| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226978
Identifier: 21226978
GI number: 21226978
Start: 1035461
End: 1036198
Strand: Direct
Name: 21226978
Synonym: MM_0876
Alternate gene names: NA
Gene position: 1035461-1036198 (Clockwise)
Preceding gene: 21226977
Following gene: 21226979
Centisome position: 25.28
GC content: 37.8
Gene sequence:
>738_bases ATGAAGAAACTTAAAATAAGTGCATTGTTTATGGCAGTACTTCTTGTAAGTGTTGCTTTTGTTCCGGCTGTGAGTGCACA GGCCGGATCGCAAAATAAAGAGTATGTTGATGCGATAGACATTTCGAACAACATCCCAATTTCTGAAGAGGACCTCAAAA AAGCAATGGAAAAAGTGAGTGAAACATCAAAAAACATGAATGTATTGAAAGAAACCGATAAAGAAAAGATAGTATCTTTC AAAAAAGATGATGGATCAATTGCATACGTGATTTCATGGGCAGATGAAAAGAATCCTAATAGAACAAATTTTGCTTTTGT GGATCAGAGTGAATTAGTATCCAAAAAACTCATATCTACTGCAAGTCTAAATGATAGTTCGGCAGTTGCAACAGTAATTT CTGCCGCTAAGGTAAGTTTTTGGAATGGAAGTTATCTTGAAACATATGGATCTGCAACAACAGGTGGGGTGCATATTCAT TTCTCGGCAAAAGATGGGCTCTGGCTTGCTGGTGGTGCTGCAACTGCTGCTGTACTTCTTGGAATAATACTCGATGGACC GTTGCCTTTTGGTGATGCAATAGGCGCTTTGGTGGCTTTTGGAATAGCAACATTTTATTGGGCAGAATCAAATTCTGACA ATAGTATAGACGTTAGTATACCTTATGCAAATGCGCTCCAATATCCATTAACAGGCCATGTTAGTATGAAAATTGGTTCA CATTGGTACACAATTTAA
Upstream 100 bases:
>100_bases ATTGCAGACTTGAAAGGAGCATGAAAAATCATCAGTTTGATGATCTGGCTAGAAAAATTTATAAGGAGTGAACAAAGAGT AATTAAACAGGAGTGAAATT
Downstream 100 bases:
>100_bases CCAATTTAATTAACCATTTGGCTGATATTATAATCAGCCTGGCTGATATTACAATCAGCCAAATTTAATTTAGAGGGATA TTATGGAAAAAAAGAACATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MKKLKISALFMAVLLVSVAFVPAVSAQAGSQNKEYVDAIDISNNIPISEEDLKKAMEKVSETSKNMNVLKETDKEKIVSF KKDDGSIAYVISWADEKNPNRTNFAFVDQSELVSKKLISTASLNDSSAVATVISAAKVSFWNGSYLETYGSATTGGVHIH FSAKDGLWLAGGAATAAVLLGIILDGPLPFGDAIGALVAFGIATFYWAESNSDNSIDVSIPYANALQYPLTGHVSMKIGS HWYTI
Sequences:
>Translated_245_residues MKKLKISALFMAVLLVSVAFVPAVSAQAGSQNKEYVDAIDISNNIPISEEDLKKAMEKVSETSKNMNVLKETDKEKIVSF KKDDGSIAYVISWADEKNPNRTNFAFVDQSELVSKKLISTASLNDSSAVATVISAAKVSFWNGSYLETYGSATTGGVHIH FSAKDGLWLAGGAATAAVLLGIILDGPLPFGDAIGALVAFGIATFYWAESNSDNSIDVSIPYANALQYPLTGHVSMKIGS HWYTI >Mature_245_residues MKKLKISALFMAVLLVSVAFVPAVSAQAGSQNKEYVDAIDISNNIPISEEDLKKAMEKVSETSKNMNVLKETDKEKIVSF KKDDGSIAYVISWADEKNPNRTNFAFVDQSELVSKKLISTASLNDSSAVATVISAAKVSFWNGSYLETYGSATTGGVHIH FSAKDGLWLAGGAATAAVLLGIILDGPLPFGDAIGALVAFGIATFYWAESNSDNSIDVSIPYANALQYPLTGHVSMKIGS HWYTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26209; Mature: 26209
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLKISALFMAVLLVSVAFVPAVSAQAGSQNKEYVDAIDISNNIPISEEDLKKAMEKVS CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH ETSKNMNVLKETDKEKIVSFKKDDGSIAYVISWADEKNPNRTNFAFVDQSELVSKKLIST HHHHHHHHHHHCCHHHHEEEECCCCCEEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHH ASLNDSSAVATVISAAKVSFWNGSYLETYGSATTGGVHIHFSAKDGLWLAGGAATAAVLL CCCCCCHHHHHHHHHHHEEECCCCHHHHCCCCCCCCEEEEEECCCCEEEECCHHHHHHHH GIILDGPLPFGDAIGALVAFGIATFYWAESNSDNSIDVSIPYANALQYPLTGHVSMKIGS HHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCHHHCCCCCCCEEEEEECC HWYTI EEECC >Mature Secondary Structure MKKLKISALFMAVLLVSVAFVPAVSAQAGSQNKEYVDAIDISNNIPISEEDLKKAMEKVS CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHH ETSKNMNVLKETDKEKIVSFKKDDGSIAYVISWADEKNPNRTNFAFVDQSELVSKKLIST HHHHHHHHHHHCCHHHHEEEECCCCCEEEEEEECCCCCCCCCEEEEECHHHHHHHHHHHH ASLNDSSAVATVISAAKVSFWNGSYLETYGSATTGGVHIHFSAKDGLWLAGGAATAAVLL CCCCCCHHHHHHHHHHHEEECCCCHHHHCCCCCCCCEEEEEECCCCEEEECCHHHHHHHH GIILDGPLPFGDAIGALVAFGIATFYWAESNSDNSIDVSIPYANALQYPLTGHVSMKIGS HHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCEEEEEECCHHHCCCCCCCEEEEEECC HWYTI EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA