| Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
|---|---|
| Accession | NC_003901 |
| Length | 4,096,345 |
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The map label for this gene is apgM
Identifier: 161485676
GI number: 161485676
Start: 1700863
End: 1702056
Strand: Direct
Name: apgM
Synonym: MM_1418
Alternate gene names: 161485676
Gene position: 1700863-1702056 (Clockwise)
Preceding gene: 21227517
Following gene: 21227521
Centisome position: 41.52
GC content: 46.57
Gene sequence:
>1194_bases ATGAAATATGCCATACTTATAGGAGACGGAATGGCGGATTACCCTATAGAGAAACTGGGTAACAGGACTATTCTACAGGC AGCCCGAACACCTGCTATGGATTCCATTGCAGCGCGCGGGAGAGCCGGGCTTGCAAAGACCGTACCTGATAGTTTTCCTC CAGGAAGCGACGTTGCAAATATGTCAATTCTGGGATACGACCCGGCAACCTATTACTCAGGAAGGGCTCCTCTGGAAGCT GCGAGTATGGGAGTAGCTCTTGCAGCGGACGATGTGGCTTTCAGGTGCAATCTTATTACCACAGAGCACGGGATGATAAA AGACTACAGTGCAGGGCATATCAGCAGTGATGAAGCAGAGATTTTGATTGATACTCTTGATTACGAACTCAGTACAGAGA ATATCAGGTTTTATCCGGGAATAAGTTACAGGCACCTTATCGTTGCCGGAAATAACCTGGGGGCAGAAACGGAATGCACA CCTCCGCACGATATCACAGGAGAGAAAATAGATAAATATCTGCCCAGAGGAAAAGACGGGGAGTTTTTCTCAGAGCTTAT TGAAGCTTCCAAGGTTGTTCTGGAACTGCATCCCGTTAACCTTAAACGAGTGGAGGAAGGAAAAAACCCTGCAAACTCTA TCTGGGTCTGGGGGCAGGGCTACGCCCCGAAGTTCACGGCTTTTATGAAACTTTATGGGAAAAAAGGAGCTGTCATTTCC GCAGTGGATTTGCTTAAGGGAATCGGGATTTATGCCGGGCTGGATGTAATTGAAGTCCACGGAGCAACCGGTTACCTGGA TACCAATTATGAGGGGAAGGTCAGAGCAGCTATTGAAGCATTGAAAACCAGAGATCTTGTTTTCGTGCATGTCGAGGCTC CTGATGAGGCAGGGCACGAAGGCAGCATTGAGAAAAAGTTGAAGGCAGTTGAGGATTTTGACAGCCGCATAGTTGCCCCT ATCCTTGAATACGCAGAAAACTCAGATGAGCCTTTTACAATCCTTGTACTTCCTGACCATCCTACCCCTATATCAGTAAA GACCCATACACGAGACCCTATTCCGTTTGCTATCTACAGAACTGATAAACCAGAAACGGACAATGTGGAAGCCTTTGATG AGGAATCAGTTAAAAATGGCTCTATGGGACTCGTAAAAGCTTCAGACCTCATAGGAATTCTTATAAAGAGCTAA
Upstream 100 bases:
>100_bases CTGGCAGGTGCCAAAAAAATATTATTCAGGTATCTGGTAGAAAGTGATATATTTTATCCGCAAGAAGAAATGGCTAAAGC AGTTGGAAAAAGGTGAAGCA
Downstream 100 bases:
>100_bases ATTTTTTCAGGCTCTTTATAAGTTTTTCTGTTACCAGATTTTTATAATATTCTATGTTATCAGAATCTTTATGTTCTTTG CAAGGTTCTCTCTTACCAGG
Product: cofactor-independent phosphoglycerate mutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; aPGAM
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MKYAILIGDGMADYPIEKLGNRTILQAARTPAMDSIAARGRAGLAKTVPDSFPPGSDVANMSILGYDPATYYSGRAPLEA ASMGVALAADDVAFRCNLITTEHGMIKDYSAGHISSDEAEILIDTLDYELSTENIRFYPGISYRHLIVAGNNLGAETECT PPHDITGEKIDKYLPRGKDGEFFSELIEASKVVLELHPVNLKRVEEGKNPANSIWVWGQGYAPKFTAFMKLYGKKGAVIS AVDLLKGIGIYAGLDVIEVHGATGYLDTNYEGKVRAAIEALKTRDLVFVHVEAPDEAGHEGSIEKKLKAVEDFDSRIVAP ILEYAENSDEPFTILVLPDHPTPISVKTHTRDPIPFAIYRTDKPETDNVEAFDEESVKNGSMGLVKASDLIGILIKS
Sequences:
>Translated_397_residues MKYAILIGDGMADYPIEKLGNRTILQAARTPAMDSIAARGRAGLAKTVPDSFPPGSDVANMSILGYDPATYYSGRAPLEA ASMGVALAADDVAFRCNLITTEHGMIKDYSAGHISSDEAEILIDTLDYELSTENIRFYPGISYRHLIVAGNNLGAETECT PPHDITGEKIDKYLPRGKDGEFFSELIEASKVVLELHPVNLKRVEEGKNPANSIWVWGQGYAPKFTAFMKLYGKKGAVIS AVDLLKGIGIYAGLDVIEVHGATGYLDTNYEGKVRAAIEALKTRDLVFVHVEAPDEAGHEGSIEKKLKAVEDFDSRIVAP ILEYAENSDEPFTILVLPDHPTPISVKTHTRDPIPFAIYRTDKPETDNVEAFDEESVKNGSMGLVKASDLIGILIKS >Mature_397_residues MKYAILIGDGMADYPIEKLGNRTILQAARTPAMDSIAARGRAGLAKTVPDSFPPGSDVANMSILGYDPATYYSGRAPLEA ASMGVALAADDVAFRCNLITTEHGMIKDYSAGHISSDEAEILIDTLDYELSTENIRFYPGISYRHLIVAGNNLGAETECT PPHDITGEKIDKYLPRGKDGEFFSELIEASKVVLELHPVNLKRVEEGKNPANSIWVWGQGYAPKFTAFMKLYGKKGAVIS AVDLLKGIGIYAGLDVIEVHGATGYLDTNYEGKVRAAIEALKTRDLVFVHVEAPDEAGHEGSIEKKLKAVEDFDSRIVAP ILEYAENSDEPFTILVLPDHPTPISVKTHTRDPIPFAIYRTDKPETDNVEAFDEESVKNGSMGLVKASDLIGILIKS
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
COG id: COG3635
COG function: function code G; Predicted phosphoglycerate mutase, AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): APGM_METMA (Q8PX04)
Other databases:
- EMBL: AE008384 - RefSeq: NP_633442.2 - ProteinModelPortal: Q8PX04 - GeneID: 1479760 - GenomeReviews: AE008384_GR - KEGG: mma:MM_1418 - NMPDR: fig|192952.1.peg.1418 - HOGENOM: HBG463247 - OMA: DYSAGHI - ProtClustDB: PRK04200 - BioCyc: MMAZ192952:MM1418-MONOMER - BRENDA: 5.4.2.1 - GO: GO:0006096 - HAMAP: MF_01402_A - InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR004456 - InterPro: IPR013371 - InterPro: IPR006124 - Gene3D: G3DSA:3.40.720.10 - PIRSF: PIRSF006392 - TIGRFAMs: TIGR00306 - TIGRFAMs: TIGR02535
Pfam domain/function: PF01676 Metalloenzyme; PF10143 PhosphMutase; SSF53649 Alkaline_phosphatase_core
EC number: =5.4.2.1
Molecular weight: Translated: 43175; Mature: 43175
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYAILIGDGMADYPIEKLGNRTILQAARTPAMDSIAARGRAGLAKTVPDSFPPGSDVAN CEEEEEEECCCCCCCHHHHCCEEEEHHHCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCC MSILGYDPATYYSGRAPLEAASMGVALAADDVAFRCNLITTEHGMIKDYSAGHISSDEAE EEEEECCCHHCCCCCCCCHHHHCCEEEEECCEEEEEEEEECCCCCEECCCCCCCCCCCCE ILIDTLDYELSTENIRFYPGISYRHLIVAGNNLGAETECTPPHDITGEKIDKYLPRGKDG EEEEEECCEECCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCH EFFSELIEASKVVLELHPVNLKRVEEGKNPANSIWVWGQGYAPKFTAFMKLYGKKGAVIS HHHHHHHHHCEEEEEEECCCHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEH AVDLLKGIGIYAGLDVIEVHGATGYLDTNYEGKVRAAIEALKTRDLVFVHVEAPDEAGHE HHHHHHHCCHHCCCEEEEECCCCCEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCC GSIEKKLKAVEDFDSRIVAPILEYAENSDEPFTILVLPDHPTPISVKTHTRDPIPFAIYR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCCCCCCEEEEE TDKPETDNVEAFDEESVKNGSMGLVKASDLIGILIKS CCCCCCCCCCCCCHHHCCCCCEEEEECCCEEEEEEEC >Mature Secondary Structure MKYAILIGDGMADYPIEKLGNRTILQAARTPAMDSIAARGRAGLAKTVPDSFPPGSDVAN CEEEEEEECCCCCCCHHHHCCEEEEHHHCCCCHHHHHHCCCCCCHHCCCCCCCCCCCCCC MSILGYDPATYYSGRAPLEAASMGVALAADDVAFRCNLITTEHGMIKDYSAGHISSDEAE EEEEECCCHHCCCCCCCCHHHHCCEEEEECCEEEEEEEEECCCCCEECCCCCCCCCCCCE ILIDTLDYELSTENIRFYPGISYRHLIVAGNNLGAETECTPPHDITGEKIDKYLPRGKDG EEEEEECCEECCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCH EFFSELIEASKVVLELHPVNLKRVEEGKNPANSIWVWGQGYAPKFTAFMKLYGKKGAVIS HHHHHHHHHCEEEEEEECCCHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCEEH AVDLLKGIGIYAGLDVIEVHGATGYLDTNYEGKVRAAIEALKTRDLVFVHVEAPDEAGHE HHHHHHHCCHHCCCEEEEECCCCCEEECCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCC GSIEKKLKAVEDFDSRIVAPILEYAENSDEPFTILVLPDHPTPISVKTHTRDPIPFAIYR CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEECCCCCCCEEEEE TDKPETDNVEAFDEESVKNGSMGLVKASDLIGILIKS CCCCCCCCCCCCCHHHCCCCCEEEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12125824