Definition Thermoanaerobacter tengcongensis MB4, complete genome.
Accession NC_003869
Length 2,689,445

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The map label for this gene is yurY [H]

Identifier: 20809017

GI number: 20809017

Start: 2571495

End: 2572241

Strand: Reverse

Name: yurY [H]

Synonym: TTE2673

Alternate gene names: 20809017

Gene position: 2572241-2571495 (Counterclockwise)

Preceding gene: 20809018

Following gene: 20809016

Centisome position: 95.64

GC content: 38.29

Gene sequence:

>747_bases
ATGAAAGAGGCTTTGCTTGAAATAAAGGATTTACATGTAGAAGTAGAGGATAAACACATTTTAAAAGGGCTTAATTTGAC
CATAAAAAAGGGAGAGATACATGCAATCATGGGGCCTAATGGCAGTGGCAAGAGCACATTGTGCCATGCCATAATGGGCA
ACCCTAGATATAGAATCACTGGCGGAGAAATTTTGTTTGAAGGAGAAAATATTACGAATTTAAAAGTAAATGAAAGGGCA
AAGAAGGGTATATTTTTGTCATTCCAGTCGCCGGAAGAGATTCCCGGTATTACGGTCGATAACTTTATAAGGACTTCTTC
CACTATCGTCACAGGGCAGAACATGTCAATGCTTCAGTTTGCGAAGGAAATGCAAAAAATGCTGGAACTTTTGGACATGA
GCGCCGAATACAGGACGAGATATCTCAATGTAGGATTTTCTGGCGGTGAAAAGAAAAAGACAGAAGTGCTTCAGATGGCT
TTTTTAAAGCCAAAGCTTGTGATGCTGGATGAAATAGATTCAGGGCTTGATATAGATGCGCTGAAAGTTGTTGCTGAAAC
TATAAAAAAATTAAAAACCGAGGATATGGCGATTCTGGTAGTCACTCACTATAACAGAATATTAAATTATTTAGAACCTG
ATGTTATATCTGTCTTGATGGATGGAAAGATTGTCAAAGAGGGAGATAAAGAGCTTGCTAGAATATTAGAAGAAAAGGGC
TATGACTTTGTGAGAAATGGCGCATAG

Upstream 100 bases:

>100_bases
TTATCCCTTCTTTTATTGATTTAAGAATTTTTGTGGTGTATAATAATATTGTTCGAGTATTCCTATAAAAATAGTCGGAA
TTAAAAAGGAGTTGTAAGAG

Downstream 100 bases:

>100_bases
CCCTTGAGGAGGAATGAGCATGAGAAAGGAAGAGATTAGGGAGATAGATTTTAGCATATACAATATAAAGGACGAGGTTG
AATACGAGTTTCAGACAGGT

Product: Iron-regulated ABC transporter ATPase subunit SufC

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKEALLEIKDLHVEVEDKHILKGLNLTIKKGEIHAIMGPNGSGKSTLCHAIMGNPRYRITGGEILFEGENITNLKVNERA
KKGIFLSFQSPEEIPGITVDNFIRTSSTIVTGQNMSMLQFAKEMQKMLELLDMSAEYRTRYLNVGFSGGEKKKTEVLQMA
FLKPKLVMLDEIDSGLDIDALKVVAETIKKLKTEDMAILVVTHYNRILNYLEPDVISVLMDGKIVKEGDKELARILEEKG
YDFVRNGA

Sequences:

>Translated_248_residues
MKEALLEIKDLHVEVEDKHILKGLNLTIKKGEIHAIMGPNGSGKSTLCHAIMGNPRYRITGGEILFEGENITNLKVNERA
KKGIFLSFQSPEEIPGITVDNFIRTSSTIVTGQNMSMLQFAKEMQKMLELLDMSAEYRTRYLNVGFSGGEKKKTEVLQMA
FLKPKLVMLDEIDSGLDIDALKVVAETIKKLKTEDMAILVVTHYNRILNYLEPDVISVLMDGKIVKEGDKELARILEEKG
YDFVRNGA
>Mature_248_residues
MKEALLEIKDLHVEVEDKHILKGLNLTIKKGEIHAIMGPNGSGKSTLCHAIMGNPRYRITGGEILFEGENITNLKVNERA
KKGIFLSFQSPEEIPGITVDNFIRTSSTIVTGQNMSMLQFAKEMQKMLELLDMSAEYRTRYLNVGFSGGEKKKTEVLQMA
FLKPKLVMLDEIDSGLDIDALKVVAETIKKLKTEDMAILVVTHYNRILNYLEPDVISVLMDGKIVKEGDKELARILEEKG
YDFVRNGA

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI42741659, Length=230, Percent_Identity=28.695652173913, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI9961252, Length=226, Percent_Identity=27.8761061946903, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI4505771, Length=226, Percent_Identity=27.8761061946903, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI148612844, Length=220, Percent_Identity=30.4545454545455, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI255708477, Length=220, Percent_Identity=30.4545454545455, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI9961250, Length=231, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI73747915, Length=242, Percent_Identity=25.2066115702479, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI21536378, Length=239, Percent_Identity=25.5230125523013, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI9955966, Length=215, Percent_Identity=25.5813953488372, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI45243524, Length=215, Percent_Identity=25.5813953488372, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1787972, Length=244, Percent_Identity=49.1803278688525, Blast_Score=245, Evalue=2e-66,
Organism=Escherichia coli, GI1787029, Length=201, Percent_Identity=27.8606965174129, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI48994883, Length=217, Percent_Identity=30.4147465437788, Blast_Score=77, Evalue=8e-16,
Organism=Escherichia coli, GI1788506, Length=239, Percent_Identity=27.1966527196653, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786698, Length=232, Percent_Identity=28.0172413793103, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1788225, Length=232, Percent_Identity=28.0172413793103, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1790162, Length=205, Percent_Identity=27.8048780487805, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI87081709, Length=236, Percent_Identity=22.8813559322034, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1789672, Length=198, Percent_Identity=30.3030303030303, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1788897, Length=210, Percent_Identity=28.0952380952381, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788210, Length=208, Percent_Identity=26.4423076923077, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1789864, Length=245, Percent_Identity=25.3061224489796, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787370, Length=212, Percent_Identity=26.4150943396226, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI87081791, Length=230, Percent_Identity=27.8260869565217, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787792, Length=229, Percent_Identity=25.764192139738, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789593, Length=227, Percent_Identity=24.6696035242291, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87082268, Length=243, Percent_Identity=25.9259259259259, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789991, Length=221, Percent_Identity=26.6968325791855, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789891, Length=219, Percent_Identity=29.2237442922374, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786398, Length=218, Percent_Identity=24.3119266055046, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786654, Length=234, Percent_Identity=23.9316239316239, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787759, Length=242, Percent_Identity=26.0330578512397, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788472, Length=223, Percent_Identity=26.0089686098655, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787105, Length=229, Percent_Identity=26.6375545851528, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1787500, Length=245, Percent_Identity=26.530612244898, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1788761, Length=200, Percent_Identity=26, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786563, Length=200, Percent_Identity=26.5, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1788450, Length=229, Percent_Identity=27.5109170305677, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1786319, Length=189, Percent_Identity=26.984126984127, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI48995001, Length=210, Percent_Identity=27.6190476190476, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1786975, Length=222, Percent_Identity=28.3783783783784, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1789032, Length=251, Percent_Identity=26.2948207171315, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI87081834, Length=190, Percent_Identity=27.8947368421053, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1789962, Length=220, Percent_Identity=25.9090909090909, Blast_Score=61, Evalue=7e-11,
Organism=Escherichia coli, GI1790190, Length=238, Percent_Identity=23.9495798319328, Blast_Score=60, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17541710, Length=241, Percent_Identity=27.3858921161826, Blast_Score=85, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI71996809, Length=219, Percent_Identity=28.7671232876712, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI212646699, Length=238, Percent_Identity=27.3109243697479, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI25146777, Length=233, Percent_Identity=29.1845493562232, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI193211017, Length=219, Percent_Identity=28.310502283105, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI193211015, Length=219, Percent_Identity=28.310502283105, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193202349, Length=220, Percent_Identity=29.5454545454545, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193209708, Length=231, Percent_Identity=29.004329004329, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17565938, Length=219, Percent_Identity=28.310502283105, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17543740, Length=213, Percent_Identity=29.1079812206573, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI161076684, Length=246, Percent_Identity=27.2357723577236, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24581617, Length=246, Percent_Identity=27.2357723577236, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24581615, Length=246, Percent_Identity=27.2357723577236, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI161076682, Length=246, Percent_Identity=27.2357723577236, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574744, Length=214, Percent_Identity=27.1028037383178, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI28574533, Length=234, Percent_Identity=28.2051282051282, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI281363262, Length=218, Percent_Identity=29.3577981651376, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24659289, Length=214, Percent_Identity=27.1028037383178, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24653245, Length=218, Percent_Identity=29.3577981651376, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21357907, Length=226, Percent_Identity=25.2212389380531, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI45552199, Length=240, Percent_Identity=25.8333333333333, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24581407, Length=240, Percent_Identity=25.8333333333333, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI19920532, Length=231, Percent_Identity=25.1082251082251, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24580930, Length=231, Percent_Identity=25.1082251082251, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI85726357, Length=229, Percent_Identity=27.0742358078603, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24581191, Length=217, Percent_Identity=25.3456221198157, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581189, Length=217, Percent_Identity=25.3456221198157, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581193, Length=217, Percent_Identity=25.3456221198157, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581195, Length=217, Percent_Identity=25.3456221198157, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17136662, Length=229, Percent_Identity=26.2008733624454, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27846; Mature: 27846

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MKEALLEIKDLHVEVEDKHILKGLNLTIKKGEIHAIMGPNGSGKSTLCHAIMGNPRYRIT
CCCHHHHHHHCEEEECCHHHHCCCCEEEECCEEEEEECCCCCCHHHHHHHHHCCCEEEEE
GGEILFEGENITNLKVNERAKKGIFLSFQSPEEIPGITVDNFIRTSSTIVTGQNMSMLQF
CCEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHCCCCEEEECCCCHHHHH
AKEMQKMLELLDMSAEYRTRYLNVGFSGGEKKKTEVLQMAFLKPKLVMLDEIDSGLDIDA
HHHHHHHHHHHCCCHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHH
LKVVAETIKKLKTEDMAILVVTHYNRILNYLEPDVISVLMDGKIVKEGDKELARILEEKG
HHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHCHHHHHHHHCCEEEECCHHHHHHHHHHCC
YDFVRNGA
CCHHCCCC
>Mature Secondary Structure
MKEALLEIKDLHVEVEDKHILKGLNLTIKKGEIHAIMGPNGSGKSTLCHAIMGNPRYRIT
CCCHHHHHHHCEEEECCHHHHCCCCEEEECCEEEEEECCCCCCHHHHHHHHHCCCEEEEE
GGEILFEGENITNLKVNERAKKGIFLSFQSPEEIPGITVDNFIRTSSTIVTGQNMSMLQF
CCEEEECCCCEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHCCCCEEEECCCCHHHHH
AKEMQKMLELLDMSAEYRTRYLNVGFSGGEKKKTEVLQMAFLKPKLVMLDEIDSGLDIDA
HHHHHHHHHHHCCCHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHH
LKVVAETIKKLKTEDMAILVVTHYNRILNYLEPDVISVLMDGKIVKEGDKELARILEEKG
HHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHCHHHHHHHHCCEEEECCHHHHHHHHHHCC
YDFVRNGA
CCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]