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The map label for this gene is yvdE [H]

Identifier: 20809043

GI number: 20809043

Start: 2596160

End: 2596897

Strand: Direct

Name: yvdE [H]

Synonym: TTE2700

Alternate gene names: 20809043

Gene position: 2596160-2596897 (Clockwise)

Preceding gene: 20809037

Following gene: 20809050

Centisome position: 96.53

GC content: 39.7

Gene sequence:

>738_bases
ATGAATAAACCTATCATAGGTATTGTGGGAAACATAAGCTATGAGACTGAGGGAGTGATGATCGGAGAAGAAAGAATTTA
TGTAATGAGACCTTATGTAGAATCAGTTCTAAAAGCCGGGGGCGTGCCTGTAGTTTTACCTATAGTCTTGGACAAAGACA
CACTAAAAAAACAGGTGGAAAAAGTAGATGGAATTTTAATAACTGGAGGACAAGATGTAAATCCCCTACTTTACAACGAA
GAACCCATTGAAAAACAGGGTGGAATTACTCCTGACAGGGACTGGTACGATATTGAAGTCATAAAGTACGCTTATTCACT
TAAAAAACCCATTCTGGGAATATGCAGAGGCATTCAAGTGATGAACGTAGCTTTAGGAGGGACTTTATATCAAGACATAT
CTCAAATCCCTACAGCTTACATAAAGCATTCTCAAAGAGCAAAGCCCGATTTACCCACCCATACGGTAGAAATAAAAGAA
GGAAGCAGGCTGTATAATATCTTGGGCAAAACCATTGCAGTGAACAGCTTTCACCATCAGGCAGTAAAAGAGGTGGCAGA
GGGCTTCAAAATAGTAGCCCAATCCAAAGATGGAGTTATAGAAGCAATTGAGCTTGAAAAAGAGGACTATTTTGTGGTGG
GAGTTCAGTGGCATCCGGAGCTTATGGCTTACAAAGGAAATGAAAAAATGCTGGAGATATTTAAACAACTTGTAAAGGCC
TGCCTCAAGAACGAATAA

Upstream 100 bases:

>100_bases
TTTTAACTTGTTGTCAGACATCTAACCATCTCTTATTAATTTTTTAAAGTACAAAATATGGTATAATAATAACTGACCAA
TAAAGAACAGGGGGAGAAAC

Downstream 100 bases:

>100_bases
GTGTCCTATGGCATCCTCGGAACAGTAGCCTCTGGACTCATTCCTATTCTGCTCCCTCTTTACTTCTTTTTTCATCGGCT
TTCTAGTGAGAGAAGAAAGC

Product: glutamine amidotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MNKPIIGIVGNISYETEGVMIGEERIYVMRPYVESVLKAGGVPVVLPIVLDKDTLKKQVEKVDGILITGGQDVNPLLYNE
EPIEKQGGITPDRDWYDIEVIKYAYSLKKPILGICRGIQVMNVALGGTLYQDISQIPTAYIKHSQRAKPDLPTHTVEIKE
GSRLYNILGKTIAVNSFHHQAVKEVAEGFKIVAQSKDGVIEAIELEKEDYFVVGVQWHPELMAYKGNEKMLEIFKQLVKA
CLKNE

Sequences:

>Translated_245_residues
MNKPIIGIVGNISYETEGVMIGEERIYVMRPYVESVLKAGGVPVVLPIVLDKDTLKKQVEKVDGILITGGQDVNPLLYNE
EPIEKQGGITPDRDWYDIEVIKYAYSLKKPILGICRGIQVMNVALGGTLYQDISQIPTAYIKHSQRAKPDLPTHTVEIKE
GSRLYNILGKTIAVNSFHHQAVKEVAEGFKIVAQSKDGVIEAIELEKEDYFVVGVQWHPELMAYKGNEKMLEIFKQLVKA
CLKNE
>Mature_245_residues
MNKPIIGIVGNISYETEGVMIGEERIYVMRPYVESVLKAGGVPVVLPIVLDKDTLKKQVEKVDGILITGGQDVNPLLYNE
EPIEKQGGITPDRDWYDIEVIKYAYSLKKPILGICRGIQVMNVALGGTLYQDISQIPTAYIKHSQRAKPDLPTHTVEIKE
GSRLYNILGKTIAVNSFHHQAVKEVAEGFKIVAQSKDGVIEAIELEKEDYFVVGVQWHPELMAYKGNEKMLEIFKQLVKA
CLKNE

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=254, Percent_Identity=32.6771653543307, Blast_Score=124, Evalue=7e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 27438; Mature: 27438

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKPIIGIVGNISYETEGVMIGEERIYVMRPYVESVLKAGGVPVVLPIVLDKDTLKKQVE
CCCCEEEEEECCEECCCEEEECCCEEEEECHHHHHHHHCCCCCEEEEEEECHHHHHHHHH
KVDGILITGGQDVNPLLYNEEPIEKQGGITPDRDWYDIEVIKYAYSLKKPILGICRGIQV
HHCCEEEECCCCCCCCEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MNVALGGTLYQDISQIPTAYIKHSQRAKPDLPTHTVEIKEGSRLYNILGKTIAVNSFHHQ
HHHHHCCHHHHHHHHCCHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHEECHHHHH
AVKEVAEGFKIVAQSKDGVIEAIELEKEDYFVVGVQWHPELMAYKGNEKMLEIFKQLVKA
HHHHHHHHHEEEECCCCCCEEEEEECCCCEEEEEEEECCCEEEECCCHHHHHHHHHHHHH
CLKNE
HHCCC
>Mature Secondary Structure
MNKPIIGIVGNISYETEGVMIGEERIYVMRPYVESVLKAGGVPVVLPIVLDKDTLKKQVE
CCCCEEEEEECCEECCCEEEECCCEEEEECHHHHHHHHCCCCCEEEEEEECHHHHHHHHH
KVDGILITGGQDVNPLLYNEEPIEKQGGITPDRDWYDIEVIKYAYSLKKPILGICRGIQV
HHCCEEEECCCCCCCCEECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MNVALGGTLYQDISQIPTAYIKHSQRAKPDLPTHTVEIKEGSRLYNILGKTIAVNSFHHQ
HHHHHCCHHHHHHHHCCHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHEECHHHHH
AVKEVAEGFKIVAQSKDGVIEAIELEKEDYFVVGVQWHPELMAYKGNEKMLEIFKQLVKA
HHHHHHHHHEEEECCCCCCEEEEEECCCCEEEEEEEECCCEEEECCCHHHHHHHHHHHHH
CLKNE
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]