Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21227062

Identifier: 21227062

GI number: 21227062

Start: 1140024

End: 1140323

Strand: Direct

Name: 21227062

Synonym: MM_0960

Alternate gene names: NA

Gene position: 1140024-1140323 (Clockwise)

Preceding gene: 21227061

Following gene: 21227063

Centisome position: 27.83

GC content: 38.67

Gene sequence:

>300_bases
ATGGCTGAGATTTTAAGATTATCACCTGCTATCTGTGCGTATCCTGACGAGACATATGAAAATTTGAAGATAGAAGTAGT
TCTTCCGGGCGTAGAAAAAGAAAACATTTCTTTTAAGGTTGTAGAAGACGGTTTTTATGTAAAAGCGACCAAAGAAGGAG
TTGAGTATACTGACAGCTATGCAGTATGCTGCCCTATAAGCCCTGAGAAAGCTACTGCAACCTATTCAAATGGAGTGCTC
AAAGTCAATGTGCCATATCAGCAGCCTTTTGAAAAGGCAGTTGATGTCAAAATAGAATAA

Upstream 100 bases:

>100_bases
TGGCTCATTGTGTTTATAAAAAAAAGACCCGGACTGAAGTGAAATAAATATGTAAGATATATATAAATATCTTAATAGGC
GATTTTATCTGGGGAATGTT

Downstream 100 bases:

>100_bases
ATATCACATTTAAAATGACAGCAAGTTTGAAGTCATCAAGCTACAAGATTTTTGGGGAGAGTATTCAATGAAAAATCCCG
TGCCCAGAATAATAAAAACT

Product: putative small heat shock protein

Products: NA

Alternate protein names: Heat Shock Protein

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MAEILRLSPAICAYPDETYENLKIEVVLPGVEKENISFKVVEDGFYVKATKEGVEYTDSYAVCCPISPEKATATYSNGVL
KVNVPYQQPFEKAVDVKIE

Sequences:

>Translated_99_residues
MAEILRLSPAICAYPDETYENLKIEVVLPGVEKENISFKVVEDGFYVKATKEGVEYTDSYAVCCPISPEKATATYSNGVL
KVNVPYQQPFEKAVDVKIE
>Mature_98_residues
AEILRLSPAICAYPDETYENLKIEVVLPGVEKENISFKVVEDGFYVKATKEGVEYTDSYAVCCPISPEKATATYSNGVLK
VNVPYQQPFEKAVDVKIE

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11026; Mature: 10894

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEILRLSPAICAYPDETYENLKIEVVLPGVEKENISFKVVEDGFYVKATKEGVEYTDSY
CCCCEECCCCEEECCCCCCCCEEEEEEECCCCCCCCEEEEEECCEEEEEECCCCCCCCCE
AVCCPISPEKATATYSNGVLKVNVPYQQPFEKAVDVKIE
EEEEECCCCCCEEEECCCEEEEECCCCCCCCCEEEEEEC
>Mature Secondary Structure 
AEILRLSPAICAYPDETYENLKIEVVLPGVEKENISFKVVEDGFYVKATKEGVEYTDSY
CCCEECCCCEEECCCCCCCCEEEEEEECCCCCCCCEEEEEECCEEEEEECCCCCCCCCE
AVCCPISPEKATATYSNGVLKVNVPYQQPFEKAVDVKIE
EEEEECCCCCCEEEECCCEEEEECCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA