BacMap

Definition	Methanosarcina mazei Go1 chromosome, complete genome.
Accession	NC_003901
Length	4,096,345

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The map label for this gene is betB [H]

Identifier: 21226940

GI number: 21226940

Start: 990958

End: 992397

Strand: Reverse

Name: betB [H]

Synonym: MM_0838

Alternate gene names: 21226940

Gene position: 992397-990958 (Counterclockwise)

Preceding gene: 21226944

Following gene: 21226937

Centisome position: 24.23

GC content: 49.38

Gene sequence:

>1440_bases
ATGGTAGCCATGAAAATGCAGATTAATGGAAAAGCGGCAGGATCATGTGGCGGCGAGTGCTTTGACGTTAGAAATCCTGC
AACATGCGAACTTCTTGAGCAGGTCCCGAGAGGCACGGAAGAGGATGTTGCCCTTGCGGTAGAAGCCGCTTTATCAGCTT
TTGAAGGCTGGGCTTCTATCTCTCCACAGCAGAGAGGCATGGTTTTTTACAGGGCTGCCGGGCTTGTAAGGCAGAGGAAG
GAGGAGCTTGCTGCCCTGCTCACACAGGAACAGGGGAAGCCTCTTGCAGAAGCCAGAAACGAACTGGAAGGCTTCTCGCA
TGTGCTTGAATACTACTGCGGGCTTGCAGGCAGTTTGAGGGGTGACTTTATCCCTGTTACGGGAAATGGCTATTCTTTTA
CCGTAAAAAAACCTCTGGGTGTCTGTGCAGCCATCATCCCCTGGAACATGCCTGCCCTGATTATGGGGTGGAAAATTGCA
CCTGCCCTTATTTCAGGCAACACTTTTGTGCTAAAACCTGCAAGCAGCACTCCCCTCACAAACCTCACCCTGGCTTCTAT
CCTGAATGAAGCCGGTCTTCCAGCAGGAGTCCTGAACGTTGTCACAGGCTCTGGAGAGATTGCAGGAGAAAGCCTTGTCC
GCAGCCCTGATGTAAGAAAAATTTCTTTTACAGGGGAATCCGGGACAGGAAAAAGGATATCCGAGCTTGCAGCCAGCGGG
ATGAAAAGGGTTACTCTTGAGCTGGGCGGAAGCGACCCCATGATTGTATGTGATGATGCCAATCTCGAAAGTGCAGTTGC
AGGAGCCATCAGGGGGAGATTTTACAATTGCGGCCAGACCTGTACTGCTGTCAAAAGGCTGTATGTTTTTGAATCCGTTG
CCAGGGAGTTCATAAGAAAACTCGAAGAAGGAGTTAAGAGATTAAAAGTCGGAAACGGACTGGATAAGGATACGGATATG
GGGCCTCTCAATAACCACAGCCAGTTTGAATACATAAAAGAGCTGGTAGCAGGAATTGAGGAGAAGGGTGAAGGCAGAAT
AATTGCAGGGGGAAAAGCCCCTTCATTCAAAGGCATGGGTAAAGGATATTTCTTTGAGCCGACTCTCGTTTCAGATGTCC
CCGGAGATTCCAGGCTCCTTAAGGAGGAGGTGTTCGGACCTTTGCTGCCCATAGTTACAGTAAGGAATCTCGATGAGGCT
ATAGAAGAGGCAAACAGGAGCATTTATGGTCTTGGAGCATCCATCTGGACAAAAGACCTGGACAGGATAAGGATGGGATG
CGAGCAGTTGAATGCGGGAATTATATGGGTTAACCAGCACCTTAAGGTAGCCCCGGAAGTTCCTTTCGGAGGAGTTAAAG
AGAGCGGGTTTGGAAGAGAAAACGGGCCTGACATCCTTTCCGAATACCTCGAAACCAGGACCATAATGTTAAAAACCTGA

Upstream 100 bases:

>100_bases
TTCCTGTATTATTCTTTAAAATTATCTTTAAAATTATTTGAACAAATTTGCAACGAATTTACTGCGGTATTTGTTATCTT
AAAATAGGCCTTTGTAAATA

Downstream 100 bases:

>100_bases
ATTTAATAACACGGAAACCGGTAAACAGAATTTGTAAAATCGGGTTTTTAATGCTGATCTGTCTGGAAGGAAAAATAAAG
ATTTTAAATAAAGGTTTTCG

Product: succinate-semialdehyde dehydrogenase [NADP+]

Products: NA

Alternate protein names: BADH [H]

Number of amino acids: Translated: 479; Mature: 479

Protein sequence:

>479_residues
MVAMKMQINGKAAGSCGGECFDVRNPATCELLEQVPRGTEEDVALAVEAALSAFEGWASISPQQRGMVFYRAAGLVRQRK
EELAALLTQEQGKPLAEARNELEGFSHVLEYYCGLAGSLRGDFIPVTGNGYSFTVKKPLGVCAAIIPWNMPALIMGWKIA
PALISGNTFVLKPASSTPLTNLTLASILNEAGLPAGVLNVVTGSGEIAGESLVRSPDVRKISFTGESGTGKRISELAASG
MKRVTLELGGSDPMIVCDDANLESAVAGAIRGRFYNCGQTCTAVKRLYVFESVAREFIRKLEEGVKRLKVGNGLDKDTDM
GPLNNHSQFEYIKELVAGIEEKGEGRIIAGGKAPSFKGMGKGYFFEPTLVSDVPGDSRLLKEEVFGPLLPIVTVRNLDEA
IEEANRSIYGLGASIWTKDLDRIRMGCEQLNAGIIWVNQHLKVAPEVPFGGVKESGFGRENGPDILSEYLETRTIMLKT

Sequences:

>Translated_479_residues
MVAMKMQINGKAAGSCGGECFDVRNPATCELLEQVPRGTEEDVALAVEAALSAFEGWASISPQQRGMVFYRAAGLVRQRK
EELAALLTQEQGKPLAEARNELEGFSHVLEYYCGLAGSLRGDFIPVTGNGYSFTVKKPLGVCAAIIPWNMPALIMGWKIA
PALISGNTFVLKPASSTPLTNLTLASILNEAGLPAGVLNVVTGSGEIAGESLVRSPDVRKISFTGESGTGKRISELAASG
MKRVTLELGGSDPMIVCDDANLESAVAGAIRGRFYNCGQTCTAVKRLYVFESVAREFIRKLEEGVKRLKVGNGLDKDTDM
GPLNNHSQFEYIKELVAGIEEKGEGRIIAGGKAPSFKGMGKGYFFEPTLVSDVPGDSRLLKEEVFGPLLPIVTVRNLDEA
IEEANRSIYGLGASIWTKDLDRIRMGCEQLNAGIIWVNQHLKVAPEVPFGGVKESGFGRENGPDILSEYLETRTIMLKT
>Mature_479_residues
MVAMKMQINGKAAGSCGGECFDVRNPATCELLEQVPRGTEEDVALAVEAALSAFEGWASISPQQRGMVFYRAAGLVRQRK
EELAALLTQEQGKPLAEARNELEGFSHVLEYYCGLAGSLRGDFIPVTGNGYSFTVKKPLGVCAAIIPWNMPALIMGWKIA
PALISGNTFVLKPASSTPLTNLTLASILNEAGLPAGVLNVVTGSGEIAGESLVRSPDVRKISFTGESGTGKRISELAASG
MKRVTLELGGSDPMIVCDDANLESAVAGAIRGRFYNCGQTCTAVKRLYVFESVAREFIRKLEEGVKRLKVGNGLDKDTDM
GPLNNHSQFEYIKELVAGIEEKGEGRIIAGGKAPSFKGMGKGYFFEPTLVSDVPGDSRLLKEEVFGPLLPIVTVRNLDEA
IEEANRSIYGLGASIWTKDLDRIRMGCEQLNAGIIWVNQHLKVAPEVPFGGVKESGFGRENGPDILSEYLETRTIMLKT

Specific function: 4-aminobutyrate (GABA) degradation. [C]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI153266822, Length=479, Percent_Identity=42.3799582463466, Blast_Score=365, Evalue=1e-101,
Organism=Homo sapiens, GI21361176, Length=479, Percent_Identity=41.544885177453, Blast_Score=357, Evalue=2e-98,
Organism=Homo sapiens, GI25777730, Length=479, Percent_Identity=39.874739039666, Blast_Score=352, Evalue=6e-97,
Organism=Homo sapiens, GI25777724, Length=481, Percent_Identity=41.1642411642412, Blast_Score=350, Evalue=2e-96,
Organism=Homo sapiens, GI25777732, Length=476, Percent_Identity=38.8655462184874, Blast_Score=333, Evalue=2e-91,
Organism=Homo sapiens, GI238814322, Length=491, Percent_Identity=38.2892057026477, Blast_Score=328, Evalue=7e-90,
Organism=Homo sapiens, GI115387104, Length=455, Percent_Identity=37.5824175824176, Blast_Score=325, Evalue=4e-89,
Organism=Homo sapiens, GI25777728, Length=419, Percent_Identity=42.2434367541766, Blast_Score=323, Evalue=2e-88,
Organism=Homo sapiens, GI21614513, Length=484, Percent_Identity=37.603305785124, Blast_Score=317, Evalue=1e-86,
Organism=Homo sapiens, GI25777726, Length=481, Percent_Identity=38.045738045738, Blast_Score=301, Evalue=9e-82,
Organism=Homo sapiens, GI12007648, Length=463, Percent_Identity=34.7732181425486, Blast_Score=301, Evalue=1e-81,
Organism=Homo sapiens, GI4507229, Length=460, Percent_Identity=38.4782608695652, Blast_Score=276, Evalue=3e-74,
Organism=Homo sapiens, GI25777721, Length=473, Percent_Identity=37.4207188160677, Blast_Score=267, Evalue=1e-71,
Organism=Homo sapiens, GI25952152, Length=460, Percent_Identity=33.695652173913, Blast_Score=261, Evalue=1e-69,
Organism=Homo sapiens, GI11095441, Length=476, Percent_Identity=32.3529411764706, Blast_Score=241, Evalue=8e-64,
Organism=Homo sapiens, GI188035924, Length=490, Percent_Identity=29.1836734693878, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI310128103, Length=487, Percent_Identity=29.3634496919918, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI310128093, Length=482, Percent_Identity=29.253112033195, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI301500698, Length=283, Percent_Identity=34.6289752650177, Blast_Score=189, Evalue=5e-48,
Organism=Homo sapiens, GI310128091, Length=482, Percent_Identity=28.4232365145228, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI223972651, Length=420, Percent_Identity=30.4761904761905, Blast_Score=162, Evalue=6e-40,
Organism=Homo sapiens, GI238859541, Length=453, Percent_Identity=28.6975717439294, Blast_Score=149, Evalue=6e-36,
Organism=Homo sapiens, GI25777736, Length=453, Percent_Identity=28.6975717439294, Blast_Score=148, Evalue=9e-36,
Organism=Homo sapiens, GI25777734, Length=453, Percent_Identity=28.6975717439294, Blast_Score=148, Evalue=9e-36,
Organism=Homo sapiens, GI71773324, Length=368, Percent_Identity=29.3478260869565, Blast_Score=147, Evalue=3e-35,
Organism=Homo sapiens, GI4502043, Length=351, Percent_Identity=29.6296296296296, Blast_Score=145, Evalue=9e-35,
Organism=Homo sapiens, GI238814371, Length=351, Percent_Identity=29.6296296296296, Blast_Score=145, Evalue=9e-35,
Organism=Homo sapiens, GI310128089, Length=331, Percent_Identity=30.5135951661631, Blast_Score=142, Evalue=6e-34,
Organism=Homo sapiens, GI4557303, Length=351, Percent_Identity=29.0598290598291, Blast_Score=142, Evalue=6e-34,
Organism=Homo sapiens, GI206597441, Length=444, Percent_Identity=27.4774774774775, Blast_Score=142, Evalue=8e-34,
Organism=Homo sapiens, GI206597439, Length=444, Percent_Identity=27.4774774774775, Blast_Score=142, Evalue=8e-34,
Organism=Homo sapiens, GI22907049, Length=444, Percent_Identity=27.4774774774775, Blast_Score=142, Evalue=8e-34,
Organism=Homo sapiens, GI73466520, Length=351, Percent_Identity=29.0598290598291, Blast_Score=142, Evalue=1e-33,
Organism=Homo sapiens, GI73695881, Length=352, Percent_Identity=29.5454545454545, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI73695879, Length=352, Percent_Identity=29.5454545454545, Blast_Score=139, Evalue=5e-33,
Organism=Homo sapiens, GI310128095, Length=318, Percent_Identity=31.1320754716981, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI310128097, Length=265, Percent_Identity=32.4528301886792, Blast_Score=126, Evalue=4e-29,
Organism=Homo sapiens, GI223972653, Length=420, Percent_Identity=28.0952380952381, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI310128087, Length=293, Percent_Identity=27.9863481228669, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI310128099, Length=230, Percent_Identity=27.3913043478261, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI310128101, Length=230, Percent_Identity=27.3913043478261, Blast_Score=96, Evalue=8e-20,
Organism=Escherichia coli, GI1789015, Length=471, Percent_Identity=39.9150743099788, Blast_Score=348, Evalue=4e-97,
Organism=Escherichia coli, GI87081896, Length=482, Percent_Identity=37.9668049792531, Blast_Score=323, Evalue=2e-89,
Organism=Escherichia coli, GI1786504, Length=480, Percent_Identity=38.3333333333333, Blast_Score=319, Evalue=2e-88,
Organism=Escherichia coli, GI1787558, Length=478, Percent_Identity=36.8200836820084, Blast_Score=301, Evalue=4e-83,
Organism=Escherichia coli, GI1787715, Length=476, Percent_Identity=36.7647058823529, Blast_Score=296, Evalue=2e-81,
Organism=Escherichia coli, GI1787684, Length=480, Percent_Identity=35.8333333333333, Blast_Score=295, Evalue=5e-81,
Organism=Escherichia coli, GI87082295, Length=479, Percent_Identity=34.2379958246347, Blast_Score=267, Evalue=9e-73,
Organism=Escherichia coli, GI87081926, Length=453, Percent_Identity=30.9050772626932, Blast_Score=229, Evalue=2e-61,
Organism=Escherichia coli, GI1788042, Length=460, Percent_Identity=30.4347826086957, Blast_Score=175, Evalue=4e-45,
Organism=Escherichia coli, GI1787250, Length=471, Percent_Identity=30.9978768577495, Blast_Score=175, Evalue=5e-45,
Organism=Escherichia coli, GI1787653, Length=393, Percent_Identity=25.1908396946565, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1788797, Length=371, Percent_Identity=24.2587601078167, Blast_Score=62, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17562198, Length=481, Percent_Identity=38.8773388773389, Blast_Score=342, Evalue=3e-94,
Organism=Caenorhabditis elegans, GI25144435, Length=476, Percent_Identity=37.3949579831933, Blast_Score=323, Evalue=8e-89,
Organism=Caenorhabditis elegans, GI133930964, Length=485, Percent_Identity=37.5257731958763, Blast_Score=316, Evalue=2e-86,
Organism=Caenorhabditis elegans, GI25143876, Length=460, Percent_Identity=36.304347826087, Blast_Score=304, Evalue=6e-83,
Organism=Caenorhabditis elegans, GI25143874, Length=460, Percent_Identity=36.304347826087, Blast_Score=304, Evalue=8e-83,
Organism=Caenorhabditis elegans, GI17534119, Length=468, Percent_Identity=38.6752136752137, Blast_Score=300, Evalue=1e-81,
Organism=Caenorhabditis elegans, GI32564736, Length=421, Percent_Identity=37.5296912114014, Blast_Score=294, Evalue=8e-80,
Organism=Caenorhabditis elegans, GI71995606, Length=477, Percent_Identity=34.1719077568134, Blast_Score=276, Evalue=2e-74,
Organism=Caenorhabditis elegans, GI17551164, Length=465, Percent_Identity=33.3333333333333, Blast_Score=271, Evalue=5e-73,
Organism=Caenorhabditis elegans, GI71995613, Length=416, Percent_Identity=33.8942307692308, Blast_Score=236, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI71986308, Length=460, Percent_Identity=31.7391304347826, Blast_Score=229, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI115534176, Length=482, Percent_Identity=31.1203319502075, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI17564084, Length=333, Percent_Identity=32.1321321321321, Blast_Score=147, Evalue=1e-35,
Organism=Caenorhabditis elegans, GI17534447, Length=453, Percent_Identity=26.4900662251656, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI32566756, Length=330, Percent_Identity=29.3939393939394, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI25146394, Length=330, Percent_Identity=29.3939393939394, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI25146391, Length=330, Percent_Identity=29.3939393939394, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI32564151, Length=406, Percent_Identity=27.0935960591133, Blast_Score=134, Evalue=7e-32,
Organism=Caenorhabditis elegans, GI115532534, Length=337, Percent_Identity=27.893175074184, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71990744, Length=295, Percent_Identity=27.7966101694915, Blast_Score=98, Evalue=8e-21,
Organism=Saccharomyces cerevisiae, GI6320917, Length=471, Percent_Identity=40.9766454352442, Blast_Score=367, Evalue=1e-102,
Organism=Saccharomyces cerevisiae, GI6324950, Length=473, Percent_Identity=39.7463002114165, Blast_Score=357, Evalue=2e-99,
Organism=Saccharomyces cerevisiae, GI6325196, Length=476, Percent_Identity=37.1848739495798, Blast_Score=320, Evalue=2e-88,
Organism=Saccharomyces cerevisiae, GI6323822, Length=478, Percent_Identity=36.4016736401674, Blast_Score=319, Evalue=6e-88,
Organism=Saccharomyces cerevisiae, GI6323821, Length=478, Percent_Identity=35.7740585774059, Blast_Score=316, Evalue=4e-87,
Organism=Saccharomyces cerevisiae, GI6319478, Length=462, Percent_Identity=34.4155844155844, Blast_Score=288, Evalue=1e-78,
Organism=Saccharomyces cerevisiae, GI6321826, Length=490, Percent_Identity=29.5918367346939, Blast_Score=156, Evalue=8e-39,
Organism=Saccharomyces cerevisiae, GI6321828, Length=480, Percent_Identity=25.2083333333333, Blast_Score=149, Evalue=9e-37,
Organism=Saccharomyces cerevisiae, GI6323757, Length=421, Percent_Identity=27.5534441805226, Blast_Score=104, Evalue=3e-23,
Organism=Drosophila melanogaster, GI20129399, Length=477, Percent_Identity=41.0901467505241, Blast_Score=358, Evalue=3e-99,
Organism=Drosophila melanogaster, GI24650465, Length=480, Percent_Identity=41.25, Blast_Score=342, Evalue=3e-94,
Organism=Drosophila melanogaster, GI281362580, Length=482, Percent_Identity=37.1369294605809, Blast_Score=322, Evalue=4e-88,
Organism=Drosophila melanogaster, GI62472918, Length=482, Percent_Identity=37.1369294605809, Blast_Score=322, Evalue=4e-88,
Organism=Drosophila melanogaster, GI62472926, Length=482, Percent_Identity=37.1369294605809, Blast_Score=322, Evalue=4e-88,
Organism=Drosophila melanogaster, GI62472936, Length=482, Percent_Identity=37.1369294605809, Blast_Score=322, Evalue=4e-88,
Organism=Drosophila melanogaster, GI21356737, Length=482, Percent_Identity=37.1369294605809, Blast_Score=322, Evalue=4e-88,
Organism=Drosophila melanogaster, GI24585660, Length=486, Percent_Identity=34.9794238683128, Blast_Score=313, Evalue=1e-85,
Organism=Drosophila melanogaster, GI24638876, Length=476, Percent_Identity=32.3529411764706, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24638878, Length=476, Percent_Identity=32.3529411764706, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24666674, Length=465, Percent_Identity=29.6774193548387, Blast_Score=204, Evalue=9e-53,
Organism=Drosophila melanogaster, GI24668425, Length=451, Percent_Identity=27.2727272727273, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24668417, Length=451, Percent_Identity=27.2727272727273, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24668413, Length=451, Percent_Identity=27.2727272727273, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI28574525, Length=453, Percent_Identity=24.0618101545254, Blast_Score=118, Evalue=8e-27,
Organism=Drosophila melanogaster, GI281360299, Length=327, Percent_Identity=29.0519877675841, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI281360297, Length=327, Percent_Identity=29.0519877675841, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI281360295, Length=327, Percent_Identity=29.0519877675841, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24586250, Length=327, Percent_Identity=29.0519877675841, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI28571798, Length=462, Percent_Identity=25.5411255411255, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI28571796, Length=462, Percent_Identity=25.5411255411255, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI28571794, Length=462, Percent_Identity=25.5411255411255, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI28571802, Length=462, Percent_Identity=25.5411255411255, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI28571800, Length=462, Percent_Identity=25.5411255411255, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI28571806, Length=462, Percent_Identity=25.5411255411255, Blast_Score=116, Evalue=3e-26,
Organism=Drosophila melanogaster, GI281360301, Length=327, Percent_Identity=29.0519877675841, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI45552499, Length=328, Percent_Identity=28.0487804878049, Blast_Score=111, Evalue=9e-25,
Organism=Drosophila melanogaster, GI281360303, Length=328, Percent_Identity=28.0487804878049, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI281360293, Length=146, Percent_Identity=31.5068493150685, Blast_Score=66, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR011264 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.8 [H]

Molecular weight: Translated: 51514; Mature: 51514

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAMKMQINGKAAGSCGGECFDVRNPATCELLEQVPRGTEEDVALAVEAALSAFEGWASI
CEEEEEEECCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
SPQQRGMVFYRAAGLVRQRKEELAALLTQEQGKPLAEARNELEGFSHVLEYYCGLAGSLR
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
GDFIPVTGNGYSFTVKKPLGVCAAIIPWNMPALIMGWKIAPALISGNTFVLKPASSTPLT
CCEEEEECCCEEEEECCCHHHHHHHHCCCCCHHHCCCCCCCCEECCCEEEEECCCCCCCH
NLTLASILNEAGLPAGVLNVVTGSGEIAGESLVRSPDVRKISFTGESGTGKRISELAASG
HHHHHHHHHHCCCCCCHHHEEECCCCCCCHHHHCCCCCEEEEECCCCCCCHHHHHHHHCC
MKRVTLELGGSDPMIVCDDANLESAVAGAIRGRFYNCGQTCTAVKRLYVFESVAREFIRK
CEEEEEEECCCCCEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LEEGVKRLKVGNGLDKDTDMGPLNNHSQFEYIKELVAGIEEKGEGRIIAGGKAPSFKGMG
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC
KGYFFEPTLVSDVPGDSRLLKEEVFGPLLPIVTVRNLDEAIEEANRSIYGLGASIWTKDL
CCEEECCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHH
DRIRMGCEQLNAGIIWVNQHLKVAPEVPFGGVKESGFGRENGPDILSEYLETRTIMLKT
HHHHHHHHHHCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEC
>Mature Secondary Structure
MVAMKMQINGKAAGSCGGECFDVRNPATCELLEQVPRGTEEDVALAVEAALSAFEGWASI
CEEEEEEECCCCCCCCCCCEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC
SPQQRGMVFYRAAGLVRQRKEELAALLTQEQGKPLAEARNELEGFSHVLEYYCGLAGSLR
CCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
GDFIPVTGNGYSFTVKKPLGVCAAIIPWNMPALIMGWKIAPALISGNTFVLKPASSTPLT
CCEEEEECCCEEEEECCCHHHHHHHHCCCCCHHHCCCCCCCCEECCCEEEEECCCCCCCH
NLTLASILNEAGLPAGVLNVVTGSGEIAGESLVRSPDVRKISFTGESGTGKRISELAASG
HHHHHHHHHHCCCCCCHHHEEECCCCCCCHHHHCCCCCEEEEECCCCCCCHHHHHHHHCC
MKRVTLELGGSDPMIVCDDANLESAVAGAIRGRFYNCGQTCTAVKRLYVFESVAREFIRK
CEEEEEEECCCCCEEEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LEEGVKRLKVGNGLDKDTDMGPLNNHSQFEYIKELVAGIEEKGEGRIIAGGKAPSFKGMG
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCC
KGYFFEPTLVSDVPGDSRLLKEEVFGPLLPIVTVRNLDEAIEEANRSIYGLGASIWTKDL
CCEEECCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHH
DRIRMGCEQLNAGIIWVNQHLKVAPEVPFGGVKESGFGRENGPDILSEYLETRTIMLKT
HHHHHHHHHHCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA