Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226906

Identifier: 21226906

GI number: 21226906

Start: 957384

End: 957986

Strand: Direct

Name: 21226906

Synonym: MM_0804

Alternate gene names: NA

Gene position: 957384-957986 (Clockwise)

Preceding gene: 21226905

Following gene: 161485680

Centisome position: 23.37

GC content: 47.26

Gene sequence:

>603_bases
ATGAAAGTCTCGGTCCTCTTCAGTGGAGGTAAAGACAGTTCGCTCTCTGCCCTTTTACTGGAACCGTTTTTCGAGGTCGA
ACTCGTAACCTGTAACTTTGGATTGCTCCCAACAGGAGAAATTGCAGCAAAAACTGCAAAAGAGTTACATTTTCCTCACA
GGACTGTTTCTCTTGACAGAGAAATTCTGGAAAAGGCATACGAGCTGTTACTTAGAGACGGGTTCCCCAGAAGCGCAATT
AATTACATTCATGGAAGAGCTGTTGAAACCCTCGCTCTGGACCCGGCAGTTAAACTGATTGCCGACGGGACCAGGAGGGA
TGACAGGGTCCCGGTGCTTTCTATTTCACAGATAAGAAGCATCGAAGACAGGCTGGGAGTTCAATATTTCTGCCCCCTTA
AAGGCTACGGCAAAAAGGTTGTGGACTCTCTGGTCAGGTCTTACCTGAATATTGAACAGGGGCCGAGTGAGAGTACCCAG
AAAGCAGATTACGAAACAGAACTCAGGGAGTTGATCCGTCAGAGGCAGGGAGACGAGAGGATAAGGGAACTATTCCCTGT
TCATTTCCAGTCCCATGTACTTTCAAGGAAGAAATTTCCCTGA

Upstream 100 bases:

>100_bases
GAAGGCTCCAGTCTCAGATAGACGACGAGCAGCTGAAAACACTCCTGATGCGGATGCAGCCAAAGAAACGCAAAACGTCC
ATAACCCGGGTTTAAGCACG

Downstream 100 bases:

>100_bases
AGAAGCCTGTGTGTTTAAAAATCGGAAGCCTCCCTGAAGGGAAAAATTCTGGAATAAAGATTTATAGAATCGAGTTATAT
TCAACCCCTATACTGCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKVSVLFSGGKDSSLSALLLEPFFEVELVTCNFGLLPTGEIAAKTAKELHFPHRTVSLDREILEKAYELLLRDGFPRSAI
NYIHGRAVETLALDPAVKLIADGTRRDDRVPVLSISQIRSIEDRLGVQYFCPLKGYGKKVVDSLVRSYLNIEQGPSESTQ
KADYETELRELIRQRQGDERIRELFPVHFQSHVLSRKKFP

Sequences:

>Translated_200_residues
MKVSVLFSGGKDSSLSALLLEPFFEVELVTCNFGLLPTGEIAAKTAKELHFPHRTVSLDREILEKAYELLLRDGFPRSAI
NYIHGRAVETLALDPAVKLIADGTRRDDRVPVLSISQIRSIEDRLGVQYFCPLKGYGKKVVDSLVRSYLNIEQGPSESTQ
KADYETELRELIRQRQGDERIRELFPVHFQSHVLSRKKFP
>Mature_200_residues
MKVSVLFSGGKDSSLSALLLEPFFEVELVTCNFGLLPTGEIAAKTAKELHFPHRTVSLDREILEKAYELLLRDGFPRSAI
NYIHGRAVETLALDPAVKLIADGTRRDDRVPVLSISQIRSIEDRLGVQYFCPLKGYGKKVVDSLVRSYLNIEQGPSESTQ
KADYETELRELIRQRQGDERIRELFPVHFQSHVLSRKKFP

Specific function: Unknown

COG id: COG2117

COG function: function code J; Predicted subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001962
- InterPro:   IPR014729 [H]

Pfam domain/function: PF00733 Asn_synthase [H]

EC number: NA

Molecular weight: Translated: 22699; Mature: 22699

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSVLFSGGKDSSLSALLLEPFFEVELVTCNFGLLPTGEIAAKTAKELHFPHRTVSLDR
CEEEEEEECCCCCCHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHH
EILEKAYELLLRDGFPRSAINYIHGRAVETLALDPAVKLIADGTRRDDRVPVLSISQIRS
HHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHCHHHHHHHCCCCCCCCCCEEEHHHHHH
IEDRLGVQYFCPLKGYGKKVVDSLVRSYLNIEQGPSESTQKADYETELRELIRQRQGDER
HHHHCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCHHH
IRELFPVHFQSHVLSRKKFP
HHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKVSVLFSGGKDSSLSALLLEPFFEVELVTCNFGLLPTGEIAAKTAKELHFPHRTVSLDR
CEEEEEEECCCCCCHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHH
EILEKAYELLLRDGFPRSAINYIHGRAVETLALDPAVKLIADGTRRDDRVPVLSISQIRS
HHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHCHHHHHHHCCCCCCCCCCEEEHHHHHH
IEDRLGVQYFCPLKGYGKKVVDSLVRSYLNIEQGPSESTQKADYETELRELIRQRQGDER
HHHHCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHCCCHHH
IRELFPVHFQSHVLSRKKFP
HHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]