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The map label for this gene is ygcF [C]

Identifier: 21226857

GI number: 21226857

Start: 904538

End: 905305

Strand: Direct

Name: ygcF [C]

Synonym: MM_0755

Alternate gene names: 21226857

Gene position: 904538-905305 (Clockwise)

Preceding gene: 21226856

Following gene: 21226858

Centisome position: 22.08

GC content: 46.74

Gene sequence:

>768_bases
ATGTCATCTTCAAACCATGAACCCGCTAACTTAAGAGAAGTCTTCTGTTCCGTGCAGGGAGAAGGCCCGTATGTCGGCAT
GAGGCAGGCTTTTGTCCGGTTTTCAGGCTGCAACCTCAGCTGCAACTACTGTGATACTAATTTCAGAAATCCTGGAACCT
ACGATTACGAGAGGGTTGAAGGCAGTGGAGTTTTCGAAAAGGTCTCAAACCCCGTAAACATAGAAAAGCTGGAATCCATG
CTTCAGCCTTTCAAAGATCTCCATTCTGTATCCCTGACAGGAGGAGAGCCTCTTTTGCATGCGGATTTCATAGAGAAACT
GAACCTTTCCGTGCCTCTGTACCTTGAATCCAATATGACTCTGCCTGAGCAGGCAAGAAAACTGCGCGAAAATGTTGCGT
ACGTGGCAGGAGATTTCAAGCTCCCGGAAGCTCTCAAAGACATCTCCCCGGAAACCAGGGAAGCACATATGGAAAACACT
ATTGAGTGCTTCAGGCTCCTTAGAAAAAATAATTCAAGAGACTGTTTTTGCAAAATTGTAATAGGCAGGGATACAAACAC
AGATACGGTATCTCTGGCTGCAGAAGCAATAGGATCCTATGTATCCTGCATAGTTCTCCAACCCGAAACGCCTCTGGGAA
GTGCGGTAAGGACTCCGCGGTTCAATCAGGCATCGATAAGGGGTATTCTAAAACTGCAGAAAAACCTGCTAAAGCTAACC
GACACGCGAATCATTCCGCAGACTCACAGAATGTGGGGTTGCCTGTAA

Upstream 100 bases:

>100_bases
TATTGTACGGCTGATGCAGGGTATCGGGGAAGCTTATGTAAGTGAATTTGGGGATATAGAAAAGGACCTCAGGAAGTCCA
GACCTCTCGGAGTGGCGTAA

Downstream 100 bases:

>100_bases
TCGAAAAGGGGGACGAATAAAATGGCAAATATGAGATTGGGAGTTATTGATTATATTGACAGCGCACATTACCTTCCAGG
GCACGGGAAGTGCGGAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MSSSNHEPANLREVFCSVQGEGPYVGMRQAFVRFSGCNLSCNYCDTNFRNPGTYDYERVEGSGVFEKVSNPVNIEKLESM
LQPFKDLHSVSLTGGEPLLHADFIEKLNLSVPLYLESNMTLPEQARKLRENVAYVAGDFKLPEALKDISPETREAHMENT
IECFRLLRKNNSRDCFCKIVIGRDTNTDTVSLAAEAIGSYVSCIVLQPETPLGSAVRTPRFNQASIRGILKLQKNLLKLT
DTRIIPQTHRMWGCL

Sequences:

>Translated_255_residues
MSSSNHEPANLREVFCSVQGEGPYVGMRQAFVRFSGCNLSCNYCDTNFRNPGTYDYERVEGSGVFEKVSNPVNIEKLESM
LQPFKDLHSVSLTGGEPLLHADFIEKLNLSVPLYLESNMTLPEQARKLRENVAYVAGDFKLPEALKDISPETREAHMENT
IECFRLLRKNNSRDCFCKIVIGRDTNTDTVSLAAEAIGSYVSCIVLQPETPLGSAVRTPRFNQASIRGILKLQKNLLKLT
DTRIIPQTHRMWGCL
>Mature_254_residues
SSSNHEPANLREVFCSVQGEGPYVGMRQAFVRFSGCNLSCNYCDTNFRNPGTYDYERVEGSGVFEKVSNPVNIEKLESML
QPFKDLHSVSLTGGEPLLHADFIEKLNLSVPLYLESNMTLPEQARKLRENVAYVAGDFKLPEALKDISPETREAHMENTI
ECFRLLRKNNSRDCFCKIVIGRDTNTDTVSLAAEAIGSYVSCIVLQPETPLGSAVRTPRFNQASIRGILKLQKNLLKLTD
TRIIPQTHRMWGCL

Specific function: Unknown

COG id: COG0602

COG function: function code O; Organic radical activating enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 28653; Mature: 28522

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSNHEPANLREVFCSVQGEGPYVGMRQAFVRFSGCNLSCNYCDTNFRNPGTYDYERVE
CCCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHEECCCCEEECCCCCCCCCCCCCCHHHCC
GSGVFEKVSNPVNIEKLESMLQPFKDLHSVSLTGGEPLLHADFIEKLNLSVPLYLESNMT
CCCHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHCCCEEEEECCCCC
LPEQARKLRENVAYVAGDFKLPEALKDISPETREAHMENTIECFRLLRKNNSRDCFCKIV
CHHHHHHHHHHHHEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
IGRDTNTDTVSLAAEAIGSYVSCIVLQPETPLGSAVRTPRFNQASIRGILKLQKNLLKLT
ECCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DTRIIPQTHRMWGCL
CCCCCCCHHHHHCCC
>Mature Secondary Structure 
SSSNHEPANLREVFCSVQGEGPYVGMRQAFVRFSGCNLSCNYCDTNFRNPGTYDYERVE
CCCCCCCHHHHHHHHHCCCCCCEEHHHHHHHEECCCCEEECCCCCCCCCCCCCCHHHCC
GSGVFEKVSNPVNIEKLESMLQPFKDLHSVSLTGGEPLLHADFIEKLNLSVPLYLESNMT
CCCHHHHCCCCCCHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHCCCEEEEECCCCC
LPEQARKLRENVAYVAGDFKLPEALKDISPETREAHMENTIECFRLLRKNNSRDCFCKIV
CHHHHHHHHHHHHEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
IGRDTNTDTVSLAAEAIGSYVSCIVLQPETPLGSAVRTPRFNQASIRGILKLQKNLLKLT
ECCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
DTRIIPQTHRMWGCL
CCCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]