| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21227032
Identifier: 21227032
GI number: 21227032
Start: 1097423
End: 1097785
Strand: Reverse
Name: 21227032
Synonym: MM_0930
Alternate gene names: NA
Gene position: 1097785-1097423 (Counterclockwise)
Preceding gene: 21227033
Following gene: 21227030
Centisome position: 26.8
GC content: 43.53
Gene sequence:
>363_bases ATGTCGAGTGAAGGAGATTTTCTACTGGTCGTAACTATAGTGAAAAAAGGATGGGGGGATGAAGTGGTCAAAGCTTCCAG AAAAGCTGGTGCTCAGGGTGGGACAATCTTATACGGGCGCGGCACAGGTATACACGAAAATAAGAGTATTCTTGGTCTGA TGATAGAACCTGAAAAGGAAATCGTTCTTACCATAACCGAATCATGTATAGCAGACAATATCCTGAAATCCATTACTGAG GCGGTAAAACTCGATGAGCCCGGAACAGGTGTAGGATTTATAGTCCCTCTGGAGAAAGTGTTTGGCATTACCCGTTACTT CTGTGAAATGCAGGACAGATCACAGAAAAGTTCCGGTTCATAA
Upstream 100 bases:
>100_bases CTTGTAGACGGTTTCGGCCTGATCGCAATGATCGCTCTTGCGCCTATTATCTTTGTTATGCTGCTGGGTGTTTATATACG ATTTAAAGGAGGTATAAATA
Downstream 100 bases:
>100_bases GTAGGCATTAGGGGTAATGTGGATATCTTTCTGACATCAGATGTTTATTGTAATATAAAGAAAAATAGTTTTCATTTGCC TCTCATTATTTCAGAATTAC
Product: nitrogen regulatory protein P-II
Products: NA
Alternate protein names: PII Family Protein; Nitrogen Regulatory Protein P-Ii; Nitrogen Regulatory PII Family Protein; P-II Family Regulatory Protein; Regulatory Protein P-II Family
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MSSEGDFLLVVTIVKKGWGDEVVKASRKAGAQGGTILYGRGTGIHENKSILGLMIEPEKEIVLTITESCIADNILKSITE AVKLDEPGTGVGFIVPLEKVFGITRYFCEMQDRSQKSSGS
Sequences:
>Translated_120_residues MSSEGDFLLVVTIVKKGWGDEVVKASRKAGAQGGTILYGRGTGIHENKSILGLMIEPEKEIVLTITESCIADNILKSITE AVKLDEPGTGVGFIVPLEKVFGITRYFCEMQDRSQKSSGS >Mature_119_residues SSEGDFLLVVTIVKKGWGDEVVKASRKAGAQGGTILYGRGTGIHENKSILGLMIEPEKEIVLTITESCIADNILKSITEA VKLDEPGTGVGFIVPLEKVFGITRYFCEMQDRSQKSSGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12921; Mature: 12790
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEGDFLLVVTIVKKGWGDEVVKASRKAGAQGGTILYGRGTGIHENKSILGLMIEPEKE CCCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCE IVLTITESCIADNILKSITEAVKLDEPGTGVGFIVPLEKVFGITRYFCEMQDRSQKSSGS EEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SSEGDFLLVVTIVKKGWGDEVVKASRKAGAQGGTILYGRGTGIHENKSILGLMIEPEKE CCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCE IVLTITESCIADNILKSITEAVKLDEPGTGVGFIVPLEKVFGITRYFCEMQDRSQKSSGS EEEEEHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA