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The map label for this gene is 21226982

Identifier: 21226982

GI number: 21226982

Start: 1038618

End: 1039397

Strand: Direct

Name: 21226982

Synonym: MM_0880

Alternate gene names: NA

Gene position: 1038618-1039397 (Clockwise)

Preceding gene: 21226981

Following gene: 21226984

Centisome position: 25.35

GC content: 42.44

Gene sequence:

>780_bases
GTGATGCCAACGAAAGGACTCAAATCGATACTCATGCTGGCATTTGTAGCTATAATCCTCTTTGCCTCAGGCTGCACGGA
AGAAAACCTGAGTGCAGAAGAGATTGTAACCCAGATGCTGGACAAACAGAACAGCACTGAAGACTATTCGTATACAATGT
ACATGACCTCCTACGCAGGGGGAAAAACTGCGGAAATCGAATATAAGACCATGTTCAAAAAGCCGAACATGAGTAAAGAC
ATTATAACGGAACCCGGGAAAAAGGATCAGATAATTATTGTTTCGGATGGGGAATTCGCGTGGAGTTACATCCCGGCTAC
GAATGAAGTCATAAAAATGGAGCTTCCCGATATCCCCGAACCTACGAAAAGCGACTGCATCAATGCTATAGGTGAATTCC
TGAATTCTACAAATGTAACACTGCTCAGAGTGGAAAACATAGATGGAAGGACTGCTTACCTGCTGGAGACAAGTTCGAAA
GAAAAAGATGGAGCTTATCCGATGATAAACAGGACAAAAATCTGGGTAGATAAAGAAACATGGATGCCTCTGAGGTATGA
GATGTATGATGGCGATGGAAATCTGACCGCAAAAATCGAAATTCGGGACCTGAAAGTCAACTCCGGAATTCCTGACTCTG
AGTTTAAATTCGAGATTCCGGACGGCGCAGAAGTAAAAACACTGGATATTAAGGAAATCAAATCCTCTGAAAAACTTAAG
GAAATCAAATCCTCTGAAAAACCGAGCCCTGAAGAAGCAAGAGAGAAAACCAGTTTTTGA

Upstream 100 bases:

>100_bases
TTTAGATTTAGCGGGTTTCCTGCCTTCTTTTTATGAATTAAAAAATTACCCATTGAGGGAGGAGTAACGTGATAACAACA
CCCGTTGAAGGAGGAGTAGC

Downstream 100 bases:

>100_bases
AATCCTCATTCCAGAGTACCTGCCTGAAGGTTATTCATTCGACAATTCAATAATTTACAATAACAGCAAATCTTCTTCAA
ATACTGAAAATAGCCGAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MMPTKGLKSILMLAFVAIILFASGCTEENLSAEEIVTQMLDKQNSTEDYSYTMYMTSYAGGKTAEIEYKTMFKKPNMSKD
IITEPGKKDQIIIVSDGEFAWSYIPATNEVIKMELPDIPEPTKSDCINAIGEFLNSTNVTLLRVENIDGRTAYLLETSSK
EKDGAYPMINRTKIWVDKETWMPLRYEMYDGDGNLTAKIEIRDLKVNSGIPDSEFKFEIPDGAEVKTLDIKEIKSSEKLK
EIKSSEKPSPEEAREKTSF

Sequences:

>Translated_259_residues
MMPTKGLKSILMLAFVAIILFASGCTEENLSAEEIVTQMLDKQNSTEDYSYTMYMTSYAGGKTAEIEYKTMFKKPNMSKD
IITEPGKKDQIIIVSDGEFAWSYIPATNEVIKMELPDIPEPTKSDCINAIGEFLNSTNVTLLRVENIDGRTAYLLETSSK
EKDGAYPMINRTKIWVDKETWMPLRYEMYDGDGNLTAKIEIRDLKVNSGIPDSEFKFEIPDGAEVKTLDIKEIKSSEKLK
EIKSSEKPSPEEAREKTSF
>Mature_259_residues
MMPTKGLKSILMLAFVAIILFASGCTEENLSAEEIVTQMLDKQNSTEDYSYTMYMTSYAGGKTAEIEYKTMFKKPNMSKD
IITEPGKKDQIIIVSDGEFAWSYIPATNEVIKMELPDIPEPTKSDCINAIGEFLNSTNVTLLRVENIDGRTAYLLETSSK
EKDGAYPMINRTKIWVDKETWMPLRYEMYDGDGNLTAKIEIRDLKVNSGIPDSEFKFEIPDGAEVKTLDIKEIKSSEKLK
EIKSSEKPSPEEAREKTSF

Specific function: Unknown

COG id: COG2834

COG function: function code M; Outer membrane lipoprotein-sorting protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004564 [H]

Pfam domain/function: PF03548 LolA [H]

EC number: NA

Molecular weight: Translated: 29285; Mature: 29285

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPTKGLKSILMLAFVAIILFASGCTEENLSAEEIVTQMLDKQNSTEDYSYTMYMTSYAG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCC
GKTAEIEYKTMFKKPNMSKDIITEPGKKDQIIIVSDGEFAWSYIPATNEVIKMELPDIPE
CCEEEEEEEEEECCCCCCHHHHCCCCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCC
PTKSDCINAIGEFLNSTNVTLLRVENIDGRTAYLLETSSKEKDGAYPMINRTKIWVDKET
CCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCC
WMPLRYEMYDGDGNLTAKIEIRDLKVNSGIPDSEFKFEIPDGAEVKTLDIKEIKSSEKLK
CCEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHH
EIKSSEKPSPEEAREKTSF
HHHHCCCCCHHHHHHHCCC
>Mature Secondary Structure
MMPTKGLKSILMLAFVAIILFASGCTEENLSAEEIVTQMLDKQNSTEDYSYTMYMTSYAG
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCC
GKTAEIEYKTMFKKPNMSKDIITEPGKKDQIIIVSDGEFAWSYIPATNEVIKMELPDIPE
CCEEEEEEEEEECCCCCCHHHHCCCCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCC
PTKSDCINAIGEFLNSTNVTLLRVENIDGRTAYLLETSSKEKDGAYPMINRTKIWVDKET
CCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCC
WMPLRYEMYDGDGNLTAKIEIRDLKVNSGIPDSEFKFEIPDGAEVKTLDIKEIKSSEKLK
CCEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHH
EIKSSEKPSPEEAREKTSF
HHHHCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]