| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is yybT [H]
Identifier: 20809105
GI number: 20809105
Start: 2667325
End: 2669292
Strand: Reverse
Name: yybT [H]
Synonym: TTE2776
Alternate gene names: 20809105
Gene position: 2669292-2667325 (Counterclockwise)
Preceding gene: 20809106
Following gene: 20809104
Centisome position: 99.25
GC content: 36.94
Gene sequence:
>1968_bases GTGGATAAAAAATTTTATAGGATAATATCTTCCATAAACATCTTAAACCTCTTGCTATCTGCTTTCTTAATAGGGTTTTT ATTTTATTACAACAAAATAATCGCTTCTATTTCTTTTATCATCCTTTTATACATACTTTTGGCAGAATACTATGGGGTAA AGAGGAAAAAGATAGAGCTTGACAGGTACATAGAGGATATATTTTTCAGTGTGGACAAGGCTTCAAAAACTGTCTTGGCA AAGATTCCGCTTCCTGCTGTTATTTTAAATGACAGAGGAGAAATTATATGGTATAACACCCATTATTCTCAAACCTTTAA TGAAAATGAAGAGATAAAAAAGCTCATAAAAAAGTATGTCACAGCAAAAACAGAAGAATTAAAAGGGCAGATAGAATTCA ATGGCAGATACTATTCTGTCTTGAAAATAGAATCCTCTTTCAAGAAAAAAAGAGAGGGAGATACAAGTGCTACCTTGCTC TTTTTTGACGATACAGACTATGTACAATTGAAAAAGAGCTTGGCAACTTCAAGGCCTGTTGTAGCTCATATAATGATTGA CAATTACGAAGAAGCATTGATGAGCGTGGAAGATGTAAAAAGAGCCGTCATCTCTTCTGAAATAGAGAAAAAACTCTCAG AATGGGCTTCTTCTATAAAAGCCTTTTTGAAAAAATATGATGACGACAAATACTTTGCAATTTTTAAAGAAGGAGAATTA AAAAAACTGGAAGAAAATAGATTTGACATATTAGACAAAATAAGAGAAACTGGAGAGGAAATGAGAGTCCTTCTCACCTT GAGCATAGGCGTAGGGGCAGAAGCTGACGATTTTCTCACTTTAAACGAGTACGCTTCTTCTGCTTTAGACCTTGCGCTGG GGAGGGGAGGAGACCAGGCTGTTGTAAAAAGAGGAGACAAAATATCTTTTTACGGCGGAAGGACACAGGCTGTAGAAAAA AGGACAAGAGTAAAAGCAAGAGTTATAGCCCACGCCTTAAGAGAACTTATTAAAGAATCTTCTACCATTTTTATAATGGG GCACAATTTTATGGACTTTGACTCTTTAGGTGCGGCTATTGGGATGTACAGAGCTTGTGCGGATTTGGGTAAAAAAGCTT ATATAATCCTGGACAAATCCAATGTGGCTATAGATGAGCTTGTGAAGAAAATAAAGGCAACAGATGGGTATCAAGACCTG TTTATAAAAAGTTCAGAAGTGAAAAACATGATAGATGAAAACAGCTTATTAATAGTGGTGGATACACACAGGCCAAGTTA TCTCAGCTACCCCGAAATTGTAGAATTGATTGATAGAATTGTTGTAATTGACCACCACAGAAGAGGTAAAGAATTCATTG ACAAAGCTGTGTTAGTCTACTTAGAGCCATATGCTTCTTCTGCCAGTGAGCTTGTGACTGAAATACTCCAGTATATTGTA GAAAAAGTCGATTTAAAACCGATTGAGGCAGAAGCTCTTCTTGCTGGAATAGCTGTTGACACTAAAAACTTCACTTTTAG AACAGGTTCCAGGACTTTTGAAGCGGCTTCTTTCCTGAGAAAAAAAGGAGCAGATACAACTTCTGTGAAACAGCTTTTCC AGAACGATTTGGCTTCCTACATCATAAAAGCGACTATAGTAAAAAATGCAGAAATACTTGACAATGGCATTGCAATAGCT ATAAGCCCTCCTGCTGCCAACAATTTAATAATCGCACAGGCGGCTGATGAACTTTTGACAATAAAAGGAGTAAAAGCTTC TTTTGTCCTTCTGCAGAGGGAAGAGGATGTCGCCATAAGCGGCCGTTCCATGGGAGATGTAAATGTACAAATAATACTAG AAAAATTGGGTGGAGGAGGACATTTGACTGTCGCCGGTGCACAGGTTAAAAAGCCTATGGAAGAAGTGTTAAATGAATTG AAACAGGCTATAAAAGAATACTTTGAAGAGGAAGGTGAAGATAGATGA
Upstream 100 bases:
>100_bases TTTGCTCTTTTTCCCTTTGACCTCCTGGCTTTTGGCGGTTGTGGGGATAGCTGATACGAGCCTTGACCTTAGGAAATATT TAAGGTAAAGAGGTGTCTTT
Downstream 100 bases:
>100_bases AAGTTATATTGGTAAAAGATGTAAAAAATGTGGGTAAGGCAGGAGAGGTTGTAAATGTAAGCGATGGATATGGAAGGAAT TATCTGATTCCTAAGGGACT
Product: exopolyphosphatase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 655; Mature: 655
Protein sequence:
>655_residues MDKKFYRIISSINILNLLLSAFLIGFLFYYNKIIASISFIILLYILLAEYYGVKRKKIELDRYIEDIFFSVDKASKTVLA KIPLPAVILNDRGEIIWYNTHYSQTFNENEEIKKLIKKYVTAKTEELKGQIEFNGRYYSVLKIESSFKKKREGDTSATLL FFDDTDYVQLKKSLATSRPVVAHIMIDNYEEALMSVEDVKRAVISSEIEKKLSEWASSIKAFLKKYDDDKYFAIFKEGEL KKLEENRFDILDKIRETGEEMRVLLTLSIGVGAEADDFLTLNEYASSALDLALGRGGDQAVVKRGDKISFYGGRTQAVEK RTRVKARVIAHALRELIKESSTIFIMGHNFMDFDSLGAAIGMYRACADLGKKAYIILDKSNVAIDELVKKIKATDGYQDL FIKSSEVKNMIDENSLLIVVDTHRPSYLSYPEIVELIDRIVVIDHHRRGKEFIDKAVLVYLEPYASSASELVTEILQYIV EKVDLKPIEAEALLAGIAVDTKNFTFRTGSRTFEAASFLRKKGADTTSVKQLFQNDLASYIIKATIVKNAEILDNGIAIA ISPPAANNLIIAQAADELLTIKGVKASFVLLQREEDVAISGRSMGDVNVQIILEKLGGGGHLTVAGAQVKKPMEEVLNEL KQAIKEYFEEEGEDR
Sequences:
>Translated_655_residues MDKKFYRIISSINILNLLLSAFLIGFLFYYNKIIASISFIILLYILLAEYYGVKRKKIELDRYIEDIFFSVDKASKTVLA KIPLPAVILNDRGEIIWYNTHYSQTFNENEEIKKLIKKYVTAKTEELKGQIEFNGRYYSVLKIESSFKKKREGDTSATLL FFDDTDYVQLKKSLATSRPVVAHIMIDNYEEALMSVEDVKRAVISSEIEKKLSEWASSIKAFLKKYDDDKYFAIFKEGEL KKLEENRFDILDKIRETGEEMRVLLTLSIGVGAEADDFLTLNEYASSALDLALGRGGDQAVVKRGDKISFYGGRTQAVEK RTRVKARVIAHALRELIKESSTIFIMGHNFMDFDSLGAAIGMYRACADLGKKAYIILDKSNVAIDELVKKIKATDGYQDL FIKSSEVKNMIDENSLLIVVDTHRPSYLSYPEIVELIDRIVVIDHHRRGKEFIDKAVLVYLEPYASSASELVTEILQYIV EKVDLKPIEAEALLAGIAVDTKNFTFRTGSRTFEAASFLRKKGADTTSVKQLFQNDLASYIIKATIVKNAEILDNGIAIA ISPPAANNLIIAQAADELLTIKGVKASFVLLQREEDVAISGRSMGDVNVQIILEKLGGGGHLTVAGAQVKKPMEEVLNEL KQAIKEYFEEEGEDR >Mature_655_residues MDKKFYRIISSINILNLLLSAFLIGFLFYYNKIIASISFIILLYILLAEYYGVKRKKIELDRYIEDIFFSVDKASKTVLA KIPLPAVILNDRGEIIWYNTHYSQTFNENEEIKKLIKKYVTAKTEELKGQIEFNGRYYSVLKIESSFKKKREGDTSATLL FFDDTDYVQLKKSLATSRPVVAHIMIDNYEEALMSVEDVKRAVISSEIEKKLSEWASSIKAFLKKYDDDKYFAIFKEGEL KKLEENRFDILDKIRETGEEMRVLLTLSIGVGAEADDFLTLNEYASSALDLALGRGGDQAVVKRGDKISFYGGRTQAVEK RTRVKARVIAHALRELIKESSTIFIMGHNFMDFDSLGAAIGMYRACADLGKKAYIILDKSNVAIDELVKKIKATDGYQDL FIKSSEVKNMIDENSLLIVVDTHRPSYLSYPEIVELIDRIVVIDHHRRGKEFIDKAVLVYLEPYASSASELVTEILQYIV EKVDLKPIEAEALLAGIAVDTKNFTFRTGSRTFEAASFLRKKGADTTSVKQLFQNDLASYIIKATIVKNAEILDNGIAIA ISPPAANNLIIAQAADELLTIKGVKASFVLLQREEDVAISGRSMGDVNVQIILEKLGGGGHLTVAGAQVKKPMEEVLNEL KQAIKEYFEEEGEDR
Specific function: Unknown
COG id: COG3887
COG function: function code T; Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GGDEF domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000160 - InterPro: IPR003156 - InterPro: IPR001667 - InterPro: IPR014528 [H]
Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]
EC number: NA
Molecular weight: Translated: 73853; Mature: 73853
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKKFYRIISSINILNLLLSAFLIGFLFYYNKIIASISFIILLYILLAEYYGVKRKKIEL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH DRYIEDIFFSVDKASKTVLAKIPLPAVILNDRGEIIWYNTHYSQTFNENEEIKKLIKKYV HHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHH TAKTEELKGQIEFNGRYYSVLKIESSFKKKREGDTSATLLFFDDTDYVQLKKSLATSRPV CCCHHHCCCEEEECCEEEEEEEEHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCE VAHIMIDNYEEALMSVEDVKRAVISSEIEKKLSEWASSIKAFLKKYDDDKYFAIFKEGEL EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCH KKLEENRFDILDKIRETGEEMRVLLTLSIGVGAEADDFLTLNEYASSALDLALGRGGDQA HHHHHHHHHHHHHHHHCHHHEEEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHCCCCCHH VVKRGDKISFYGGRTQAVEKRTRVKARVIAHALRELIKESSTIFIMGHNFMDFDSLGAAI HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH GMYRACADLGKKAYIILDKSNVAIDELVKKIKATDGYQDLFIKSSEVKNMIDENSLLIVV HHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCHHHHHEEHHHHHHHHCCCCEEEEE DTHRPSYLSYPEIVELIDRIVVIDHHRRGKEFIDKAVLVYLEPYASSASELVTEILQYIV ECCCCCCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHH EKVDLKPIEAEALLAGIAVDTKNFTFRTGSRTFEAASFLRKKGADTTSVKQLFQNDLASY HHCCCCCCCHHHHHHHEEEECCCCEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IIKATIVKNAEILDNGIAIAISPPAANNLIIAQAADELLTIKGVKASFVLLQREEDVAIS HHHHHHHCCHHHHCCCEEEEECCCCCCCEEEEECCCCCEEEECCCEEEEEEECCCCCEEC GRSMGDVNVQIILEKLGGGGHLTVAGAQVKKPMEEVLNELKQAIKEYFEEEGEDR CCCCCCCCCEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDKKFYRIISSINILNLLLSAFLIGFLFYYNKIIASISFIILLYILLAEYYGVKRKKIEL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH DRYIEDIFFSVDKASKTVLAKIPLPAVILNDRGEIIWYNTHYSQTFNENEEIKKLIKKYV HHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHH TAKTEELKGQIEFNGRYYSVLKIESSFKKKREGDTSATLLFFDDTDYVQLKKSLATSRPV CCCHHHCCCEEEECCEEEEEEEEHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHCCCCCE VAHIMIDNYEEALMSVEDVKRAVISSEIEKKLSEWASSIKAFLKKYDDDKYFAIFKEGEL EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCH KKLEENRFDILDKIRETGEEMRVLLTLSIGVGAEADDFLTLNEYASSALDLALGRGGDQA HHHHHHHHHHHHHHHHCHHHEEEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHCCCCCHH VVKRGDKISFYGGRTQAVEKRTRVKARVIAHALRELIKESSTIFIMGHNFMDFDSLGAAI HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH GMYRACADLGKKAYIILDKSNVAIDELVKKIKATDGYQDLFIKSSEVKNMIDENSLLIVV HHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCCCHHHHHEEHHHHHHHHCCCCEEEEE DTHRPSYLSYPEIVELIDRIVVIDHHRRGKEFIDKAVLVYLEPYASSASELVTEILQYIV ECCCCCCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHH EKVDLKPIEAEALLAGIAVDTKNFTFRTGSRTFEAASFLRKKGADTTSVKQLFQNDLASY HHCCCCCCCHHHHHHHEEEECCCCEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH IIKATIVKNAEILDNGIAIAISPPAANNLIIAQAADELLTIKGVKASFVLLQREEDVAIS HHHHHHHCCHHHHCCCEEEEECCCCCCCEEEEECCCCCEEEECCCEEEEEEECCCCCEEC GRSMGDVNVQIILEKLGGGGHLTVAGAQVKKPMEEVLNELKQAIKEYFEEEGEDR CCCCCCCCCEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]