BacMap

Definition	Methanosarcina mazei Go1 chromosome, complete genome.
Accession	NC_003901
Length	4,096,345

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The map label for this gene is cdc48 [C]

Identifier: 21226956

GI number: 21226956

Start: 1007852

End: 1009138

Strand: Reverse

Name: cdc48 [C]

Synonym: MM_0854

Alternate gene names: 21226956

Gene position: 1009138-1007852 (Counterclockwise)

Preceding gene: 21226958

Following gene: 21226955

Centisome position: 24.64

GC content: 45.38

Gene sequence:

>1287_bases
ATGTCAGGCATGATACTAGACATCGTAGAACTACTGCTCACCGCAGAGATCTATAACCGCTATCCGGAACTGGATGTTAA
TGATCTTCCCAAAAACATCCGTAAAAGTTACTGGAGCAGCGTGGAAAAAACAGTTCCCAAACCCATAATAGCTTCATTTG
TCAGGATCGAAAAACTATATGGGGTCAAAGATATCGAAAAAACCGTAAGGAATATACCTTTTATAAATATTGACAGGTCT
CATTTTGAACTCCGTTTGAGCGCTTTTGACCTTGCAGCCGAATGGTTTGAGAAACAGGAAGGTTCTCAGGAAAAAATTGA
AAATAACCCTGTCCTTGCTTACTATTTTGGGGAAATCCGAAAGGTTGAAGCTGCAGATTATGCCGCAGCAAAGGCAAAAA
TAAGGCCAAAAGAAGTTGACCGGGAATGGATAGAGTCCCTGATAGCTGAAATCAGGAAAGAAGACAAGAGCGAGGAGATG
CTCAAGCTTGTTGTCATTATCGCTCCTGAAGACGTCAAACAGAAAGTCAGGGACCTTGTGCTCACTGAGGAGCAAAAGGA
TGAAATCGAAAAAATCATGAAAGCTATCCAGCACAGGGAATACCTGTGGGAGATAGGGCTGCATGATATAGGAAAACTCC
TCTTTGTAGGTCCCCCTGGCACAGGCAAAACCTCAGTTGCCCGTGCACTCTCGGAACAGCTCTCCATTCCTTTTGTTGAG
GTCAAGCTCTCAATGATCACAGACCAGTACCTGGGCGAGACTGCAAAGAACATAGACCGCGTTTTCCTGCTTGCTAAGAA
ATTAAATCCCTGTATCCTCTTCATAGATGAACTGGACTTTGTTGCAAAAGCCAGGACTTCTGACGAAAATGCCGCAATCA
AAAGGGCAGTCAATACCCTCCTCAAAGCCATAGATGAAATTAGCCTTGTAGAACACGGCGTGCTCCTTATTGCTGCAACA
AACCACCCCAGAATGCTTGACAGCGCGGCATGGAGGCGTTTTGATGAAATTGTCCATTTCCCACTTCCTGACCTTGATAT
GCGCAAAAATATCCTGGACATAGTAACCAGGCATATAGAAGGAGACCTGGATACCGCAGAGATTGCGGCACTGACTGAAG
GTTATTCGGGTTCTGATTTGCGCATGGTTATAAGGGAAGCTGTCCTGAGTGCTCTTCTCGAGGAACGCAAGGTCCTTACC
CAGAAGGACCTGCTTGACGCGGTTAATTCCTTTGACGAACGGGCAGACTTAAAGTCCGATGAGTACGCAGGGAAGAAATC
CTCATGA

Upstream 100 bases:

>100_bases
TTACTAGGTTTAGCAACTTAAAAAAAGATTTAAGAACTTTCTGCTCTGGATGTATACTACCTGATGGTAGTCTAATCTAA
GTATGCAATGGGTAAAAAAC

Downstream 100 bases:

>100_bases
GACTGACTCTGCTCGGAACCGGGGACGCGGTAGGTACGCCCAAAATCGGGTGTAACTGCCCCGCATGCACTGATGCTCGT
GAAGGTGGAAAGAGCCAGCG

Product: cell division cycle protein 48-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MSGMILDIVELLLTAEIYNRYPELDVNDLPKNIRKSYWSSVEKTVPKPIIASFVRIEKLYGVKDIEKTVRNIPFINIDRS
HFELRLSAFDLAAEWFEKQEGSQEKIENNPVLAYYFGEIRKVEAADYAAAKAKIRPKEVDREWIESLIAEIRKEDKSEEM
LKLVVIIAPEDVKQKVRDLVLTEEQKDEIEKIMKAIQHREYLWEIGLHDIGKLLFVGPPGTGKTSVARALSEQLSIPFVE
VKLSMITDQYLGETAKNIDRVFLLAKKLNPCILFIDELDFVAKARTSDENAAIKRAVNTLLKAIDEISLVEHGVLLIAAT
NHPRMLDSAAWRRFDEIVHFPLPDLDMRKNILDIVTRHIEGDLDTAEIAALTEGYSGSDLRMVIREAVLSALLEERKVLT
QKDLLDAVNSFDERADLKSDEYAGKKSS

Sequences:

>Translated_428_residues
MSGMILDIVELLLTAEIYNRYPELDVNDLPKNIRKSYWSSVEKTVPKPIIASFVRIEKLYGVKDIEKTVRNIPFINIDRS
HFELRLSAFDLAAEWFEKQEGSQEKIENNPVLAYYFGEIRKVEAADYAAAKAKIRPKEVDREWIESLIAEIRKEDKSEEM
LKLVVIIAPEDVKQKVRDLVLTEEQKDEIEKIMKAIQHREYLWEIGLHDIGKLLFVGPPGTGKTSVARALSEQLSIPFVE
VKLSMITDQYLGETAKNIDRVFLLAKKLNPCILFIDELDFVAKARTSDENAAIKRAVNTLLKAIDEISLVEHGVLLIAAT
NHPRMLDSAAWRRFDEIVHFPLPDLDMRKNILDIVTRHIEGDLDTAEIAALTEGYSGSDLRMVIREAVLSALLEERKVLT
QKDLLDAVNSFDERADLKSDEYAGKKSS
>Mature_427_residues
SGMILDIVELLLTAEIYNRYPELDVNDLPKNIRKSYWSSVEKTVPKPIIASFVRIEKLYGVKDIEKTVRNIPFINIDRSH
FELRLSAFDLAAEWFEKQEGSQEKIENNPVLAYYFGEIRKVEAADYAAAKAKIRPKEVDREWIESLIAEIRKEDKSEEML
KLVVIIAPEDVKQKVRDLVLTEEQKDEIEKIMKAIQHREYLWEIGLHDIGKLLFVGPPGTGKTSVARALSEQLSIPFVEV
KLSMITDQYLGETAKNIDRVFLLAKKLNPCILFIDELDFVAKARTSDENAAIKRAVNTLLKAIDEISLVEHGVLLIAATN
HPRMLDSAAWRRFDEIVHFPLPDLDMRKNILDIVTRHIEGDLDTAEIAALTEGYSGSDLRMVIREAVLSALLEERKVLTQ
KDLLDAVNSFDERADLKSDEYAGKKSS

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family [H]

Homologues:

Organism=Homo sapiens, GI195539395, Length=248, Percent_Identity=35.4838709677419, Blast_Score=138, Evalue=8e-33,
Organism=Homo sapiens, GI4506209, Length=234, Percent_Identity=32.9059829059829, Blast_Score=128, Evalue=8e-30,
Organism=Homo sapiens, GI6005942, Length=219, Percent_Identity=32.8767123287671, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI21327685, Length=227, Percent_Identity=35.2422907488987, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI7657689, Length=227, Percent_Identity=35.2422907488987, Blast_Score=122, Evalue=5e-28,
Organism=Homo sapiens, GI5901990, Length=201, Percent_Identity=36.318407960199, Blast_Score=122, Evalue=6e-28,
Organism=Homo sapiens, GI21361144, Length=226, Percent_Identity=31.4159292035398, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI14149767, Length=189, Percent_Identity=37.5661375661376, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI62177112, Length=189, Percent_Identity=37.5661375661376, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI24497435, Length=234, Percent_Identity=32.0512820512821, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI7019569, Length=192, Percent_Identity=35.9375, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI17865802, Length=192, Percent_Identity=34.375, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI4505725, Length=184, Percent_Identity=33.695652173913, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI45643123, Length=213, Percent_Identity=31.924882629108, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI45643125, Length=213, Percent_Identity=31.924882629108, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI300192933, Length=250, Percent_Identity=30.8, Blast_Score=115, Evalue=8e-26,
Organism=Homo sapiens, GI31377644, Length=187, Percent_Identity=35.8288770053476, Blast_Score=114, Evalue=1e-25,
Organism=Homo sapiens, GI157671927, Length=206, Percent_Identity=33.495145631068, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI5729991, Length=227, Percent_Identity=31.2775330396476, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI89064750, Length=227, Percent_Identity=31.2775330396476, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI24430155, Length=227, Percent_Identity=31.2775330396476, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI229577436, Length=252, Percent_Identity=32.1428571428571, Blast_Score=109, Evalue=4e-24,
Organism=Homo sapiens, GI24430151, Length=251, Percent_Identity=32.2709163346614, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI40806170, Length=186, Percent_Identity=34.9462365591398, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI11875211, Length=186, Percent_Identity=34.9462365591398, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI24497618, Length=191, Percent_Identity=38.2198952879581, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI31742536, Length=186, Percent_Identity=31.7204301075269, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI112789543, Length=186, Percent_Identity=31.7204301075269, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI153792536, Length=191, Percent_Identity=37.696335078534, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI4507173, Length=228, Percent_Identity=28.9473684210526, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI64084766, Length=213, Percent_Identity=29.1079812206573, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI226371754, Length=188, Percent_Identity=32.4468085106383, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI194018488, Length=212, Percent_Identity=33.0188679245283, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI156564401, Length=222, Percent_Identity=30.6306306306306, Blast_Score=86, Evalue=1e-16,
Organism=Homo sapiens, GI310125280, Length=222, Percent_Identity=30.6306306306306, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI310125282, Length=222, Percent_Identity=30.6306306306306, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI116292174, Length=277, Percent_Identity=28.8808664259928, Blast_Score=82, Evalue=8e-16,
Organism=Escherichia coli, GI1789568, Length=241, Percent_Identity=32.7800829875519, Blast_Score=130, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17563248, Length=234, Percent_Identity=34.1880341880342, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71987372, Length=218, Percent_Identity=36.697247706422, Blast_Score=129, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI71987364, Length=218, Percent_Identity=36.697247706422, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI17532375, Length=231, Percent_Identity=33.3333333333333, Blast_Score=127, Evalue=9e-30,
Organism=Caenorhabditis elegans, GI71994521, Length=253, Percent_Identity=31.6205533596838, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17508701, Length=226, Percent_Identity=30.9734513274336, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI86561515, Length=186, Percent_Identity=35.4838709677419, Blast_Score=119, Evalue=4e-27,
Organism=Caenorhabditis elegans, GI17554786, Length=235, Percent_Identity=31.9148936170213, Blast_Score=118, Evalue=6e-27,
Organism=Caenorhabditis elegans, GI17554264, Length=218, Percent_Identity=34.4036697247706, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17541224, Length=180, Percent_Identity=34.4444444444444, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17541226, Length=180, Percent_Identity=34.4444444444444, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI25144278, Length=232, Percent_Identity=31.4655172413793, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI25144281, Length=232, Percent_Identity=31.4655172413793, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17537217, Length=189, Percent_Identity=35.4497354497354, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17531535, Length=232, Percent_Identity=32.3275862068966, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17508053, Length=224, Percent_Identity=33.4821428571429, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17562804, Length=226, Percent_Identity=31.858407079646, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI115534323, Length=261, Percent_Identity=29.5019157088123, Blast_Score=108, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI193206114, Length=192, Percent_Identity=38.5416666666667, Blast_Score=107, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI133931034, Length=192, Percent_Identity=38.5416666666667, Blast_Score=107, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI193206116, Length=192, Percent_Identity=38.5416666666667, Blast_Score=107, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI17554784, Length=227, Percent_Identity=32.5991189427313, Blast_Score=107, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI25153574, Length=242, Percent_Identity=31.404958677686, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI193209502, Length=242, Percent_Identity=31.404958677686, Blast_Score=104, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17563250, Length=228, Percent_Identity=31.5789473684211, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17560432, Length=186, Percent_Identity=33.8709677419355, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI17508421, Length=208, Percent_Identity=34.6153846153846, Blast_Score=101, Evalue=9e-22,
Organism=Caenorhabditis elegans, GI32563584, Length=188, Percent_Identity=35.6382978723404, Blast_Score=101, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI25146157, Length=201, Percent_Identity=34.8258706467662, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17505546, Length=245, Percent_Identity=30.2040816326531, Blast_Score=98, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI133901662, Length=213, Percent_Identity=30.0469483568075, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI133901658, Length=213, Percent_Identity=30.0469483568075, Blast_Score=82, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI71990294, Length=211, Percent_Identity=31.7535545023697, Blast_Score=74, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6324000, Length=306, Percent_Identity=32.3529411764706, Blast_Score=135, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6320077, Length=223, Percent_Identity=35.4260089686099, Blast_Score=127, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6325431, Length=204, Percent_Identity=34.3137254901961, Blast_Score=127, Evalue=3e-30,
Organism=Saccharomyces cerevisiae, GI6325183, Length=194, Percent_Identity=38.1443298969072, Blast_Score=127, Evalue=5e-30,
Organism=Saccharomyces cerevisiae, GI6322704, Length=234, Percent_Identity=34.1880341880342, Blast_Score=124, Evalue=2e-29,
Organism=Saccharomyces cerevisiae, GI6324833, Length=240, Percent_Identity=32.9166666666667, Blast_Score=121, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6321390, Length=264, Percent_Identity=29.5454545454545, Blast_Score=117, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6323429, Length=227, Percent_Identity=32.15859030837, Blast_Score=117, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6321465, Length=186, Percent_Identity=38.7096774193548, Blast_Score=117, Evalue=3e-27,
Organism=Saccharomyces cerevisiae, GI6321709, Length=188, Percent_Identity=40.9574468085106, Blast_Score=116, Evalue=5e-27,
Organism=Saccharomyces cerevisiae, GI6322994, Length=212, Percent_Identity=33.4905660377358, Blast_Score=116, Evalue=5e-27,
Organism=Saccharomyces cerevisiae, GI6325281, Length=241, Percent_Identity=33.6099585062241, Blast_Score=116, Evalue=9e-27,
Organism=Saccharomyces cerevisiae, GI6324691, Length=233, Percent_Identity=32.1888412017167, Blast_Score=115, Evalue=9e-27,
Organism=Saccharomyces cerevisiae, GI6323736, Length=232, Percent_Identity=33.1896551724138, Blast_Score=115, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6320887, Length=234, Percent_Identity=33.7606837606838, Blast_Score=111, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6322651, Length=193, Percent_Identity=33.6787564766839, Blast_Score=107, Evalue=5e-24,
Organism=Saccharomyces cerevisiae, GI6320854, Length=241, Percent_Identity=28.6307053941909, Blast_Score=102, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6320197, Length=238, Percent_Identity=31.9327731092437, Blast_Score=99, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6320602, Length=234, Percent_Identity=32.4786324786325, Blast_Score=93, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6319554, Length=204, Percent_Identity=32.843137254902, Blast_Score=85, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24640100, Length=248, Percent_Identity=35.4838709677419, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI281365776, Length=221, Percent_Identity=33.4841628959276, Blast_Score=128, Evalue=6e-30,
Organism=Drosophila melanogaster, GI24660075, Length=221, Percent_Identity=33.4841628959276, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI45552965, Length=221, Percent_Identity=33.4841628959276, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI24663015, Length=225, Percent_Identity=35.1111111111111, Blast_Score=128, Evalue=7e-30,
Organism=Drosophila melanogaster, GI161076488, Length=223, Percent_Identity=32.7354260089686, Blast_Score=128, Evalue=1e-29,
Organism=Drosophila melanogaster, GI161076486, Length=236, Percent_Identity=31.7796610169492, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI17137560, Length=236, Percent_Identity=31.7796610169492, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI18859657, Length=194, Percent_Identity=37.6288659793814, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI20129423, Length=279, Percent_Identity=29.7491039426523, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI17137738, Length=233, Percent_Identity=33.4763948497854, Blast_Score=126, Evalue=3e-29,
Organism=Drosophila melanogaster, GI20129529, Length=312, Percent_Identity=30.7692307692308, Blast_Score=125, Evalue=5e-29,
Organism=Drosophila melanogaster, GI28574878, Length=258, Percent_Identity=29.8449612403101, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24665814, Length=249, Percent_Identity=30.5220883534137, Blast_Score=124, Evalue=2e-28,
Organism=Drosophila melanogaster, GI17738151, Length=227, Percent_Identity=32.5991189427313, Blast_Score=122, Evalue=5e-28,
Organism=Drosophila melanogaster, GI24652279, Length=200, Percent_Identity=34.5, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24581396, Length=186, Percent_Identity=36.5591397849462, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24658770, Length=244, Percent_Identity=31.1475409836066, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI281360142, Length=186, Percent_Identity=37.0967741935484, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI21357333, Length=186, Percent_Identity=37.0967741935484, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI281360146, Length=186, Percent_Identity=37.0967741935484, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI281360138, Length=186, Percent_Identity=37.0967741935484, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI281360144, Length=186, Percent_Identity=37.0967741935484, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI281360140, Length=186, Percent_Identity=37.0967741935484, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI281360136, Length=186, Percent_Identity=37.0967741935484, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24644411, Length=186, Percent_Identity=37.0967741935484, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI18860063, Length=227, Percent_Identity=32.5991189427313, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24651451, Length=234, Percent_Identity=31.1965811965812, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI19920408, Length=234, Percent_Identity=31.1965811965812, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI28571849, Length=187, Percent_Identity=36.3636363636364, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI28571847, Length=187, Percent_Identity=36.3636363636364, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI21355121, Length=192, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI19921202, Length=204, Percent_Identity=32.3529411764706, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24649446, Length=222, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI24644145, Length=186, Percent_Identity=34.9462365591398, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI281361487, Length=227, Percent_Identity=30.8370044052863, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24656825, Length=211, Percent_Identity=31.2796208530806, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24656820, Length=212, Percent_Identity=31.1320754716981, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI24639391, Length=258, Percent_Identity=30.6201550387597, Blast_Score=108, Evalue=1e-23,
Organism=Drosophila melanogaster, GI281363136, Length=282, Percent_Identity=29.4326241134752, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI78707192, Length=282, Percent_Identity=29.4326241134752, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI17864540, Length=213, Percent_Identity=34.7417840375587, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28573010, Length=213, Percent_Identity=34.7417840375587, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24639486, Length=226, Percent_Identity=27.4336283185841, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI45554047, Length=171, Percent_Identity=29.2397660818713, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR003959 [H]

Pfam domain/function: PF00004 AAA [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 48791; Mature: 48660

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: PS00674 AAA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGMILDIVELLLTAEIYNRYPELDVNDLPKNIRKSYWSSVEKTVPKPIIASFVRIEKLY
CCCHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GVKDIEKTVRNIPFINIDRSHFELRLSAFDLAAEWFEKQEGSQEKIENNPVLAYYFGEIR
CHHHHHHHHHHCCEEEECCHHHHEEHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEECCHH
KVEAADYAAAKAKIRPKEVDREWIESLIAEIRKEDKSEEMLKLVVIIAPEDVKQKVRDLV
HHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCHHHHEEEEEEECCHHHHHHHHHHH
LTEEQKDEIEKIMKAIQHREYLWEIGLHDIGKLLFVGPPGTGKTSVARALSEQLSIPFVE
HCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCHHH
VKLSMITDQYLGETAKNIDRVFLLAKKLNPCILFIDELDFVAKARTSDENAAIKRAVNTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHH
LKAIDEISLVEHGVLLIAATNHPRMLDSAAWRRFDEIVHFPLPDLDMRKNILDIVTRHIE
HHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
GDLDTAEIAALTEGYSGSDLRMVIREAVLSALLEERKVLTQKDLLDAVNSFDERADLKSD
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
EYAGKKSS
CCCCCCCC
>Mature Secondary Structure 
SGMILDIVELLLTAEIYNRYPELDVNDLPKNIRKSYWSSVEKTVPKPIIASFVRIEKLY
CCHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
GVKDIEKTVRNIPFINIDRSHFELRLSAFDLAAEWFEKQEGSQEKIENNPVLAYYFGEIR
CHHHHHHHHHHCCEEEECCHHHHEEHHHHHHHHHHHHHCCCCHHHHCCCCEEEEEECCHH
KVEAADYAAAKAKIRPKEVDREWIESLIAEIRKEDKSEEMLKLVVIIAPEDVKQKVRDLV
HHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCHHHHEEEEEEECCHHHHHHHHHHH
LTEEQKDEIEKIMKAIQHREYLWEIGLHDIGKLLFVGPPGTGKTSVARALSEQLSIPFVE
HCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCEEEECCCCCCHHHHHHHHHHHHCCCHHH
VKLSMITDQYLGETAKNIDRVFLLAKKLNPCILFIDELDFVAKARTSDENAAIKRAVNTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHCCCCHHHHHHHHHHHH
LKAIDEISLVEHGVLLIAATNHPRMLDSAAWRRFDEIVHFPLPDLDMRKNILDIVTRHIE
HHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC
GDLDTAEIAALTEGYSGSDLRMVIREAVLSALLEERKVLTQKDLLDAVNSFDERADLKSD
CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
EYAGKKSS
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]