The gene/protein map for NC_007796 is currently unavailable.
Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

Click here to switch to the map view.

The map label for this gene is 21226166

Identifier: 21226166

GI number: 21226166

Start: 83342

End: 85348

Strand: Reverse

Name: 21226166

Synonym: MM_0064

Alternate gene names: NA

Gene position: 85348-83342 (Counterclockwise)

Preceding gene: 21226167

Following gene: 21226165

Centisome position: 2.08

GC content: 42.45

Gene sequence:

>2007_bases
ATGAACATAAACAGAGTATTTGCTCTATTTTTAGCCTTAGTGGTCTTTTCATCAGCTTTGGGTATAGGAGCTGCAGCTGA
AATTACTGTCCAGCCCGGACAATCGATACAGGACGTGTTGAATAGCTCAGTCTCGGGTGATGAGATTATCATAAGCCCTG
GAAACTATGCTGACAATCTCAGGATAACGACAGGTGATATTACTGTCAGGTCGGCTTCCGGGAATCCTGAAGATACGATA
GTGACAGCGGCCAGTCCGGCTGAAGATGTTTTTTATGTTGAAGCCAGCAACGTAACAATTACAGGGCTCGGCATAAATGG
TGCAGGATATGACCGTGCCGGCGTTTATCTGATAAGATCAAATAACTGTATTATTGAAAATAACGAATTTTTAAATAACG
CTCTCGGAATATACCTCAAGAACTCTACGTATAACCTTATTCTTAATAATACGGCAGTAGAAGGTAAGCGAGCGGTCAAT
GTTGAGAGGTCAAACTATAATACAATCTCAGGAAATAATGTTTCAGACCAGAGGTTCGGGATCTATTTCCTTATATCAGA
AGCGAACATAGCTTCGAATAATCAGGTAAGTGGGAGCGTCGACCATGGAATTGTCCTCGAAAGTTGCAGTGATACCAGCC
TTGTGAACAATACTGTAAGCTCAAATGAGGATAACGGCATTCACATAGTTGGTTCGACCAACAACAGCCTTACAGGAAAT
ACAGCGGATTCAAACCTTGTCTATGGGATCTATCTGAGGGATTCAAACGGCAACAACCTTACAGACAACAAAGCATTAAA
CAACAGCAGAGGTATTTTCCTGTTAAGGTCGGGCGAAAGTGAACTGTCGGGTAATGAAGTTTCAAACAACAGAAACGGCA
TTCTGCTAACGTCTGCAGGAAACAGCAGTATACTGTATAGCACGGTTTTACAGAACAATGTCTCCGGAATATCTTTACTT
AATTCCACTTACTGCAATATCAGTGAGAATGTGCTTTCCGGCAATACACTCGGAATAGACCTTGCTTTCTCAAGCAACAG
TACAATTGTCAATAACAACATTCAGGAAGGAGGAAGAGGCCTTAACCTTCAGGACTCGAATTACAATATACTCGTAAACA
ATACAGCTTTGAAAAACAGGTATGGAGCCTACCTGCTGCGCTCTGGCTGGAATGTGTTCTCCAATAATATAGCAAGCGAA
AGCGATGACCACGGTATCGTCCTGGAGAACTCAAGCAACAGTAACGAACTTAGCGGCAACACAGCAGACTCTAACCGCGC
TTATGGCATATACCTCACAGGTTCAAATAATAACGATATCAGTAACAATAAAGTATCCGAAAATTCAAGGGGTATTTACC
TTATGACGTCTAACGGGAACGCCCTTTTGAATAATACGGTGTTGAATAATGGAGAATATGCAATTCTGTTGGCGTATTCA
TCAGGTAACGATATCCTGGAAAACGAGGCTTCGAGCAGCAACAGGGGTATTCACCTGAGCACCTCCGATGACAACACGCT
TTCAGGCAATAATATTGTCTCAAACGGTGTTTCCGGCTTACATATGACTTCTACAAGCAACAATAATACCTTCTTTAACA
ACTATCTAAACAATAATGTTAATGCGGATGTTAAGCAGGGCAGTGTCGGAAATGTCTGGAATACAACAAAAACCAAAGGC
ACAAGCATAACAGGCGGACCATATCTGGGGGGCAATTTCTGGGGAAAACCTGATGGGACAGGCTTCTCTCAGACAACAGC
CGATTCCGATGTAGACGGTATTGCCGATGGGGAGTTTAATATTTCAAACAGCGGCTATGCGGACTATCTTCCTCTTGTAG
CTGTTTCCGATACAGAGCAGCCCGTAATTCCTGAAAATTTAACGGATGACGAGCCGGAAATGCCAGAAAATGAAACGGAA
ACGAATATTAACACAACAGAAACTAACACAACGGAAACAACTATCAGCGAGACAGAAACGGATACTTACGAAAACGAGAC
TGCATAA

Upstream 100 bases:

>100_bases
TATTATTCTGACATTATTTTCTAATAGATTTATATTATTTCATGTTTATTTCAACATGGGATATATAAATCTAAATAATA
AATAACATCTGACGTGGGGG

Downstream 100 bases:

>100_bases
AAAAATCCGCTCAAAAAATGAAAAATAATGAAAAATATACCGGGCATGAAGTTCAGTTTACAGCCTGAAACTGGACGATT
CAACCGAATTAAAGAAGACT

Product: surface layer protein B

Products: NA

Alternate protein names: Surface Layer Protein B; Cell Surface Glycoprotein; Nitrous Oxide Reductase Maturation Protein NosD; Cell Surfacr Protein; Parallel Beta-Helix Repeat-Containing Protein; Surface Layer Protein; Nitrous Oxidase Accessory Protein; Nitrous Oxidase Accessory Protein-Like; NosD Protein; PKD Domain Containing Protein

Number of amino acids: Translated: 668; Mature: 668

Protein sequence:

>668_residues
MNINRVFALFLALVVFSSALGIGAAAEITVQPGQSIQDVLNSSVSGDEIIISPGNYADNLRITTGDITVRSASGNPEDTI
VTAASPAEDVFYVEASNVTITGLGINGAGYDRAGVYLIRSNNCIIENNEFLNNALGIYLKNSTYNLILNNTAVEGKRAVN
VERSNYNTISGNNVSDQRFGIYFLISEANIASNNQVSGSVDHGIVLESCSDTSLVNNTVSSNEDNGIHIVGSTNNSLTGN
TADSNLVYGIYLRDSNGNNLTDNKALNNSRGIFLLRSGESELSGNEVSNNRNGILLTSAGNSSILYSTVLQNNVSGISLL
NSTYCNISENVLSGNTLGIDLAFSSNSTIVNNNIQEGGRGLNLQDSNYNILVNNTALKNRYGAYLLRSGWNVFSNNIASE
SDDHGIVLENSSNSNELSGNTADSNRAYGIYLTGSNNNDISNNKVSENSRGIYLMTSNGNALLNNTVLNNGEYAILLAYS
SGNDILENEASSSNRGIHLSTSDDNTLSGNNIVSNGVSGLHMTSTSNNNTFFNNYLNNNVNADVKQGSVGNVWNTTKTKG
TSITGGPYLGGNFWGKPDGTGFSQTTADSDVDGIADGEFNISNSGYADYLPLVAVSDTEQPVIPENLTDDEPEMPENETE
TNINTTETNTTETTISETETDTYENETA

Sequences:

>Translated_668_residues
MNINRVFALFLALVVFSSALGIGAAAEITVQPGQSIQDVLNSSVSGDEIIISPGNYADNLRITTGDITVRSASGNPEDTI
VTAASPAEDVFYVEASNVTITGLGINGAGYDRAGVYLIRSNNCIIENNEFLNNALGIYLKNSTYNLILNNTAVEGKRAVN
VERSNYNTISGNNVSDQRFGIYFLISEANIASNNQVSGSVDHGIVLESCSDTSLVNNTVSSNEDNGIHIVGSTNNSLTGN
TADSNLVYGIYLRDSNGNNLTDNKALNNSRGIFLLRSGESELSGNEVSNNRNGILLTSAGNSSILYSTVLQNNVSGISLL
NSTYCNISENVLSGNTLGIDLAFSSNSTIVNNNIQEGGRGLNLQDSNYNILVNNTALKNRYGAYLLRSGWNVFSNNIASE
SDDHGIVLENSSNSNELSGNTADSNRAYGIYLTGSNNNDISNNKVSENSRGIYLMTSNGNALLNNTVLNNGEYAILLAYS
SGNDILENEASSSNRGIHLSTSDDNTLSGNNIVSNGVSGLHMTSTSNNNTFFNNYLNNNVNADVKQGSVGNVWNTTKTKG
TSITGGPYLGGNFWGKPDGTGFSQTTADSDVDGIADGEFNISNSGYADYLPLVAVSDTEQPVIPENLTDDEPEMPENETE
TNINTTETNTTETTISETETDTYENETA
>Mature_668_residues
MNINRVFALFLALVVFSSALGIGAAAEITVQPGQSIQDVLNSSVSGDEIIISPGNYADNLRITTGDITVRSASGNPEDTI
VTAASPAEDVFYVEASNVTITGLGINGAGYDRAGVYLIRSNNCIIENNEFLNNALGIYLKNSTYNLILNNTAVEGKRAVN
VERSNYNTISGNNVSDQRFGIYFLISEANIASNNQVSGSVDHGIVLESCSDTSLVNNTVSSNEDNGIHIVGSTNNSLTGN
TADSNLVYGIYLRDSNGNNLTDNKALNNSRGIFLLRSGESELSGNEVSNNRNGILLTSAGNSSILYSTVLQNNVSGISLL
NSTYCNISENVLSGNTLGIDLAFSSNSTIVNNNIQEGGRGLNLQDSNYNILVNNTALKNRYGAYLLRSGWNVFSNNIASE
SDDHGIVLENSSNSNELSGNTADSNRAYGIYLTGSNNNDISNNKVSENSRGIYLMTSNGNALLNNTVLNNGEYAILLAYS
SGNDILENEASSSNRGIHLSTSDDNTLSGNNIVSNGVSGLHMTSTSNNNTFFNNYLNNNVNADVKQGSVGNVWNTTKTKG
TSITGGPYLGGNFWGKPDGTGFSQTTADSDVDGIADGEFNISNSGYADYLPLVAVSDTEQPVIPENLTDDEPEMPENETE
TNINTTETNTTETTISETETDTYENETA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 71022; Mature: 71022

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINRVFALFLALVVFSSALGIGAAAEITVQPGQSIQDVLNSSVSGDEIIISPGNYADNL
CCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCEEEECCCCCCCCE
RITTGDITVRSASGNPEDTIVTAASPAEDVFYVEASNVTITGLGINGAGYDRAGVYLIRS
EEEECCEEEEECCCCCCCEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCCCEEEEEC
NNCIIENNEFLNNALGIYLKNSTYNLILNNTAVEGKRAVNVERSNYNTISGNNVSDQRFG
CCEEEECCHHHCCEEEEEEECCEEEEEEECCCCCCCEEEEEECCCCCEECCCCCCCCEEE
IYFLISEANIASNNQVSGSVDHGIVLESCSDTSLVNNTVSSNEDNGIHIVGSTNNSLTGN
EEEEEEECCCCCCCCCCCCCCCCEEEECCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCC
TADSNLVYGIYLRDSNGNNLTDNKALNNSRGIFLLRSGESELSGNEVSNNRNGILLTSAG
CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCC
NSSILYSTVLQNNVSGISLLNSTYCNISENVLSGNTLGIDLAFSSNSTIVNNNIQEGGRG
CCCEEEEEHHHCCCCCEEEEECCCCCCCCCEECCCEEEEEEEECCCCEEEECCHHHCCCC
LNLQDSNYNILVNNTALKNRYGAYLLRSGWNVFSNNIASESDDHGIVLENSSNSNELSGN
CCEECCCCEEEEECCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCEEEECCCCCCCCCCC
TADSNRAYGIYLTGSNNNDISNNKVSENSRGIYLMTSNGNALLNNTVLNNGEYAILLAYS
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEECEEECCCCEEEEEEEC
SGNDILENEASSSNRGIHLSTSDDNTLSGNNIVSNGVSGLHMTSTSNNNTFFNNYLNNNV
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCEEEEECCCCCEEEEHHCCCCC
NADVKQGSVGNVWNTTKTKGTSITGGPYLGGNFWGKPDGTGFSQTTADSDVDGIADGEFN
CCEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
ISNSGYADYLPLVAVSDTEQPVIPENLTDDEPEMPENETETNINTTETNTTETTISETET
ECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
DTYENETA
CCCCCCCC
>Mature Secondary Structure
MNINRVFALFLALVVFSSALGIGAAAEITVQPGQSIQDVLNSSVSGDEIIISPGNYADNL
CCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHCCCCCCEEEECCCCCCCCE
RITTGDITVRSASGNPEDTIVTAASPAEDVFYVEASNVTITGLGINGAGYDRAGVYLIRS
EEEECCEEEEECCCCCCCEEEEECCCCCCEEEEEECCEEEEEEECCCCCCCCCCEEEEEC
NNCIIENNEFLNNALGIYLKNSTYNLILNNTAVEGKRAVNVERSNYNTISGNNVSDQRFG
CCEEEECCHHHCCEEEEEEECCEEEEEEECCCCCCCEEEEEECCCCCEECCCCCCCCEEE
IYFLISEANIASNNQVSGSVDHGIVLESCSDTSLVNNTVSSNEDNGIHIVGSTNNSLTGN
EEEEEEECCCCCCCCCCCCCCCCEEEECCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCC
TADSNLVYGIYLRDSNGNNLTDNKALNNSRGIFLLRSGESELSGNEVSNNRNGILLTSAG
CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCC
NSSILYSTVLQNNVSGISLLNSTYCNISENVLSGNTLGIDLAFSSNSTIVNNNIQEGGRG
CCCEEEEEHHHCCCCCEEEEECCCCCCCCCEECCCEEEEEEEECCCCEEEECCHHHCCCC
LNLQDSNYNILVNNTALKNRYGAYLLRSGWNVFSNNIASESDDHGIVLENSSNSNELSGN
CCEECCCCEEEEECCCCCCCCCEEEEECCCHHHHCCCCCCCCCCCEEEECCCCCCCCCCC
TADSNRAYGIYLTGSNNNDISNNKVSENSRGIYLMTSNGNALLNNTVLNNGEYAILLAYS
CCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCEEEECEEECCCCEEEEEEEC
SGNDILENEASSSNRGIHLSTSDDNTLSGNNIVSNGVSGLHMTSTSNNNTFFNNYLNNNV
CCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCEEEEECCCCCEEEEHHCCCCC
NADVKQGSVGNVWNTTKTKGTSITGGPYLGGNFWGKPDGTGFSQTTADSDVDGIADGEFN
CCEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
ISNSGYADYLPLVAVSDTEQPVIPENLTDDEPEMPENETETNINTTETNTTETTISETET
ECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCC
DTYENETA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA