| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226984
Identifier: 21226984
GI number: 21226984
Start: 1041468
End: 1042400
Strand: Direct
Name: 21226984
Synonym: MM_0882
Alternate gene names: NA
Gene position: 1041468-1042400 (Clockwise)
Preceding gene: 21226982
Following gene: 21226985
Centisome position: 25.42
GC content: 42.12
Gene sequence:
>933_bases ATGGCTTCCACCGAAGAACAGCAAACAAACCAGACTAAAGATGCTGCCCAGTTAGAGATGGAGGCTCTAGAGGCTGAAAT GGGTGAGGAAGGAATGAAAAAAGTTGCAGAATACCTGCAGCTGCAAGCCTCTTTGCCGGATGCTGTCAAGGCATCTCCTT ATAGCTCGATTGCCTTTGCCGCGACGGATAACGAGAGCAGGGCTGCTTATATGACTGCAATTGACGAATCTGATCTTAAG AAGGAGGATAAAGAGAAATTAAAGGCTGACCTGCAGGATATATGGGAAAGGTATCCTGATGATTTTAAAGTTGAAGACAA TGAGCCTTTAAAAGTGATTAATGAAATAATGACAAAAAGATTCATTCAAACTCAAAAATCTGCAAGAGAAGCTTCTACCA AAGAGCAAAATACCACCCCAGTTAAAGATGCTGCCCAGTTAAAAATGGAGGCTCTGGAGGCTGAGCTGGGCGAAGAAGGA ATGAAGGAGGTTGCGGATTACCTGGAGCTGCAGGCTTCTTTGCCGGATGTGGTGAAACGTATGCCATATAGAGGGCTTGC TTTTGCTGCTACAGATCCTGAAAGTCAAGATATTACGATGGAATATATTGACAACTTCGATGTTTCTGAGAAGGAAAAAG AGAGGTATAAAGCTCGATTACAGGACATCTGGGACAGGTATCCAGAAAATATCACGGAAGATGACTATGCTTTCATGAGT GAGATAGGTCCAATGGTCGAGAAAGAGTCTTTAAAGAAATATCAGGATCAAAACAATTCAAACAATATTGATTCTGGATC TAATAATGGCAGTAGATCAAATGGCAGTAATTCAGTCGGAAATGAACCGAGCAAAAGTAACTCTGCTCCAGGCTTCGGAT TATTGGGAAGTTTGACCTGCCTGTATGGAGGACGGAAACTTAGAAAAAAATAA
Upstream 100 bases:
>100_bases TTTTGGAACTGAGTCCTGGAGAGAACAGATGAATGCTAAAGATGGAATATTAGTGCTACATGTTGCCATAGTTTTGTGTT TATTCCTGCCGCCATTAGCA
Downstream 100 bases:
>100_bases ACAAGACCTGGATTGAACAAGTATGCTACTTTTTCAGTTCAAATACGCAATTCCTGCTACGGCTACAAAATAAACTCGAT ATTAAGACTTTCTCATAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MASTEEQQTNQTKDAAQLEMEALEAEMGEEGMKKVAEYLQLQASLPDAVKASPYSSIAFAATDNESRAAYMTAIDESDLK KEDKEKLKADLQDIWERYPDDFKVEDNEPLKVINEIMTKRFIQTQKSAREASTKEQNTTPVKDAAQLKMEALEAELGEEG MKEVADYLELQASLPDVVKRMPYRGLAFAATDPESQDITMEYIDNFDVSEKEKERYKARLQDIWDRYPENITEDDYAFMS EIGPMVEKESLKKYQDQNNSNNIDSGSNNGSRSNGSNSVGNEPSKSNSAPGFGLLGSLTCLYGGRKLRKK
Sequences:
>Translated_310_residues MASTEEQQTNQTKDAAQLEMEALEAEMGEEGMKKVAEYLQLQASLPDAVKASPYSSIAFAATDNESRAAYMTAIDESDLK KEDKEKLKADLQDIWERYPDDFKVEDNEPLKVINEIMTKRFIQTQKSAREASTKEQNTTPVKDAAQLKMEALEAELGEEG MKEVADYLELQASLPDVVKRMPYRGLAFAATDPESQDITMEYIDNFDVSEKEKERYKARLQDIWDRYPENITEDDYAFMS EIGPMVEKESLKKYQDQNNSNNIDSGSNNGSRSNGSNSVGNEPSKSNSAPGFGLLGSLTCLYGGRKLRKK >Mature_309_residues ASTEEQQTNQTKDAAQLEMEALEAEMGEEGMKKVAEYLQLQASLPDAVKASPYSSIAFAATDNESRAAYMTAIDESDLKK EDKEKLKADLQDIWERYPDDFKVEDNEPLKVINEIMTKRFIQTQKSAREASTKEQNTTPVKDAAQLKMEALEAELGEEGM KEVADYLELQASLPDVVKRMPYRGLAFAATDPESQDITMEYIDNFDVSEKEKERYKARLQDIWDRYPENITEDDYAFMSE IGPMVEKESLKKYQDQNNSNNIDSGSNNGSRSNGSNSVGNEPSKSNSAPGFGLLGSLTCLYGGRKLRKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34846; Mature: 34715
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASTEEQQTNQTKDAAQLEMEALEAEMGEEGMKKVAEYLQLQASLPDAVKASPYSSIAFA CCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEE ATDNESRAAYMTAIDESDLKKEDKEKLKADLQDIWERYPDDFKVEDNEPLKVINEIMTKR ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH FIQTQKSAREASTKEQNTTPVKDAAQLKMEALEAELGEEGMKEVADYLELQASLPDVVKR HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MPYRGLAFAATDPESQDITMEYIDNFDVSEKEKERYKARLQDIWDRYPENITEDDYAFMS CCCCCEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH EIGPMVEKESLKKYQDQNNSNNIDSGSNNGSRSNGSNSVGNEPSKSNSAPGFGLLGSLTC HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH LYGGRKLRKK HHCCHHHCCC >Mature Secondary Structure ASTEEQQTNQTKDAAQLEMEALEAEMGEEGMKKVAEYLQLQASLPDAVKASPYSSIAFA CCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHCCCCCCEEEE ATDNESRAAYMTAIDESDLKKEDKEKLKADLQDIWERYPDDFKVEDNEPLKVINEIMTKR ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH FIQTQKSAREASTKEQNTTPVKDAAQLKMEALEAELGEEGMKEVADYLELQASLPDVVKR HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MPYRGLAFAATDPESQDITMEYIDNFDVSEKEKERYKARLQDIWDRYPENITEDDYAFMS CCCCCEEEEECCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH EIGPMVEKESLKKYQDQNNSNNIDSGSNNGSRSNGSNSVGNEPSKSNSAPGFGLLGSLTC HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH LYGGRKLRKK HHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA