| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227072
Identifier: 21227072
GI number: 21227072
Start: 1148790
End: 1149665
Strand: Reverse
Name: 21227072
Synonym: MM_0970
Alternate gene names: NA
Gene position: 1149665-1148790 (Counterclockwise)
Preceding gene: 21227073
Following gene: 21227065
Centisome position: 28.07
GC content: 39.95
Gene sequence:
>876_bases TTGCTATTCATAGCTATACTTATTATTCTTTTTGTTGGGGGCATATTTACTCATGCTATTTACATGGATGCAATAGATTG GAGAGATAGGGGCCAAAGATATTATTGCATATATCAGGTTAGTGTGGGAAATCTTTCCGGAAGGGAGGTAGAGGGAACTA CTGTAGTAATGGTTCCGATTCCTGCGACAAAAGAAGGCAAACTATTTACTCCCCCGGCTCAGAAAGATCCTTATTTCACC CAGGAGCTGATGCATGAAATCAACAACTGGCCTGAAAAACACCGCAAAGGCCCCTATTTTGAAAATGCAACGGAAGTTTT TGATAACAAAACAATAAACGGGAACTGGACAACTTTCACTGCAGAAACCGATAAAGGATATATGCTTGGATTCAGAACAA ACGAGACAAGGCTCGAAGATATCTCTTATAGTGCAGATTTTGTTGCTGACTACTTCGACATTTTCGATCCCATAAATAAT GGGAGCCCGATATTATTCCCAGTTGAAAACGTTTCTAATATTTCTGTAGTCTCCTATGGAGAATACATTAAATATGCCTC GAATCCGACGTATGACAGCTATGTCTACGTAAGCGATAATCTTGGAGAAGGATCGGTATCTTTCTATGTCCATCTGCAGG CAAATAATGACCCCAATGAATGGTCCAGGGAATACAGGGGTCTGTATATGAATGAAATTATAACAAATGTTAATGCCACA GGCAACTTAAAAGTCAGTGCTGTTCTGGGGCAGGTTATACCTCATGGGAACTACACCTTATGGTACGGTCGATATGGTCC AGAATATTATGCTAATGAAACCTTAATGGTGAGACGAAGCAGCGTATCCGGTACATATGCTTTGTATGAAAATTAA
Upstream 100 bases:
>100_bases AGACAGCAAAGTACAATATGGGGCTTGTAAAGTATGTGAGAGGGTAATCCTCTCAATTTTTTAAACATAATCTGGGTGAG TAATAGTGAGAAAAAGAAAT
Downstream 100 bases:
>100_bases TGCATTCGGAGAAGATTGGCCACAGGAGCACATCTTTAATTTTAGTATATTTAATTCATGGCAGAAATGTGTGTGGGAAA TAACAGGCAAAATTACACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MLFIAILIILFVGGIFTHAIYMDAIDWRDRGQRYYCIYQVSVGNLSGREVEGTTVVMVPIPATKEGKLFTPPAQKDPYFT QELMHEINNWPEKHRKGPYFENATEVFDNKTINGNWTTFTAETDKGYMLGFRTNETRLEDISYSADFVADYFDIFDPINN GSPILFPVENVSNISVVSYGEYIKYASNPTYDSYVYVSDNLGEGSVSFYVHLQANNDPNEWSREYRGLYMNEIITNVNAT GNLKVSAVLGQVIPHGNYTLWYGRYGPEYYANETLMVRRSSVSGTYALYEN
Sequences:
>Translated_291_residues MLFIAILIILFVGGIFTHAIYMDAIDWRDRGQRYYCIYQVSVGNLSGREVEGTTVVMVPIPATKEGKLFTPPAQKDPYFT QELMHEINNWPEKHRKGPYFENATEVFDNKTINGNWTTFTAETDKGYMLGFRTNETRLEDISYSADFVADYFDIFDPINN GSPILFPVENVSNISVVSYGEYIKYASNPTYDSYVYVSDNLGEGSVSFYVHLQANNDPNEWSREYRGLYMNEIITNVNAT GNLKVSAVLGQVIPHGNYTLWYGRYGPEYYANETLMVRRSSVSGTYALYEN >Mature_291_residues MLFIAILIILFVGGIFTHAIYMDAIDWRDRGQRYYCIYQVSVGNLSGREVEGTTVVMVPIPATKEGKLFTPPAQKDPYFT QELMHEINNWPEKHRKGPYFENATEVFDNKTINGNWTTFTAETDKGYMLGFRTNETRLEDISYSADFVADYFDIFDPINN GSPILFPVENVSNISVVSYGEYIKYASNPTYDSYVYVSDNLGEGSVSFYVHLQANNDPNEWSREYRGLYMNEIITNVNAT GNLKVSAVLGQVIPHGNYTLWYGRYGPEYYANETLMVRRSSVSGTYALYEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33262; Mature: 33262
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFIAILIILFVGGIFTHAIYMDAIDWRDRGQRYYCIYQVSVGNLSGREVEGTTVVMVPI CHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEEEECCCCCCEECCEEEEEEEC PATKEGKLFTPPAQKDPYFTQELMHEINNWPEKHRKGPYFENATEVFDNKTINGNWTTFT CCCCCCCEECCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCHHHHHCCCEECCCEEEEE AETDKGYMLGFRTNETRLEDISYSADFVADYFDIFDPINNGSPILFPVENVSNISVVSYG EECCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECC EYIKYASNPTYDSYVYVSDNLGEGSVSFYVHLQANNDPNEWSREYRGLYMNEIITNVNAT CEEEECCCCCCCCEEEEECCCCCCEEEEEEEEEECCCHHHHHHHHCCEEHHHHHHCCCCC GNLKVSAVLGQVIPHGNYTLWYGRYGPEYYANETLMVRRSSVSGTYALYEN CCEEEEEEHHHHCCCCCEEEEEECCCCCHHCCCEEEEEECCCCCEEEEECC >Mature Secondary Structure MLFIAILIILFVGGIFTHAIYMDAIDWRDRGQRYYCIYQVSVGNLSGREVEGTTVVMVPI CHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEEEEEEEECCCCCCEECCEEEEEEEC PATKEGKLFTPPAQKDPYFTQELMHEINNWPEKHRKGPYFENATEVFDNKTINGNWTTFT CCCCCCCEECCCCCCCCCHHHHHHHHHHCCHHHHCCCCCCCCHHHHHCCCEECCCEEEEE AETDKGYMLGFRTNETRLEDISYSADFVADYFDIFDPINNGSPILFPVENVSNISVVSYG EECCCCEEEEEECCCCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEECC EYIKYASNPTYDSYVYVSDNLGEGSVSFYVHLQANNDPNEWSREYRGLYMNEIITNVNAT CEEEECCCCCCCCEEEEECCCCCCEEEEEEEEEECCCHHHHHHHHCCEEHHHHHHCCCCC GNLKVSAVLGQVIPHGNYTLWYGRYGPEYYANETLMVRRSSVSGTYALYEN CCEEEEEEHHHHCCCCCEEEEEECCCCCHHCCCEEEEEECCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA