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The map label for this gene is yhhG [C]

Identifier: 21226944

GI number: 21226944

Start: 997812

End: 998315

Strand: Reverse

Name: yhhG [C]

Synonym: MM_0842

Alternate gene names: 21226944

Gene position: 998315-997812 (Counterclockwise)

Preceding gene: 21226945

Following gene: 21226940

Centisome position: 24.37

GC content: 39.09

Gene sequence:

>504_bases
GTGAAAAAAACATATATAGTATTACATACAATAAGTTTATGTAATATCATTCGGATAAATTACAAATTACTTGGTGATAC
GATGGAAACAGAACTTATGAGGATAGGAGTCTCCCTACCCGACACACTTCTTAGTAAATTTGATGAGATTATTGAAAAAA
GAGGTTACTCTTCCCGTTCGGAAGGCATAAGGGACGCCATCAGGAGTTATATTTCTTATTACGAGTGGATGGGTGACATT
AAAGGTCACCGTGTAGGTACTGTTGCCGTTATTTACGACCACACCAAGCGCGGGCTTTCCAATGCACTTGCAGATATACA
GCACCACTACTCTCACCTGATTAAGTCTTCCGTACACATCCACCTTGACCACGATAATTGTTTTGAGGTTGTTGTTCTTG
ATGGTGATGGCGAGGAAATCAAAGAACTTGCCGAAGCCATTATGTCACTCAAAGGCGTAAAATTCTCAAAACTTACTACT
GTAGCCTCAAATGAAAAGATTTAA

Upstream 100 bases:

>100_bases
CTTATCCTTTTAATCTATATCGAATTTGACAATTCCCAAACATTAATATACTGAAGGATGAATTTACATACCGACACAAC
TCTTTTATATTAATGATCAA

Downstream 100 bases:

>100_bases
TTTTATCTTTCAGGGATGAAAATCTCTGAAAAGATAGTATTGCTCAGGAAGAGGGACATAAATCTTTTTTAACGGGTAAA
AGTCCCTCAATTCCTTATTA

Product: nickel responsive regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKKTYIVLHTISLCNIIRINYKLLGDTMETELMRIGVSLPDTLLSKFDEIIEKRGYSSRSEGIRDAIRSYISYYEWMGDI
KGHRVGTVAVIYDHTKRGLSNALADIQHHYSHLIKSSVHIHLDHDNCFEVVVLDGDGEEIKELAEAIMSLKGVKFSKLTT
VASNEKI

Sequences:

>Translated_167_residues
MKKTYIVLHTISLCNIIRINYKLLGDTMETELMRIGVSLPDTLLSKFDEIIEKRGYSSRSEGIRDAIRSYISYYEWMGDI
KGHRVGTVAVIYDHTKRGLSNALADIQHHYSHLIKSSVHIHLDHDNCFEVVVLDGDGEEIKELAEAIMSLKGVKFSKLTT
VASNEKI
>Mature_167_residues
MKKTYIVLHTISLCNIIRINYKLLGDTMETELMRIGVSLPDTLLSKFDEIIEKRGYSSRSEGIRDAIRSYISYYEWMGDI
KGHRVGTVAVIYDHTKRGLSNALADIQHHYSHLIKSSVHIHLDHDNCFEVVVLDGDGEEIKELAEAIMSLKGVKFSKLTT
VASNEKI

Specific function: Transcriptional regulator (Potential) [H]

COG id: COG0864

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory CopG/NikR family [H]

Homologues:

Organism=Escherichia coli, GI1789892, Length=114, Percent_Identity=30.7017543859649, Blast_Score=78, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013321
- InterPro:   IPR002145
- InterPro:   IPR022988
- InterPro:   IPR010985
- InterPro:   IPR014864 [H]

Pfam domain/function: PF08753 NikR_C; PF01402 RHH_1 [H]

EC number: NA

Molecular weight: Translated: 18967; Mature: 18967

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTYIVLHTISLCNIIRINYKLLGDTMETELMRIGVSLPDTLLSKFDEIIEKRGYSSRS
CCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHH
EGIRDAIRSYISYYEWMGDIKGHRVGTVAVIYDHTKRGLSNALADIQHHYSHLIKSSVHI
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEE
HLDHDNCFEVVVLDGDGEEIKELAEAIMSLKGVKFSKLTTVASNEKI
EECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHEECCCCCCC
>Mature Secondary Structure
MKKTYIVLHTISLCNIIRINYKLLGDTMETELMRIGVSLPDTLLSKFDEIIEKRGYSSRS
CCCEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHH
EGIRDAIRSYISYYEWMGDIKGHRVGTVAVIYDHTKRGLSNALADIQHHYSHLIKSSVHI
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEEE
HLDHDNCFEVVVLDGDGEEIKELAEAIMSLKGVKFSKLTTVASNEKI
EECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12125824 [H]