| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227056
Identifier: 21227056
GI number: 21227056
Start: 1131813
End: 1132202
Strand: Reverse
Name: 21227056
Synonym: MM_0954
Alternate gene names: NA
Gene position: 1132202-1131813 (Counterclockwise)
Preceding gene: 21227057
Following gene: 21227055
Centisome position: 27.64
GC content: 36.41
Gene sequence:
>390_bases TTGCCCTTTATGACTTTCTTTGCATCCCGGTTATATCCGGTAAATGAATCTTACACAGGTTGCTTTGCAAATCTATACAT TCATATCTTATATCGGCTGAATCTGGATTTGAACTCAGATTCAATCTATCGAATTCGATTAGAAGCCGAAGAACATTCCC AGGTTGAAGTTAAATATGAGCTGAAGGAATGTATCAAGGTTGATTATAAAGCCGAATGGCATATTGGTTTCCTCCTTGTT TGTATTGTTTCAATACCGATGCCTATGTATACTCTTTTGAGTAACACTTCTTCGAAAAGCTTGCTTAAAGCTTTCTTTAC CAACCCCCCCATAATGTTACTCTGCCAGCCACTCACAGAAATTATTTTTGGAAATTTCTGTTCTATTTAA
Upstream 100 bases:
>100_bases AGCTGAGGAACATATCTTTCACTCCATTCTTTTCTTTTATTTTGTTCATTCCCGTTATACATCCGTCTGCAATTGGTCCA GGGATTCACTGCACTCCCAA
Downstream 100 bases:
>100_bases ATTTACAGTTCTAATTTCTAAGTGGCAGTGAGCATACTTAGCTATATATATCAGCTTATATAAATTGAATAGAACTAGAC ATCCTTACAAATCATAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MPFMTFFASRLYPVNESYTGCFANLYIHILYRLNLDLNSDSIYRIRLEAEEHSQVEVKYELKECIKVDYKAEWHIGFLLV CIVSIPMPMYTLLSNTSSKSLLKAFFTNPPIMLLCQPLTEIIFGNFCSI
Sequences:
>Translated_129_residues MPFMTFFASRLYPVNESYTGCFANLYIHILYRLNLDLNSDSIYRIRLEAEEHSQVEVKYELKECIKVDYKAEWHIGFLLV CIVSIPMPMYTLLSNTSSKSLLKAFFTNPPIMLLCQPLTEIIFGNFCSI >Mature_128_residues PFMTFFASRLYPVNESYTGCFANLYIHILYRLNLDLNSDSIYRIRLEAEEHSQVEVKYELKECIKVDYKAEWHIGFLLVC IVSIPMPMYTLLSNTSSKSLLKAFFTNPPIMLLCQPLTEIIFGNFCSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15021; Mature: 14890
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00338 SOMATOTROPIN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFMTFFASRLYPVNESYTGCFANLYIHILYRLNLDLNSDSIYRIRLEAEEHSQVEVKYE CCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCEEEEEEH LKECIKVDYKAEWHIGFLLVCIVSIPMPMYTLLSNTSSKSLLKAFFTNPPIMLLCQPLTE HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCCEEEHHHHHH IIFGNFCSI HHHHHHCCC >Mature Secondary Structure PFMTFFASRLYPVNESYTGCFANLYIHILYRLNLDLNSDSIYRIRLEAEEHSQVEVKYE CHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCEEEEEEH LKECIKVDYKAEWHIGFLLVCIVSIPMPMYTLLSNTSSKSLLKAFFTNPPIMLLCQPLTE HHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHCCCCCEEEHHHHHH IIFGNFCSI HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA