVGFWPAVSIYVL EIIIIGAMGWILGRTLPGQRSGFIMEMTPLRKPELKSTLRKTWMKSREFLYIAFPLLLAGSAALGVADALGLLSVFQDFV EPISVGLLGLPAFAATALVFGILRKEMALQILAVLAGTANFAAVMTPLQMYQFAVITTIYVPCVATIAVLKHELGTKDTT LIVTFTIVLAVVVGVLIRIFGPLFL >Mature_665_residues MIEISSSCCNSGERGKNDPLYERIPPYDLTLAFIGNPSVGKSVFFSRLTGVGVEVSNYPGTTVSLKQGTVKVNDRTIEVV DLPGIYSLGVANEDEKVTKRFLIENSPDVIVNVLDASRLERNLYLTLQLLELDIPMVIALNQVDLAAELGILVDTDKLSE LLGLPVVPTVATWGVGLDDVVLAALEEARKVQKHHRVRYSQWIRQALSGLDHAFPNVSQSVKIAALLNDAEFVELCCMPP EANAILSSARRLRQNIEIDYGISVPDTVARDLYGESGFIVDTVVSSFEPKKRFRDKVDKVLTSPHFGIAVLISALLFTFL MVFRVGGFLETWIVNDLFEPHIIQPVEEMTLDMSPVVRNLIVYSLRGVEAGFAIAIPYIAVFYAILSIFEDSGYLTRAAF LLDNVTHKLGLHGRAVIPLVLGFGCNVPAIMAVHALGTRREKRIASILISLIPCSARTVIILGLVGTFVGFWPAVSIYVL EIIIIGAMGWILGRTLPGQRSGFIMEMTPLRKPELKSTLRKTWMKSREFLYIAFPLLLAGSAALGVADALGLLSVFQDFV EPISVGLLGLPAFAATALVFGILRKEMALQILAVLAGTANFAAVMTPLQMYQFAVITTIYVPCVATIAVLKHELGTKDTT LIVTFTIVLAVVVGVLIRIFGPLFL
Specific function: Probable GTP-driven transporter of Fe(2+) ion [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=525, Percent_Identity=32, Blast_Score=223, Evalue=3e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate; PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 72643; Mature: 72643
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEISSSCCNSGERGKNDPLYERIPPYDLTLAFIGNPSVGKSVFFSRLTGVGVEVSNYPG CCEECCHHCCCCCCCCCCCCHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEECCCC TTVSLKQGTVKVNDRTIEVVDLPGIYSLGVANEDEKVTKRFLIENSPDVIVNVLDASRLE CEEEEECCEEEECCCEEEEEECCCCEECCCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHC RNLYLTLQLLELDIPMVIALNQVDLAAELGILVDTDKLSELLGLPVVPTVATWGVGLDDV CCCEEEEEEEECCCCEEEEECCHHHHHHCCEEEEHHHHHHHHCCCCCCHHHHCCCCHHHH VLAALEEARKVQKHHRVRYSQWIRQALSGLDHAFPNVSQSVKIAALLNDAEFVELCCMPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHCCCCC EANAILSSARRLRQNIEIDYGISVPDTVARDLYGESGFIVDTVVSSFEPKKRFRDKVDKV CHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHH LTSPHFGIAVLISALLFTFLMVFRVGGFLETWIVNDLFEPHIIQPVEEMTLDMSPVVRNL HCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHCCCHHHHHCCHHHHHHHH IVYSLRGVEAGFAIAIPYIAVFYAILSIFEDSGYLTRAAFLLDNVTHKLGLHGRAVIPLV HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH LGFGCNVPAIMAVHALGTRREKRIASILISLIPCSARTVIILGLVGTFVGFWPAVSIYVL HHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EIIIIGAMGWILGRTLPGQRSGFIMEMTPLRKPELKSTLRKTWMKSREFLYIAFPLLLAG HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHC SAALGVADALGLLSVFQDFVEPISVGLLGLPAFAATALVFGILRKEMALQILAVLAGTAN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH FAAVMTPLQMYQFAVITTIYVPCVATIAVLKHELGTKDTTLIVTFTIVLAVVVGVLIRIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH GPLFL HHHCC >Mature Secondary Structure MIEISSSCCNSGERGKNDPLYERIPPYDLTLAFIGNPSVGKSVFFSRLTGVGVEVSNYPG CCEECCHHCCCCCCCCCCCCHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEECCCC TTVSLKQGTVKVNDRTIEVVDLPGIYSLGVANEDEKVTKRFLIENSPDVIVNVLDASRLE CEEEEECCEEEECCCEEEEEECCCCEECCCCCCHHHHHHHHHCCCCCCCEEEHHHHHHHC RNLYLTLQLLELDIPMVIALNQVDLAAELGILVDTDKLSELLGLPVVPTVATWGVGLDDV CCCEEEEEEEECCCCEEEEECCHHHHHHCCEEEEHHHHHHHHCCCCCCHHHHCCCCHHHH VLAALEEARKVQKHHRVRYSQWIRQALSGLDHAFPNVSQSVKIAALLNDAEFVELCCMPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCHHHHHHCCCCC EANAILSSARRLRQNIEIDYGISVPDTVARDLYGESGFIVDTVVSSFEPKKRFRDKVDKV CHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHH LTSPHFGIAVLISALLFTFLMVFRVGGFLETWIVNDLFEPHIIQPVEEMTLDMSPVVRNL HCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHCCCHHHHHCCHHHHHHHH IVYSLRGVEAGFAIAIPYIAVFYAILSIFEDSGYLTRAAFLLDNVTHKLGLHGRAVIPLV HHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH LGFGCNVPAIMAVHALGTRREKRIASILISLIPCSARTVIILGLVGTFVGFWPAVSIYVL HHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH EIIIIGAMGWILGRTLPGQRSGFIMEMTPLRKPELKSTLRKTWMKSREFLYIAFPLLLAG HHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHC SAALGVADALGLLSVFQDFVEPISVGLLGLPAFAATALVFGILRKEMALQILAVLAGTAN CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH FAAVMTPLQMYQFAVITTIYVPCVATIAVLKHELGTKDTTLIVTFTIVLAVVVGVLIRIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH GPLFL HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]