| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226438
Identifier: 21226438
GI number: 21226438
Start: 443363
End: 443773
Strand: Direct
Name: 21226438
Synonym: MM_0336
Alternate gene names: NA
Gene position: 443363-443773 (Clockwise)
Preceding gene: 21226437
Following gene: 21226441
Centisome position: 10.82
GC content: 37.47
Gene sequence:
>411_bases ATGAAAATAAGAGTTGTAAGTTCGAGAGATGAAATTCTCTCCTTAAACCCGAACGAAAAGGTGATTCATCTTGCGTTCAG GCCTTCGAATAAAGATATTTTTCTGCTTGTCGAAACATGTCCCAAACTCGAGATAGTCCAGCTTCCAAGCTCATATCAGC GAACTATGTCAAAATCAATGGAGATGTTTTTAGAGATGCAGAAAATACAGCTGATTGAAGGAGACGTCTGGGGTCACAGA AAAGACATCAATGAATACTACACGGTCCCTTCTTCAGTGATGAATAAGATAAGGAATATGAAAGTCGATGGAATCCCCAA TGATAAAATTGCAGAGAAAATGAGCAAAGAAAGCAAACTCAACCAGAAAATGATCCTTTATATCCTGAACAAAAAACCTC TTGAGTTATAA
Upstream 100 bases:
>100_bases AACGAATAAAACTTCTACAAAAACACAGAAAAATATTTAAATATTGCAGTCTAATAAACTTCATTCAGTACTTAATTTAA ACTAGGGTCTGGGGAATAGT
Downstream 100 bases:
>100_bases AAGAAATTTCCAGGATTTCTCAAATATAGAGATGCCCTGAGGCATCCCTGTTATATACTGTTCAGTTATATATTTTAGCC TGAAAACCCGGGCATCGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MKIRVVSSRDEILSLNPNEKVIHLAFRPSNKDIFLLVETCPKLEIVQLPSSYQRTMSKSMEMFLEMQKIQLIEGDVWGHR KDINEYYTVPSSVMNKIRNMKVDGIPNDKIAEKMSKESKLNQKMILYILNKKPLEL
Sequences:
>Translated_136_residues MKIRVVSSRDEILSLNPNEKVIHLAFRPSNKDIFLLVETCPKLEIVQLPSSYQRTMSKSMEMFLEMQKIQLIEGDVWGHR KDINEYYTVPSSVMNKIRNMKVDGIPNDKIAEKMSKESKLNQKMILYILNKKPLEL >Mature_136_residues MKIRVVSSRDEILSLNPNEKVIHLAFRPSNKDIFLLVETCPKLEIVQLPSSYQRTMSKSMEMFLEMQKIQLIEGDVWGHR KDINEYYTVPSSVMNKIRNMKVDGIPNDKIAEKMSKESKLNQKMILYILNKKPLEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15912; Mature: 15912
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 6.6 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 6.6 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRVVSSRDEILSLNPNEKVIHLAFRPSNKDIFLLVETCPKLEIVQLPSSYQRTMSKSM CEEEEECCCCCEEEECCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHH EMFLEMQKIQLIEGDVWGHRKDINEYYTVPSSVMNKIRNMKVDGIPNDKIAEKMSKESKL HHHHHHHHHHEECCCCCCCCCCCHHHEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC NQKMILYILNKKPLEL CCEEEEEEECCCCCCC >Mature Secondary Structure MKIRVVSSRDEILSLNPNEKVIHLAFRPSNKDIFLLVETCPKLEIVQLPSSYQRTMSKSM CEEEEECCCCCEEEECCCCEEEEEEECCCCCCEEEEEECCCCEEEEECCCHHHHHHHHHH EMFLEMQKIQLIEGDVWGHRKDINEYYTVPSSVMNKIRNMKVDGIPNDKIAEKMSKESKL HHHHHHHHHHEECCCCCCCCCCCHHHEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCC NQKMILYILNKKPLEL CCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA