| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226985
Identifier: 21226985
GI number: 21226985
Start: 1042702
End: 1044606
Strand: Direct
Name: 21226985
Synonym: MM_0883
Alternate gene names: NA
Gene position: 1042702-1044606 (Clockwise)
Preceding gene: 21226984
Following gene: 21226989
Centisome position: 25.45
GC content: 49.61
Gene sequence:
>1905_bases ATGTCCAGACCAGCATACCTTGGCAAAATGCTCCTGCACTGGTGCGAAGCCTGCAATGTGCCTGTGCTCGGAAAGAAGTG TGGGTGCGGCAATAAAACAAAAAGAGTAGATGTAACTCCTCCCGGAGATATCCGTCCCGCTTTTGATTATGATATAAGGC GCATAAATTCCATTTCTGAAAAACAATTTAATGCTCCCCTTATCCCGGATGACCACCTTGTGGTGCTTAACAAAGCCCCT TATGAAGACCGCATGGATGAAATCATAGTTGATGGGGAAGTCATTGCATCCATAAGGTTTGAAATCGAGAGCTGCGAATG GGTCCTTCTCCCCCGCCTAGAAGGGGCAAGGCGGCTTTTCCAGGGCAGGGACAGGAAAGACCTGAAAAAATGGGTAGTAA TTGAAGAGGAAATCCTGCCTTTCATCCTGAAAAAAGGAGCAAGTATCCTAGCTCCCGGAGTCCTTGACGCAGACCCTGAA ATTAAAAAAGAGGACGAAGTAGTTGTCCTGAACCCTGCCGGAGAAGTGGTCTGCTGCGGACGAGCACGGATGGCAGGAAA AGAGATGATAGAGGAAAAGCGCGGAAATGCGGTAAAGCCTCGCTGGAGCGCCGAACCTGCGGCTGCAAAAACTCTCGAAC CAGGGAGAAACTGGGAAGATGCTGTAAAAGCCAATGAGAAAATCCTGGACCGAATGATAGAGGAAGCTCATGCCTTCATA AGGGACGTTTCAGGGAACATGAACCTGAAAGTCAGCGTGTCATATTCCGGGGGAAAGGACAGCCTTGCGGTCCTGCAGCT GGTGGACGAAGCACTTGACGATTATGAGATTATGTTTGCAGATACAGGGCTTGAGTTTCCGGAAACCCTTGAGAATGTCA GTGAGGTTGCGAAATATTACGGAAAGCCTTTCAGAACTTCAAGCGCAGGAGATTCTTTCTGGGAGTCCATAGGAGTTTTC GGCCCCCCTACAATGGACACGCGCTGGTGCTGCAAGATCTGTAAACTCGGGCCGATTACAAGGCTGATTGACGAAAACTA TGAGGGAGGCTGCCTGAGCTTCATAGGGCAGCGCCAGTACGAGTCCCATGCTCGGTCTATCAGCAAAAGGGTATGGAAAA ACCCATGGGTAGGGAACCAGGTTGGAGCGTCCCCCATACAGGAATGGACAGCCCTGCACATCTGGCTTTATCTGTTCAGG ACGAAGGCTCCTTACAATCCGGCATATGAGAAAGGGTATGACCGGATGGGGTGCTGGCTATGCCCATCTTCGTCTTTATC TGATTTCTTCCAGCTTGGGGAAAGCCATCCTGAACTCGCGGAAAAGCTCAACTTTCACCTGCGTGCTTATGCAAAGAAAA TGGGGCTTTCCCCCGAATGGGTGAAGTACGGCTTATGGCGCTTTAAACGCTACCCAAAAGTATTGCAGGAACTTGCGGAC AGAAAAGGAATTTCCCTTCTTCCTTCCCAGGAAGCTCCAAAAGAGCTCAATTTCGAGGTCGCCACAGGGTACAGGCCCTG CAAAGCAGGAGGAATTTCTGCTGATGGAAGCTTCGGGCAGGCTATTGACATAGAGATTCTTGAAGAAAGCGGCATGCTCA AGCCGATAGGGAAGGTTTCTTTCATTGAAGGGGCTGCTTCTGTTTCTATGGGAGAATCGAGAGCTCAGGTCTTTGCTTCA GGAAACGTGAATGGGAGAAGCGAAAACGAAAAGACTCTGAAAAAGCTCATGCAAAAGGTTGAGTTTTCGGTAAGGAGAGC TGTCCTCTGCCAGGGGTGCGGGGTCTGTGTAGGGCACTGCGAACACGGCGCAATTGAAATGAAAGAGAAGAGAGCCTGGA TAAAAGACAGCTGCACTCACTGTGGAGCCTGTATAGAGGTCTGTCCACTTGTGAAATTTATGTAA
Upstream 100 bases:
>100_bases GGTTGAGCCAGAGCTTTTTACAGAAATTTTTGGTCAAGCTTTTTTTTAAAAAGGTTGAGCCAAAGCCTTTTAAAGGGGGA CTTCACTCAATCTGCGTGAC
Downstream 100 bases:
>100_bases GCGTGATCAGGAATCGTAAAACAGGGGCAGGTCTGGAAAAATTAGAAAAAGAAAATAAAGAAAAAGCAGAAAAGTGAATC CTGGAAAAGCAGGGCGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 634; Mature: 633
Protein sequence:
>634_residues MSRPAYLGKMLLHWCEACNVPVLGKKCGCGNKTKRVDVTPPGDIRPAFDYDIRRINSISEKQFNAPLIPDDHLVVLNKAP YEDRMDEIIVDGEVIASIRFEIESCEWVLLPRLEGARRLFQGRDRKDLKKWVVIEEEILPFILKKGASILAPGVLDADPE IKKEDEVVVLNPAGEVVCCGRARMAGKEMIEEKRGNAVKPRWSAEPAAAKTLEPGRNWEDAVKANEKILDRMIEEAHAFI RDVSGNMNLKVSVSYSGGKDSLAVLQLVDEALDDYEIMFADTGLEFPETLENVSEVAKYYGKPFRTSSAGDSFWESIGVF GPPTMDTRWCCKICKLGPITRLIDENYEGGCLSFIGQRQYESHARSISKRVWKNPWVGNQVGASPIQEWTALHIWLYLFR TKAPYNPAYEKGYDRMGCWLCPSSSLSDFFQLGESHPELAEKLNFHLRAYAKKMGLSPEWVKYGLWRFKRYPKVLQELAD RKGISLLPSQEAPKELNFEVATGYRPCKAGGISADGSFGQAIDIEILEESGMLKPIGKVSFIEGAASVSMGESRAQVFAS GNVNGRSENEKTLKKLMQKVEFSVRRAVLCQGCGVCVGHCEHGAIEMKEKRAWIKDSCTHCGACIEVCPLVKFM
Sequences:
>Translated_634_residues MSRPAYLGKMLLHWCEACNVPVLGKKCGCGNKTKRVDVTPPGDIRPAFDYDIRRINSISEKQFNAPLIPDDHLVVLNKAP YEDRMDEIIVDGEVIASIRFEIESCEWVLLPRLEGARRLFQGRDRKDLKKWVVIEEEILPFILKKGASILAPGVLDADPE IKKEDEVVVLNPAGEVVCCGRARMAGKEMIEEKRGNAVKPRWSAEPAAAKTLEPGRNWEDAVKANEKILDRMIEEAHAFI RDVSGNMNLKVSVSYSGGKDSLAVLQLVDEALDDYEIMFADTGLEFPETLENVSEVAKYYGKPFRTSSAGDSFWESIGVF GPPTMDTRWCCKICKLGPITRLIDENYEGGCLSFIGQRQYESHARSISKRVWKNPWVGNQVGASPIQEWTALHIWLYLFR TKAPYNPAYEKGYDRMGCWLCPSSSLSDFFQLGESHPELAEKLNFHLRAYAKKMGLSPEWVKYGLWRFKRYPKVLQELAD RKGISLLPSQEAPKELNFEVATGYRPCKAGGISADGSFGQAIDIEILEESGMLKPIGKVSFIEGAASVSMGESRAQVFAS GNVNGRSENEKTLKKLMQKVEFSVRRAVLCQGCGVCVGHCEHGAIEMKEKRAWIKDSCTHCGACIEVCPLVKFM >Mature_633_residues SRPAYLGKMLLHWCEACNVPVLGKKCGCGNKTKRVDVTPPGDIRPAFDYDIRRINSISEKQFNAPLIPDDHLVVLNKAPY EDRMDEIIVDGEVIASIRFEIESCEWVLLPRLEGARRLFQGRDRKDLKKWVVIEEEILPFILKKGASILAPGVLDADPEI KKEDEVVVLNPAGEVVCCGRARMAGKEMIEEKRGNAVKPRWSAEPAAAKTLEPGRNWEDAVKANEKILDRMIEEAHAFIR DVSGNMNLKVSVSYSGGKDSLAVLQLVDEALDDYEIMFADTGLEFPETLENVSEVAKYYGKPFRTSSAGDSFWESIGVFG PPTMDTRWCCKICKLGPITRLIDENYEGGCLSFIGQRQYESHARSISKRVWKNPWVGNQVGASPIQEWTALHIWLYLFRT KAPYNPAYEKGYDRMGCWLCPSSSLSDFFQLGESHPELAEKLNFHLRAYAKKMGLSPEWVKYGLWRFKRYPKVLQELADR KGISLLPSQEAPKELNFEVATGYRPCKAGGISADGSFGQAIDIEILEESGMLKPIGKVSFIEGAASVSMGESRAQVFASG NVNGRSENEKTLKKLMQKVEFSVRRAVLCQGCGVCVGHCEHGAIEMKEKRAWIKDSCTHCGACIEVCPLVKFM
Specific function: Unknown
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002500 - InterPro: IPR002478 - InterPro: IPR015947 - InterPro: IPR014729 - InterPro: IPR004521 [H]
Pfam domain/function: PF01507 PAPS_reduct; PF01472 PUA [H]
EC number: NA
Molecular weight: Translated: 71000; Mature: 70869
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: PS50890 PUA ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPAYLGKMLLHWCEACNVPVLGKKCGCGNKTKRVDVTPPGDIRPAFDYDIRRINSISE CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH KQFNAPLIPDDHLVVLNKAPYEDRMDEIIVDGEVIASIRFEIESCEWVLLPRLEGARRLF HHCCCCCCCCCCEEEEECCCCHHHHHHEEECCCEEEEEEEEECCCCEEEECCCHHHHHHH QGRDRKDLKKWVVIEEEILPFILKKGASILAPGVLDADPEIKKEDEVVVLNPAGEVVCCG CCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEEECCCCCEEECC RARMAGKEMIEEKRGNAVKPRWSAEPAAAKTLEPGRNWEDAVKANEKILDRMIEEAHAFI CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RDVSGNMNLKVSVSYSGGKDSLAVLQLVDEALDDYEIMFADTGLEFPETLENVSEVAKYY HHCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHC GKPFRTSSAGDSFWESIGVFGPPTMDTRWCCKICKLGPITRLIDENYEGGCLSFIGQRQY CCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHH ESHARSISKRVWKNPWVGNQVGASPIQEWTALHIWLYLFRTKAPYNPAYEKGYDRMGCWL HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEE CPSSSLSDFFQLGESHPELAEKLNFHLRAYAKKMGLSPEWVKYGLWRFKRYPKVLQELAD CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH RKGISLLPSQEAPKELNFEVATGYRPCKAGGISADGSFGQAIDIEILEESGMLKPIGKVS CCCCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCH FIEGAASVSMGESRAQVFASGNVNGRSENEKTLKKLMQKVEFSVRRAVLCQGCGVCVGHC HHHCHHHHCCCCCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC EHGAIEMKEKRAWIKDSCTHCGACIEVCPLVKFM CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SRPAYLGKMLLHWCEACNVPVLGKKCGCGNKTKRVDVTPPGDIRPAFDYDIRRINSISE CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH KQFNAPLIPDDHLVVLNKAPYEDRMDEIIVDGEVIASIRFEIESCEWVLLPRLEGARRLF HHCCCCCCCCCCEEEEECCCCHHHHHHEEECCCEEEEEEEEECCCCEEEECCCHHHHHHH QGRDRKDLKKWVVIEEEILPFILKKGASILAPGVLDADPEIKKEDEVVVLNPAGEVVCCG CCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCEEEECCCCCEEECC RARMAGKEMIEEKRGNAVKPRWSAEPAAAKTLEPGRNWEDAVKANEKILDRMIEEAHAFI CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH RDVSGNMNLKVSVSYSGGKDSLAVLQLVDEALDDYEIMFADTGLEFPETLENVSEVAKYY HHCCCCCEEEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHC GKPFRTSSAGDSFWESIGVFGPPTMDTRWCCKICKLGPITRLIDENYEGGCLSFIGQRQY CCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHH ESHARSISKRVWKNPWVGNQVGASPIQEWTALHIWLYLFRTKAPYNPAYEKGYDRMGCWL HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCEEE CPSSSLSDFFQLGESHPELAEKLNFHLRAYAKKMGLSPEWVKYGLWRFKRYPKVLQELAD CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH RKGISLLPSQEAPKELNFEVATGYRPCKAGGISADGSFGQAIDIEILEESGMLKPIGKVS CCCCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCH FIEGAASVSMGESRAQVFASGNVNGRSENEKTLKKLMQKVEFSVRRAVLCQGCGVCVGHC HHHCHHHHCCCCCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC EHGAIEMKEKRAWIKDSCTHCGACIEVCPLVKFM CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]