Definition Methanosarcina mazei Go1 chromosome, complete genome.
Accession NC_003901
Length 4,096,345

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The map label for this gene is 21226128

Identifier: 21226128

GI number: 21226128

Start: 28927

End: 29472

Strand: Reverse

Name: 21226128

Synonym: MM_0026

Alternate gene names: NA

Gene position: 29472-28927 (Counterclockwise)

Preceding gene: 21226129

Following gene: 21226122

Centisome position: 0.72

GC content: 38.46

Gene sequence:

>546_bases
ATGAGCGATCGCGAACTTATAAAGCAAAAGAAAGAAGCTCTCATTGAGATGACAAACGGTTTTGCGGATCGTTATCTTGA
TGAAGACTATAAAATGCTGTGCAGGAAGCTCATCGACAAAATGAGCCGGAAAAGGAAGGTGCCATTTATTTCAGGAAAGC
TGGAGATTTGGGCGGCTGCAATAGTTTATTCTCTTGGGCAGATTAATTTCCTTTTTGATAAAAGTTTTGAGCCCTACGTG
AGCGCTACTGATCTTTGCAATTATTTCGGGACAAGCCAGAGCACAACTTCACAGAAAGCAAAGATAATCCGCGATATGTT
CAAAATGAGATATTTCGATGAGGAATTCTCAACAAAAAGAATGCTCAAGGAAAATCCCCTGAATGAGTTCGTAATGATCA
ATGGGCTTATTGTCCCTGTTTCTGCCGTTATTAGGTTATTTGAAGAAAAGGAAGCTCAATTGAAGAAGGAATTAAATTTG
GAAAATGAGGACTCTGTTGTGAAGAAAAAAGATAATAGAATAAATCGGGATCTAGGAGACTTTTGA

Upstream 100 bases:

>100_bases
TGTCGAATAAATACTGGTTTTGGGATGAGCTCAGAGATAAAATATGGATCTGAAAAACTATAAAGTATAAATCATATAAA
AGGTACTCAGGGGATGAACT

Downstream 100 bases:

>100_bases
ATATCTTCTAGAATCATAAAAATCTACTATCAATTCCACTAATCAGAATTCATAGAAAACAAACATATTTTTATATATTG
AGCTGATCCCAAAACCAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSDRELIKQKKEALIEMTNGFADRYLDEDYKMLCRKLIDKMSRKRKVPFISGKLEIWAAAIVYSLGQINFLFDKSFEPYV
SATDLCNYFGTSQSTTSQKAKIIRDMFKMRYFDEEFSTKRMLKENPLNEFVMINGLIVPVSAVIRLFEEKEAQLKKELNL
ENEDSVVKKKDNRINRDLGDF

Sequences:

>Translated_181_residues
MSDRELIKQKKEALIEMTNGFADRYLDEDYKMLCRKLIDKMSRKRKVPFISGKLEIWAAAIVYSLGQINFLFDKSFEPYV
SATDLCNYFGTSQSTTSQKAKIIRDMFKMRYFDEEFSTKRMLKENPLNEFVMINGLIVPVSAVIRLFEEKEAQLKKELNL
ENEDSVVKKKDNRINRDLGDF
>Mature_180_residues
SDRELIKQKKEALIEMTNGFADRYLDEDYKMLCRKLIDKMSRKRKVPFISGKLEIWAAAIVYSLGQINFLFDKSFEPYVS
ATDLCNYFGTSQSTTSQKAKIIRDMFKMRYFDEEFSTKRMLKENPLNEFVMINGLIVPVSAVIRLFEEKEAQLKKELNLE
NEDSVVKKKDNRINRDLGDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21268; Mature: 21137

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRELIKQKKEALIEMTNGFADRYLDEDYKMLCRKLIDKMSRKRKVPFISGKLEIWAAA
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHH
IVYSLGQINFLFDKSFEPYVSATDLCNYFGTSQSTTSQKAKIIRDMFKMRYFDEEFSTKR
HHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MLKENPLNEFVMINGLIVPVSAVIRLFEEKEAQLKKELNLENEDSVVKKKDNRINRDLGD
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
F
C
>Mature Secondary Structure 
SDRELIKQKKEALIEMTNGFADRYLDEDYKMLCRKLIDKMSRKRKVPFISGKLEIWAAA
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHH
IVYSLGQINFLFDKSFEPYVSATDLCNYFGTSQSTTSQKAKIIRDMFKMRYFDEEFSTKR
HHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MLKENPLNEFVMINGLIVPVSAVIRLFEEKEAQLKKELNLENEDSVVKKKDNRINRDLGD
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA