Click here to switch to the map view.

The map label for this gene is rpoB

Identifier: 21223036

GI number:

Start: 5078061

End: 5081546

Strand: Direct

Name: rpoB

Synonym: SCO4654

Alternate gene names: NA

Gene position: NA

Preceding gene: 21223035

Following gene: 32141243

Centisome position: NA

GC content: NA

Gene sequence:

>3486_bases
TTGGCCGCCTCGCGCAATGCCTCGACCGCGAATACGAACAACGCTGCCAGCACCGCCCCGCTGCGCATCTCCTTTGCAAA
GATCAAGGAGCCCCTCGAGGTTCCGAACCTCCTGGCGCTGCAAACCGAGAGCTTCGACTGGCTCCTCGGCAACGACGCCT
GGAAGGCTCGCGTCGAGTCGGCTCTGGAGTCCGGTCAGGACGTCCCCACCAAGTCCGGTCTGGAAGAGATCTTCGAGGAG
ATCTCGCCGATCGAGGACTTCTCCGGGTCGATGTCGCTGACGTTCCGCGACCACCGCTTCGAGCCTCCCAAGAACAGCAT
CGACGAGTGCAAGGACCGCGACTTCACGTACGCGGCCCCGCTCTTCGTCACCGCCGAGTTCACCAACAACGAGACCGGCG
AGATCAAGTCCCAGACGGTCTTCATGGGCGACTTCCCGCTCATGACCAACAAGGGCACCTTCGTCATCAACGGCACCGAG
CGTGTCGTCGTGTCGCAGCTGGTCCGCTCGCCGGGTGTCTACTTCGACTCCTCCATCGACAAGACGTCCGACAAGGACAT
CTTCTCCGCCAAGATCATCCCGTCCCGGGGTGCCTGGCTGGAGATGGAGATCGACAAGCGCGACATGGTCGGTGTGCGCA
TCGACCGCAAGCGCAAGCAGTCCGTGACCGTCCTCCTCAAGGCCCTCGGCTGGACCACCGAGCAGATCCTCGAGGAGTTC
GGCGAGTACGAGTCCATGCGCGCCACCCTGGAGAAGGACCACACCCAGGGCCAGGACGACGCGCTGCTCGACATCTACCG
CAAGCTGCGTCCGGGCGAGCCCCCCACGCGTGAGGCCGCGCAGACGCTGCTCGAGAACCTCTACTTCAACCCGAAGCGCT
ACGACCTCGCCAAGGTCGGCCGCTACAAGGTGAACAAGAAGCTCGGCGCGGACGAGCCGCTGGACGCCGGCGTGCTCACC
ACCGACGACGTCATCGCCACCATCAAGTACCTGGTGAAGCTGCACGCCGGTGAGACCGAGACGGTCGGCGAGTCGGGCCG
GGAGATCGTCGTCGAGACCGACGACATCGACCACTTCGGCAACCGCCGCATCCGCAACGTCGGCGAGCTGATCCAGAACC
AGGTCCGTACGGGTCTCGCCCGTATGGAGCGCGTCGTGCGCGAGCGCATGACCACCCAGGACGTCGAGGCGATCACGCCG
CAGACCCTGATCAACATCCGGCCGGTCGTCGCCTCCATCAAGGAGTTCTTCGGCACCAGCCAGCTGTCCCAGTTCATGGA
CCAGAACAACCCGCTGTCGGGGCTGACGCACAAGCGTCGTCTGAACGCCCTCGGCCCGGGTGGTCTCTCCCGTGAGCGGG
CCGGCTTCGAGGTCCGCGACGTGCACCCGTCGCACTACGGCCGCATGTGCCCGATCGAGACGCCCGAAGGCCCGAACATC
GGTCTGATCGGCTCGCTCGCCTCGTACGGCCGCATCAACCCCTTCGGCTTCATCGAGACGCCGTACCGCAAGGTCGTCGA
GGGCCAGGTCACCGACGACGTCGACTACCTGACCGCCGACGAGGAGGACCGCTTCGTCATCGCGCAGGCCAACGCCGCGC
TGGGCGACGACATGCGGTTCGCCGAGGCCCGCGTCCTGGTCCGCCGTCGTGGCGGCGAGGTCGACTACGTCCCCGGTGAC
GACGTCGACTACATGGACGTCTCGCCGCGCCAGATGGTGTCGGTCGCGACCGCGATGATCCCGTTCCTCGAGCACGACGA
CGCCAACCGTGCCCTCATGGGCGCGAACATGATGCGTCAGGCGGTGCCGCTCATCAAGAGCGAGTCCCCGCTGGTCGGCA
CCGGCATGGAGTACCGCTCCGCCGCCGACGCCGGTGACGTGGTCAAGGCCGAGAAGGCGGGTGTGGTCCAGGAGGTCTCC
GCGGACTACATCACCACGACCAACGACGACGGCACGTACATCACGTACCGCCTGGCCAAGTTCTCCCGGTCCAACCAGGG
CACCTCGGTCAACCAGAAGGTCATCGTCGCCGAGGGCGACCGGATCATCGAGGGCCAGGTCCTGGCCGACGGTCCGGCCA
CCGAGAACGGCGAGATGGCGCTCGGCAAGAACCTGCTGGTCGCGTTCATGCCGTGGGAGGGTCACAACTACGAGGACGCG
ATCATCCTGTCGCAGCGCCTCGTGCAGGACGACGTCCTCTCCTCGATCCACATCGAGGAGCACGAGGTCGACGCCCGTGA
CACCAAGCTCGGCCCCGAGGAGATCACCCGGGACATCCCGAACGTCTCCGAGGAGGTCCTCGCCGACCTCGACGAGCGCG
GCATCATCCGCATCGGTGCCGAGGTCGTCGCCGGCGACATCCTCGTCGGCAAGGTCACGCCCAAGGGCGAGACCGAGCTG
ACGCCGGAGGAGCGCCTGCTCCGCGCGATCTTCGGTGAGAAGGCCCGTGAGGTCCGCGACACCTCGCTGAAGGTCCCGCA
CGGCGAGATCGGCAAGGTCATCGGCGTCCGCGTCTTCGACCGCGAGGAGGGCGACGAGCTTCCCCCCGGTGTGAACCAGC
TGGTGCGCGTGTACGTGGCGCAGAAGCGCAAGATCACCGACGGTGACAAGCTCGCCGGCCGCCACGGCAACAAGGGCGTC
ATCTCCAAGATCAACCCGATCGAGGACATGCCGTTCCTGGAGGACGGCACGCCTGTCGACATCATCCTGAACCCGCTGGC
TGTCCCGTCCCGAATGAACCCGGGACAGGTCCTGGAGATCCACCTCGGCTGGCTCGCCAGCCGAGGCTGGGACGTCTCCG
GCCTCGCGGAGGAGTGGGCGCAGCGCCTCCAGGTGATCGGCGCCGACAAGGTCGAGCCCGGCACCAACGTCGCCACCCCG
GTCTTCGACGGTGCGCGCGAGGACGAGCTGGCCGGCCTGCTCCAGCACACCATCCCGAACCGCGACGGCGAGCGCATGGT
GCTTCCGTCCGGCAAGGCGCGGCTGTTCGACGGCCGCAGCGGTGAGCCGTTCCCGGAGCCGATCTCGGTCGGCTACATGT
ACATCCTCAAGCTCCACCACCTGGTCGACGACAAGCTGCACGCCCGGTCGACCGGCCCGTACTCGATGATCACCCAGCAG
CCGCTGGGTGGTAAGGCCCAGTTCGGTGGCCAGCGCTTCGGTGAGATGGAGGTGTGGGCGCTGGAGGCTTACGGCGCCGC
GTACGCCCTCCAGGAGCTGCTGACCATCAAGTCCGACGACGTGACCGGCCGCGTGAAGGTCTACGAGGCCATCGTCAAGG
GCGAGAACATCCCTGAGCCCGGCATCCCCGAGTCCTTCAAGGTGCTCATCAAGGAGATGCAGTCCCTGTGCCTCAACGTG
GAGGTGCTGTCCTCGGACGGCATGTCCATCGAGATGCGTGACACCGACGAGGACGTCTTCCGCGCAGCGGAGGAGCTCGG
CATCGACCTGTCGCGGCGCGAGCCGAGCAGCGTCGAAGAGGTCTGA

Upstream 100 bases:

>100_bases
TGACCTGGCTCTTTAGCCACATCAGGCACCCCCTGTCTCCGTGCACGGAAGAGGGGCCGGTACGCGCGTAGTGAGTCCGA
GCCCTCGGAAGGACCCCCTC

Downstream 100 bases:

>100_bases
CGGGAGTCAGGCGGGGCCTGTCCTCCACAGGCCCCGCCGATCCCGCGACCCCCGTTTCAGACCACAGACTTACAACCCTG
AGAGGGATTGACGCATAGTG

Product: DNA-directed RNA polymerase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1161_residues
MAASRNASTANTNNAASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNDAWKARVESALESGQDVPTKSGLEEIFEE
ISPIEDFSGSMSLTFRDHRFEPPKNSIDECKDRDFTYAAPLFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTE
RVVVSQLVRSPGVYFDSSIDKTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVGRYKVNKKLGADEPLDAGVLT
TDDVIATIKYLVKLHAGETETVGESGREIVVETDDIDHFGNRRIRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITP
QTLINIRPVVASIKEFFGTSQLSQFMDQNNPLSGLTHKRRLNALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRINPFGFIETPYRKVVEGQVTDDVDYLTADEEDRFVIAQANAALGDDMRFAEARVLVRRRGGEVDYVPGD
DVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQAVPLIKSESPLVGTGMEYRSAADAGDVVKAEKAGVVQEVS
ADYITTTNDDGTYITYRLAKFSRSNQGTSVNQKVIVAEGDRIIEGQVLADGPATENGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGAEVVAGDILVGKVTPKGETEL
TPEERLLRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFDREEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGV
ISKINPIEDMPFLEDGTPVDIILNPLAVPSRMNPGQVLEIHLGWLASRGWDVSGLAEEWAQRLQVIGADKVEPGTNVATP
VFDGAREDELAGLLQHTIPNRDGERMVLPSGKARLFDGRSGEPFPEPISVGYMYILKLHHLVDDKLHARSTGPYSMITQQ
PLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDVTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNV
EVLSSDGMSIEMRDTDEDVFRAAEELGIDLSRREPSSVEEV

Sequences:
NA

Specific function: NA

COG id: COG0085

COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA