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The map label for this gene is Spo0J5 [H]

Identifier: 20809121

GI number: 20809121

Start: 2681525

End: 2682331

Strand: Reverse

Name: Spo0J5 [H]

Synonym: TTE2792

Alternate gene names: 20809121

Gene position: 2682331-2681525 (Counterclockwise)

Preceding gene: 20809122

Following gene: 20809120

Centisome position: 99.74

GC content: 37.55

Gene sequence:

>807_bases
ATGGTGTCCAATAAGGCTTTAGAGATTGTCTATTTGCCTATTGAAGCTATAAGGCCTAACCCGTACCAGCCTCGCAAAAC
TTTTGACATAGAAAATTTAGAAGAATTGGCTGAATCCATTAAAATTTACGGGGTGCTGCAGCCTATTACAGTGAGAATGG
TGGGCAACAATTCCTATGAATTGGTAGCTGGGGAGAGAAGGTGGCGTGCATCTAAATTAGCAGGGCTTAAAGAAGTTCCT
GCAATAGTCATCAATGCTCACGACCAAGATTCTGCAATTTTGTCTTTGATTGAAAATTTGCAAAGAGAAAATCTCAATTT
TATTGAAGAAGCTCAGGCCTACTACAATTTAATAAATGACCATCATCTCACGCAGGAACAACTTGCAAAAGTGCTGGGGA
AAAGCCAATCCACAATTGCCAATAAACTTCGCATCTTAAAACTCAGCAAAGAAATACAGGAAAAACTTTTAGAGAACGAT
TTGACAGAAAGGCATGCCAGGGCACTTTTGAGGCTTCCTGATGAGGAACTTCAGAAAAAGGTATTGGAAGTTATAGTAAA
AAAGAAGCTCAATGTGAGTCAAACAGAAAAATTAGTCCAGGAAATGATTGATAAGATAACAAAAAGGCCAGAGGTTTCTC
AAAAGAATGGCAAGAAAATGATGAAGTTTTACAAAGACATTAGAATTTTTGTCAACACTATTAAACAGACTGTGGAGGCC
ATGAAAAGGTCTGGTGTGAATGCCGAGTACACACAAAGAGAAGAGGATGAGTATTTGGAATTTGTAATAAGAATTCCTAA
AAAATAA

Upstream 100 bases:

>100_bases
TTCCAATACCTGAAACTTTTTTATAATTTTAGAAGGATTTTCCTTATTTTTGTCGAATATATAATTTAAAGGGGAAGAGT
GATGGAGTGGGGTGTTAGAA

Downstream 100 bases:

>100_bases
ATTAAATTTCACCCCCTGTCAGATGTTCCATGTGGAACATTATTATAAACAATGATATAATAGACGTGAGAAGGTGGTCC
TGATAAACAGGGGGTGGAAA

Product: transcriptional regulator

Products: NA

Alternate protein names: Noc [H]

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MVSNKALEIVYLPIEAIRPNPYQPRKTFDIENLEELAESIKIYGVLQPITVRMVGNNSYELVAGERRWRASKLAGLKEVP
AIVINAHDQDSAILSLIENLQRENLNFIEEAQAYYNLINDHHLTQEQLAKVLGKSQSTIANKLRILKLSKEIQEKLLEND
LTERHARALLRLPDEELQKKVLEVIVKKKLNVSQTEKLVQEMIDKITKRPEVSQKNGKKMMKFYKDIRIFVNTIKQTVEA
MKRSGVNAEYTQREEDEYLEFVIRIPKK

Sequences:

>Translated_268_residues
MVSNKALEIVYLPIEAIRPNPYQPRKTFDIENLEELAESIKIYGVLQPITVRMVGNNSYELVAGERRWRASKLAGLKEVP
AIVINAHDQDSAILSLIENLQRENLNFIEEAQAYYNLINDHHLTQEQLAKVLGKSQSTIANKLRILKLSKEIQEKLLEND
LTERHARALLRLPDEELQKKVLEVIVKKKLNVSQTEKLVQEMIDKITKRPEVSQKNGKKMMKFYKDIRIFVNTIKQTVEA
MKRSGVNAEYTQREEDEYLEFVIRIPKK
>Mature_268_residues
MVSNKALEIVYLPIEAIRPNPYQPRKTFDIENLEELAESIKIYGVLQPITVRMVGNNSYELVAGERRWRASKLAGLKEVP
AIVINAHDQDSAILSLIENLQRENLNFIEEAQAYYNLINDHHLTQEQLAKVLGKSQSTIANKLRILKLSKEIQEKLLEND
LTERHARALLRLPDEELQKKVLEVIVKKKLNVSQTEKLVQEMIDKITKRPEVSQKNGKKMMKFYKDIRIFVNTIKQTVEA
MKRSGVNAEYTQREEDEYLEFVIRIPKK

Specific function: Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division an

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 31136; Mature: 31136

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSNKALEIVYLPIEAIRPNPYQPRKTFDIENLEELAESIKIYGVLQPITVRMVGNNSYE
CCCCCEEEEEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCEEEEEECCCCEE
LVAGERRWRASKLAGLKEVPAIVINAHDQDSAILSLIENLQRENLNFIEEAQAYYNLIND
EEECHHHHHHHHHCCHHHCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
HHLTQEQLAKVLGKSQSTIANKLRILKLSKEIQEKLLENDLTERHARALLRLPDEELQKK
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VLEVIVKKKLNVSQTEKLVQEMIDKITKRPEVSQKNGKKMMKFYKDIRIFVNTIKQTVEA
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKRSGVNAEYTQREEDEYLEFVIRIPKK
HHHCCCCCHHHHCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVSNKALEIVYLPIEAIRPNPYQPRKTFDIENLEELAESIKIYGVLQPITVRMVGNNSYE
CCCCCEEEEEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCEEEEEECCCCEE
LVAGERRWRASKLAGLKEVPAIVINAHDQDSAILSLIENLQRENLNFIEEAQAYYNLIND
EEECHHHHHHHHHCCHHHCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
HHLTQEQLAKVLGKSQSTIANKLRILKLSKEIQEKLLENDLTERHARALLRLPDEELQKK
CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VLEVIVKKKLNVSQTEKLVQEMIDKITKRPEVSQKNGKKMMKFYKDIRIFVNTIKQTVEA
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKRSGVNAEYTQREEDEYLEFVIRIPKK
HHHCCCCCHHHHCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA