| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227123
Identifier: 21227123
GI number: 21227123
Start: 1193677
End: 1194201
Strand: Direct
Name: 21227123
Synonym: MM_1021
Alternate gene names: NA
Gene position: 1193677-1194201 (Clockwise)
Preceding gene: 21227120
Following gene: 21227124
Centisome position: 29.14
GC content: 32.57
Gene sequence:
>525_bases GTGATAATACATTTCTATTTTCTCCTCTCGATTACAGATAATTCTATGATTAATAGTAGAACAAATTCTATGGCTAATGG TAGAAATGTTTATTCACTAACCTGCCCCTTACGAGGCACTAAAGAAATTTTTGCTCAGGGATTTCGACGTAGGACAGATA CGACAAAAAAGAGCAACACTGGATATTATTCATTACAACACTCGGACTTATTTTTTGAAGGGAAAGCCCTCGAAAGGAAA TTTGAGGTTATGTGCAGGAAATCGGACATGTACAGAACTCTTACAAAAATTCCAAATAGATTCATGAAAACAAACATGGA CATTCCTGATTCCGAGCTACACAAGCTGCAGGATTCTTATCGAATTTATATTGTCGAAGGTCCACAGCAGTTTTCTGGAA CCTTTCTAAAGAAGCATAATTTCTATATTATTTTTAAGTTGCTTTCTCTTAGATATAGATCTCATTCTGTTCCCATATTT AATAATATATTATCTGACTATATTATTTATTTTTATACTATTTAA
Upstream 100 bases:
>100_bases TGGGGATTTTAGCTTTTCTTTCGTCTTTCAAGAAAATAAGATGTTTCAGCCCTTTTTCATCTCCTGCGAGAAGAATTGGG TAGATAGGGGATTTGATTAT
Downstream 100 bases:
>100_bases CAGATATTCATATCCGAAAACAGATTTTAACGTTATTCCATATATCTTTTATGGCCGGGTCATCAAACAATTCTGAAAAA AGCTCCAAAATTCTTACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MIIHFYFLLSITDNSMINSRTNSMANGRNVYSLTCPLRGTKEIFAQGFRRRTDTTKKSNTGYYSLQHSDLFFEGKALERK FEVMCRKSDMYRTLTKIPNRFMKTNMDIPDSELHKLQDSYRIYIVEGPQQFSGTFLKKHNFYIIFKLLSLRYRSHSVPIF NNILSDYIIYFYTI
Sequences:
>Translated_174_residues MIIHFYFLLSITDNSMINSRTNSMANGRNVYSLTCPLRGTKEIFAQGFRRRTDTTKKSNTGYYSLQHSDLFFEGKALERK FEVMCRKSDMYRTLTKIPNRFMKTNMDIPDSELHKLQDSYRIYIVEGPQQFSGTFLKKHNFYIIFKLLSLRYRSHSVPIF NNILSDYIIYFYTI >Mature_174_residues MIIHFYFLLSITDNSMINSRTNSMANGRNVYSLTCPLRGTKEIFAQGFRRRTDTTKKSNTGYYSLQHSDLFFEGKALERK FEVMCRKSDMYRTLTKIPNRFMKTNMDIPDSELHKLQDSYRIYIVEGPQQFSGTFLKKHNFYIIFKLLSLRYRSHSVPIF NNILSDYIIYFYTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20717; Mature: 20717
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIHFYFLLSITDNSMINSRTNSMANGRNVYSLTCPLRGTKEIFAQGFRRRTDTTKKSNT CEEEEEEEEEECCCCHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC GYYSLQHSDLFFEGKALERKFEVMCRKSDMYRTLTKIPNRFMKTNMDIPDSELHKLQDSY CEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHCCCE RIYIVEGPQQFSGTFLKKHNFYIIFKLLSLRYRSHSVPIFNNILSDYIIYFYTI EEEEEECCCCCCCEEECCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHEEEEEC >Mature Secondary Structure MIIHFYFLLSITDNSMINSRTNSMANGRNVYSLTCPLRGTKEIFAQGFRRRTDTTKKSNT CEEEEEEEEEECCCCHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCC GYYSLQHSDLFFEGKALERKFEVMCRKSDMYRTLTKIPNRFMKTNMDIPDSELHKLQDSY CEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHCCCE RIYIVEGPQQFSGTFLKKHNFYIIFKLLSLRYRSHSVPIFNNILSDYIIYFYTI EEEEEECCCCCCCEEECCCCCEEEEEHHHHHHCCCCCCHHHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA