| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is 21226191
Identifier: 21226191
GI number: 21226191
Start: 115136
End: 115342
Strand: Reverse
Name: 21226191
Synonym: MM_0089
Alternate gene names: NA
Gene position: 115342-115136 (Counterclockwise)
Preceding gene: 21226192
Following gene: 21226190
Centisome position: 2.82
GC content: 38.16
Gene sequence:
>207_bases ATGCCTAAGGATACCGAAAAGACATTGGGAGTACCGGCAGCAATTCTGTTGCTTATTGGAGGAGTATTCACAGTTATTTT ATTCTATTTTATGTTCCAATTTGCTGAACAGGAAAACCTTATTATGGTCATCTTAACTGCATTATTAATAGGCGTGGTTT CAATGATTGTAGCTAAAGTTCTGGGCCGCATATCCAGGATCAGATGA
Upstream 100 bases:
>100_bases TAATTTGTTTAAAAGATGATTTGTTTAAATGATAATTTGTTTAAACGATAATTCGTTGTAACGATAATCTGCTGTAATTA TCTCAGGAGGAACCATATTT
Downstream 100 bases:
>100_bases CCGGGGTTAAGTGCACGCTTACTTTTATTAATTTCTTTTCCTCTCTTTTTTCTGCACCATTACCAGATCATAAATTTTAT TGTTTAATCAGGAATTACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 68; Mature: 67
Protein sequence:
>68_residues MPKDTEKTLGVPAAILLLIGGVFTVILFYFMFQFAEQENLIMVILTALLIGVVSMIVAKVLGRISRIR
Sequences:
>Translated_68_residues MPKDTEKTLGVPAAILLLIGGVFTVILFYFMFQFAEQENLIMVILTALLIGVVSMIVAKVLGRISRIR >Mature_67_residues PKDTEKTLGVPAAILLLIGGVFTVILFYFMFQFAEQENLIMVILTALLIGVVSMIVAKVLGRISRIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7524; Mature: 7393
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKDTEKTLGVPAAILLLIGGVFTVILFYFMFQFAEQENLIMVILTALLIGVVSMIVAKV CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LGRISRIR HHHHHHCC >Mature Secondary Structure PKDTEKTLGVPAAILLLIGGVFTVILFYFMFQFAEQENLIMVILTALLIGVVSMIVAKV CCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH LGRISRIR HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA