| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226201
Identifier: 21226201
GI number: 21226201
Start: 127683
End: 128300
Strand: Reverse
Name: 21226201
Synonym: MM_0099
Alternate gene names: NA
Gene position: 128300-127683 (Counterclockwise)
Preceding gene: 21226202
Following gene: 21226199
Centisome position: 3.13
GC content: 49.51
Gene sequence:
>618_bases GTGGAAACCCTTTGCAGTTATGGCTGCGTGCTTTACAGGCTCAGCCAGCTGGATAAAGCCGAAGAAGTATATAGAAGAGC CCTTCTTCTTGACCCCGATCATGTCGAATCGCACTGCGGGTATGGAATTTTGCTCAACAGGCGCGGACAGAAAACCGAAG CAGGCCTCCATTATGCACGTGCTCTTGAAATCGACCCGGAGCACGTTGAATCAAATTTCCGCTATGCACGTCTGCTTGAG GAAAAAGGGGAGCCAATTGAGGCCGAAACTTATTACATAGTAGCTCTCAAAGCAGACCCCGAAAGCTCTAAACTCCACCT TTATTATGCCCGCCTGCTTGCACAACACGGACTCATCCATGGGGCAAGAGTGCACTTCAGGTATGCGCTTAAAATTAGCC CTGAAGACGTTGAAGCTCACTGCGAATATGCAAGGCTGCTTGCCAGGTTCGGGCACAGGCATGAAGCTGAAGTTCAGTAC AAAAAAGCCCTTGAACTCAACCCCGGGCATTTTGGGAGCCTTTCCGGTTATGGAGATCTGCTTAAAGAAAAGGGGCAGTA CACCGAAGCTGAAAAAATTTACAGGCAGGCAGAATGTTTCAGACAGGACGCCTGGTAA
Upstream 100 bases:
>100_bases AGAAGCCCTCTGCGGATATGGATCTATGCTTGCCGGGGCAGGGTAGCTGGACGGAGCACGGATTCAGTATGAAAAAGCTC TTGAGTTCAATCCTGACCAT
Downstream 100 bases:
>100_bases TAAATTAATAATCCCTGTCCGCTCAGGCTGGCAAAGCCAGGATTCAGTAAAGCCGTAGAGGCTCAATTCCTTTTTTTTCC ATAAGGCAGGCAGGGATATC
Product: O-linked N-acetylglucosamine transferase
Products: NA
Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; O-Linked N-Acetylglucosamine Transferase; O-GlcNAc Transferase; Tetratricopeptide Repeat-Containing Protein; TPR Repeat Protein; TPR Domain-Containing Protein; Sulfotransferase; SEC-C Motif Domain Protein; Tetratricopeptide Repeat Family; Methyltransferase Type; SPY Protein; Peptidase S1 And S6 Chymotrypsin/Hap; FkbM Family Methyltransferase; Glycosyl Transferase Family Protein; Peptidase; Porphyrin Biosynthesis Protein; Flp Pilus Assembly Protein TadD; Tetratricopeptide Repeat Domain-Containing Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein; TPR Repeat-Containing Zn-Dependent Protease
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues METLCSYGCVLYRLSQLDKAEEVYRRALLLDPDHVESHCGYGILLNRRGQKTEAGLHYARALEIDPEHVESNFRYARLLE EKGEPIEAETYYIVALKADPESSKLHLYYARLLAQHGLIHGARVHFRYALKISPEDVEAHCEYARLLARFGHRHEAEVQY KKALELNPGHFGSLSGYGDLLKEKGQYTEAEKIYRQAECFRQDAW
Sequences:
>Translated_205_residues METLCSYGCVLYRLSQLDKAEEVYRRALLLDPDHVESHCGYGILLNRRGQKTEAGLHYARALEIDPEHVESNFRYARLLE EKGEPIEAETYYIVALKADPESSKLHLYYARLLAQHGLIHGARVHFRYALKISPEDVEAHCEYARLLARFGHRHEAEVQY KKALELNPGHFGSLSGYGDLLKEKGQYTEAEKIYRQAECFRQDAW >Mature_205_residues METLCSYGCVLYRLSQLDKAEEVYRRALLLDPDHVESHCGYGILLNRRGQKTEAGLHYARALEIDPEHVESNFRYARLLE EKGEPIEAETYYIVALKADPESSKLHLYYARLLAQHGLIHGARVHFRYALKISPEDVEAHCEYARLLARFGHRHEAEVQY KKALELNPGHFGSLSGYGDLLKEKGQYTEAEKIYRQAECFRQDAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI32307148, Length=198, Percent_Identity=29.7979797979798, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI32307150, Length=198, Percent_Identity=29.7979797979798, Blast_Score=88, Evalue=4e-18, Organism=Homo sapiens, GI83415184, Length=184, Percent_Identity=33.695652173913, Blast_Score=78, Evalue=4e-15, Organism=Homo sapiens, GI301336134, Length=184, Percent_Identity=33.695652173913, Blast_Score=78, Evalue=5e-15, Organism=Homo sapiens, GI22749211, Length=156, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI115532690, Length=196, Percent_Identity=28.5714285714286, Blast_Score=97, Evalue=6e-21, Organism=Caenorhabditis elegans, GI115532692, Length=196, Percent_Identity=28.5714285714286, Blast_Score=96, Evalue=9e-21, Organism=Drosophila melanogaster, GI17647755, Length=198, Percent_Identity=28.7878787878788, Blast_Score=87, Evalue=7e-18, Organism=Drosophila melanogaster, GI24585827, Length=198, Percent_Identity=28.7878787878788, Blast_Score=87, Evalue=7e-18, Organism=Drosophila melanogaster, GI24585829, Length=198, Percent_Identity=28.7878787878788, Blast_Score=87, Evalue=7e-18, Organism=Drosophila melanogaster, GI19920486, Length=174, Percent_Identity=32.183908045977, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI161076610, Length=174, Percent_Identity=32.183908045977, Blast_Score=75, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23714; Mature: 23714
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METLCSYGCVLYRLSQLDKAEEVYRRALLLDPDHVESHCGYGILLNRRGQKTEAGLHYAR CCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHH ALEIDPEHVESNFRYARLLEEKGEPIEAETYYIVALKADPESSKLHLYYARLLAQHGLIH EECCCHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCC GARVHFRYALKISPEDVEAHCEYARLLARFGHRHEAEVQYKKALELNPGHFGSLSGYGDL CEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCCCCHHHH LKEKGQYTEAEKIYRQAECFRQDAW HHCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure METLCSYGCVLYRLSQLDKAEEVYRRALLLDPDHVESHCGYGILLNRRGQKTEAGLHYAR CCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCCCHHHHHHHHH ALEIDPEHVESNFRYARLLEEKGEPIEAETYYIVALKADPESSKLHLYYARLLAQHGLIH EECCCHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCC GARVHFRYALKISPEDVEAHCEYARLLARFGHRHEAEVQYKKALELNPGHFGSLSGYGDL CEEEEEEEEEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCCCCHHHH LKEKGQYTEAEKIYRQAECFRQDAW HHCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA