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The map label for this gene is yicL [C]

Identifier: 21226190

GI number: 21226190

Start: 113888

End: 114763

Strand: Reverse

Name: yicL [C]

Synonym: MM_0088

Alternate gene names: 21226190

Gene position: 114763-113888 (Counterclockwise)

Preceding gene: 21226191

Following gene: 21226189

Centisome position: 2.8

GC content: 45.21

Gene sequence:

>876_bases
ATGCAAAAACGGGCATATTTACTTATTGCTGTGAGTGGTTCCCTTTGGGGTACAATAGGAATTTTTGTCCGGGAGCTCTA
CGGTTTAGGGTTTTCTACTCTTCAGATCGTAACCATGAGGGTGTTCTCAGCGGCTGTTATCATGCTGCTATACCTTCTTT
TTACAAAACCGGAACTGCTGAAAATCAGATTCCGGGATTCTCTTTATTTTGTGGGGACAGGTATCCTCAGCATTGTTTTC
TTTAACCTCTGTTATTTTATCACCATCAGAGAGACGTCTATAGCAATTGCAGTCACCCTCCTGTATACAGCCCCTGCATT
TGTTGCAATACTTTCCAGGATTATTTTCAGGGAAAGCCTGGATGCAAAAAAACTTTTTTCTCTGGGCCTTACCCTCACAG
GGTGTGCTTTTGTAACCGGCTACCTTCCTGAACTCGGAAATTCTCCCTCTATCACTCTGCCCTGGCTCCTTACAGGGCTG
GGGGCAGGTTTCGGGTATGCCCTTTACAGTATTTTCGGAAAAGTTGCTCTTAAAAAGTACGATACTGTAACAATCACAGC
CTACACTTTCTTTTTTGCCAGCCTTGCCCTCCTGCCTCTGGTTAGCTTTGAAACTTCAGGAGAGGCTTTCTCTACGGGAA
GTTTCTGGACCTACCTTATAGGTCTTGGCTTCTTCCCCACTGTTCTTGCCTATTTGCTTTACACAAAAGGGCTTGAAGAA
GTCGAATCTAGCAGGGCGGCTATAGTAGCGACAGTAGAGCCTGTAGTGGCTACCTTTGCAGGTTTCTTCTTTTTCAGGGA
AATAGTGTCAGGCTGGCAACTGGCAGGGATACTCTTTGTACTTGCAGGTGTGGTGCTTATACAGGAGAGAAAATGA

Upstream 100 bases:

>100_bases
ACAAAGATTTCAAATGAAATTCCGTTAAACAAGGTTTCAAATGAAAAAGAGTCTCTAAAAAAGGTATCTTAAACCGAAGA
TCTGGAGAAGAGGTTAAGGA

Downstream 100 bases:

>100_bases
AAATTTCCTCAAATTTTCTCCCTAAACTCTAATTTTTAATCTTTTTTCACTGCATGCTTTCAGTTTTCTTTTTGCTTTCA
CAGAATCGCTTAGAATAATA

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MQKRAYLLIAVSGSLWGTIGIFVRELYGLGFSTLQIVTMRVFSAAVIMLLYLLFTKPELLKIRFRDSLYFVGTGILSIVF
FNLCYFITIRETSIAIAVTLLYTAPAFVAILSRIIFRESLDAKKLFSLGLTLTGCAFVTGYLPELGNSPSITLPWLLTGL
GAGFGYALYSIFGKVALKKYDTVTITAYTFFFASLALLPLVSFETSGEAFSTGSFWTYLIGLGFFPTVLAYLLYTKGLEE
VESSRAAIVATVEPVVATFAGFFFFREIVSGWQLAGILFVLAGVVLIQERK

Sequences:

>Translated_291_residues
MQKRAYLLIAVSGSLWGTIGIFVRELYGLGFSTLQIVTMRVFSAAVIMLLYLLFTKPELLKIRFRDSLYFVGTGILSIVF
FNLCYFITIRETSIAIAVTLLYTAPAFVAILSRIIFRESLDAKKLFSLGLTLTGCAFVTGYLPELGNSPSITLPWLLTGL
GAGFGYALYSIFGKVALKKYDTVTITAYTFFFASLALLPLVSFETSGEAFSTGSFWTYLIGLGFFPTVLAYLLYTKGLEE
VESSRAAIVATVEPVVATFAGFFFFREIVSGWQLAGILFVLAGVVLIQERK
>Mature_291_residues
MQKRAYLLIAVSGSLWGTIGIFVRELYGLGFSTLQIVTMRVFSAAVIMLLYLLFTKPELLKIRFRDSLYFVGTGILSIVF
FNLCYFITIRETSIAIAVTLLYTAPAFVAILSRIIFRESLDAKKLFSLGLTLTGCAFVTGYLPELGNSPSITLPWLLTGL
GAGFGYALYSIFGKVALKKYDTVTITAYTFFFASLALLPLVSFETSGEAFSTGSFWTYLIGLGFFPTVLAYLLYTKGLEE
VESSRAAIVATVEPVVATFAGFFFFREIVSGWQLAGILFVLAGVVLIQERK

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004779
- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 32062; Mature: 32062

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKRAYLLIAVSGSLWGTIGIFVRELYGLGFSTLQIVTMRVFSAAVIMLLYLLFTKPELL
CCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHE
KIRFRDSLYFVGTGILSIVFFNLCYFITIRETSIAIAVTLLYTAPAFVAILSRIIFRESL
EEEECCCCHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DAKKLFSLGLTLTGCAFVTGYLPELGNSPSITLPWLLTGLGAGFGYALYSIFGKVALKKY
CHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHC
DTVTITAYTFFFASLALLPLVSFETSGEAFSTGSFWTYLIGLGFFPTVLAYLLYTKGLEE
CEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
VESSRAAIVATVEPVVATFAGFFFFREIVSGWQLAGILFVLAGVVLIQERK
HHCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQKRAYLLIAVSGSLWGTIGIFVRELYGLGFSTLQIVTMRVFSAAVIMLLYLLFTKPELL
CCCCEEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHE
KIRFRDSLYFVGTGILSIVFFNLCYFITIRETSIAIAVTLLYTAPAFVAILSRIIFRESL
EEEECCCCHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DAKKLFSLGLTLTGCAFVTGYLPELGNSPSITLPWLLTGLGAGFGYALYSIFGKVALKKY
CHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHC
DTVTITAYTFFFASLALLPLVSFETSGEAFSTGSFWTYLIGLGFFPTVLAYLLYTKGLEE
CEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHH
VESSRAAIVATVEPVVATFAGFFFFREIVSGWQLAGILFVLAGVVLIQERK
HHCCCEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]