| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227061
Identifier: 21227061
GI number: 21227061
Start: 1139362
End: 1139790
Strand: Direct
Name: 21227061
Synonym: MM_0959
Alternate gene names: NA
Gene position: 1139362-1139790 (Clockwise)
Preceding gene: 21227060
Following gene: 21227062
Centisome position: 27.81
GC content: 41.49
Gene sequence:
>429_bases ATGACCGAACTAAAATCAGAAAGCTCGAAATTTGAGATTCCACACGGGTACGGTATGCCCGTAATTAATCTGTATTTCTG GGTAGGGCTGATTTCTGCAGTCCTGCTCAGGGGTATAATTATCGCTGACTACTACAGTGTTTTCTGGGGAAAAGCAATAT GGTATCTGGGAATAACAGGTTACCTCTGGTTCTTCGCTCACAGATATCGCGTTGCAAGACGAAGGTTTGCTGTGATTAGA GACCTGAATCTGCTTGAAAAAATAAGAATCAGGCAGAAACTTTCATGCCAGGACTTTGAAGGGCTGGAATATCTTCTCTG GAGCCTTTCAGTTTCAAAAGAGCGTGCAAACTACTATGTAATATTTTTATTCTCGATAATAGCAATTGTTCTATCCCTGA GCCTTGACCTCGGGATTATAAAACTCTGA
Upstream 100 bases:
>100_bases GAAAGGAACGGAGATGCCCTGTAACCAGGCACCTCTTTATTCTCATTTACATTATTTACCATTGAACAAAGAAACGCTTA AAGAATAAGGCAGATAGACG
Downstream 100 bases:
>100_bases AAAGGAGCCAGATATAAAGATTCTTTGTAAAAGAATCTTTCAATACTTTTCTATATTCAATTTATTTTCATGAACACGCG ATGTCTCGTGTCTCATTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MTELKSESSKFEIPHGYGMPVINLYFWVGLISAVLLRGIIIADYYSVFWGKAIWYLGITGYLWFFAHRYRVARRRFAVIR DLNLLEKIRIRQKLSCQDFEGLEYLLWSLSVSKERANYYVIFLFSIIAIVLSLSLDLGIIKL
Sequences:
>Translated_142_residues MTELKSESSKFEIPHGYGMPVINLYFWVGLISAVLLRGIIIADYYSVFWGKAIWYLGITGYLWFFAHRYRVARRRFAVIR DLNLLEKIRIRQKLSCQDFEGLEYLLWSLSVSKERANYYVIFLFSIIAIVLSLSLDLGIIKL >Mature_141_residues TELKSESSKFEIPHGYGMPVINLYFWVGLISAVLLRGIIIADYYSVFWGKAIWYLGITGYLWFFAHRYRVARRRFAVIRD LNLLEKIRIRQKLSCQDFEGLEYLLWSLSVSKERANYYVIFLFSIIAIVLSLSLDLGIIKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16683; Mature: 16552
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELKSESSKFEIPHGYGMPVINLYFWVGLISAVLLRGIIIADYYSVFWGKAIWYLGITG CCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLWFFAHRYRVARRRFAVIRDLNLLEKIRIRQKLSCQDFEGLEYLLWSLSVSKERANYYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHH IFLFSIIAIVLSLSLDLGIIKL HHHHHHHHHHHHHHHCCCEECC >Mature Secondary Structure TELKSESSKFEIPHGYGMPVINLYFWVGLISAVLLRGIIIADYYSVFWGKAIWYLGITG CCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLWFFAHRYRVARRRFAVIRDLNLLEKIRIRQKLSCQDFEGLEYLLWSLSVSKERANYYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCHH IFLFSIIAIVLSLSLDLGIIKL HHHHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA