| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is 20809074
Identifier: 20809074
GI number: 20809074
Start: 2634023
End: 2634814
Strand: Reverse
Name: 20809074
Synonym: TTE2735
Alternate gene names: NA
Gene position: 2634814-2634023 (Counterclockwise)
Preceding gene: 20809075
Following gene: 20809073
Centisome position: 97.97
GC content: 33.71
Gene sequence:
>792_bases ATGATTAGACTGTATTTAGAAGGTGCAAAATGTGAAATAAAGAGAATGCTTCAATACAAAGCAAATTCACTATTTTACTT AACAGTTGTCCTCATTCCGCCTTTAGCCCTTTTCTTCCTCTGGAAGACAATACTTTCCCATGGAGGAAGCATTGGAGGAT ATAACCTTTCAGATATGGTTACATATTTTATTGTGACACAATTTTTTGTAATGAATACTCCTTATTCTGCTTGGATAGAA ATAGGGGAAAGTATAAAAGATGGAAGTTTAAGCCTTTGGCTTACAAAGCCCGTGAACCATTATCTTCTTTATCTTTTTAG GCTTATTGGCTCATGGATTTTACAGTGGATCTTTGGAATCGCAGGAGTTATAGTGGTATCAATTATACTAAAAGATTATG TTGTAATTCCAAAGGAAGCCAGTACATATTTTTTAAGTATTTTATTTTGGATGGGTGGAATAGTAATAGGGTTTAGTTAT GGTTATATACTTAACCTTTTGAGTTTTTGGTTTGAGAGAAGTACATACATTATATATTTTTCTGAAGGGATTGTTGCACT TTTATCTGGTATGCTGATTCCGCTGGATTTGCTGCCAGCTAAAAGCCTATGGCTTTTTTTGCCCTTTAAGTTTTGCGGCT ATGTACCAGCACAAATATTTTTAGGGAAAATATCGGGATTAGATATTGTTTTTGAGTTTGTTTCAATGGCAATTTGGATA TTTGTTTTAGTATCATTAAGCCATTTAGTCTTTAAAATAGGAAGTAGGAGATTTACTGCGTCGGGAGGATAA
Upstream 100 bases:
>100_bases GCGAAAGAAATTTTAAACAAATACAATATTTCAGATATTGAGATTATGGATCCAACATTAGAAGAAGTGGTGTATAGATT CTACAGTGAGGGGAAGGAAA
Downstream 100 bases:
>100_bases TAAAATGAGGTTTATAAAGTCCCTTTTTAAATTGAGGCTAAAAATGGATTTGGCCTTTAGGGTTGATGCATTCTTCAACT TTTTTACCCAACTGGTTTAT
Product: ABC-type multidrug transport system, permease component
Products: NA
Alternate protein names: Daunorubicin Resistance Transmembrane Protein; ABC-Type Transport System Permease Component; Abc Transporter Integral Membrane Protein; Daunorubicin Resistance ABC Transporter Permease; Multidrug ABC Transporter; ABC Transporter Permease Protein; ABC-2 Type Transport System Permease Protein
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MIRLYLEGAKCEIKRMLQYKANSLFYLTVVLIPPLALFFLWKTILSHGGSIGGYNLSDMVTYFIVTQFFVMNTPYSAWIE IGESIKDGSLSLWLTKPVNHYLLYLFRLIGSWILQWIFGIAGVIVVSIILKDYVVIPKEASTYFLSILFWMGGIVIGFSY GYILNLLSFWFERSTYIIYFSEGIVALLSGMLIPLDLLPAKSLWLFLPFKFCGYVPAQIFLGKISGLDIVFEFVSMAIWI FVLVSLSHLVFKIGSRRFTASGG
Sequences:
>Translated_263_residues MIRLYLEGAKCEIKRMLQYKANSLFYLTVVLIPPLALFFLWKTILSHGGSIGGYNLSDMVTYFIVTQFFVMNTPYSAWIE IGESIKDGSLSLWLTKPVNHYLLYLFRLIGSWILQWIFGIAGVIVVSIILKDYVVIPKEASTYFLSILFWMGGIVIGFSY GYILNLLSFWFERSTYIIYFSEGIVALLSGMLIPLDLLPAKSLWLFLPFKFCGYVPAQIFLGKISGLDIVFEFVSMAIWI FVLVSLSHLVFKIGSRRFTASGG >Mature_263_residues MIRLYLEGAKCEIKRMLQYKANSLFYLTVVLIPPLALFFLWKTILSHGGSIGGYNLSDMVTYFIVTQFFVMNTPYSAWIE IGESIKDGSLSLWLTKPVNHYLLYLFRLIGSWILQWIFGIAGVIVVSIILKDYVVIPKEASTYFLSILFWMGGIVIGFSY GYILNLLSFWFERSTYIIYFSEGIVALLSGMLIPLDLLPAKSLWLFLPFKFCGYVPAQIFLGKISGLDIVFEFVSMAIWI FVLVSLSHLVFKIGSRRFTASGG
Specific function: Unknown
COG id: COG4587
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29945; Mature: 29945
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLYLEGAKCEIKRMLQYKANSLFYLTVVLIPPLALFFLWKTILSHGGSIGGYNLSDMV CEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH TYFIVTQFFVMNTPYSAWIEIGESIKDGSLSLWLTKPVNHYLLYLFRLIGSWILQWIFGI HHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH AGVIVVSIILKDYVVIPKEASTYFLSILFWMGGIVIGFSYGYILNLLSFWFERSTYIIYF HHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE SEGIVALLSGMLIPLDLLPAKSLWLFLPFKFCGYVPAQIFLGKISGLDIVFEFVSMAIWI CCCHHHHHCCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHH FVLVSLSHLVFKIGSRRFTASGG HHHHHHHHHHHHHCCCEEECCCC >Mature Secondary Structure MIRLYLEGAKCEIKRMLQYKANSLFYLTVVLIPPLALFFLWKTILSHGGSIGGYNLSDMV CEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH TYFIVTQFFVMNTPYSAWIEIGESIKDGSLSLWLTKPVNHYLLYLFRLIGSWILQWIFGI HHHHHHHHHHHCCCHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH AGVIVVSIILKDYVVIPKEASTYFLSILFWMGGIVIGFSYGYILNLLSFWFERSTYIIYF HHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE SEGIVALLSGMLIPLDLLPAKSLWLFLPFKFCGYVPAQIFLGKISGLDIVFEFVSMAIWI CCCHHHHHCCHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHH FVLVSLSHLVFKIGSRRFTASGG HHHHHHHHHHHHHCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA