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The map label for this gene is IscU [H]

Identifier: 20809013

GI number: 20809013

Start: 2567387

End: 2567803

Strand: Reverse

Name: IscU [H]

Synonym: TTE2669

Alternate gene names: 20809013

Gene position: 2567803-2567387 (Counterclockwise)

Preceding gene: 20809014

Following gene: 20809011

Centisome position: 95.48

GC content: 38.61

Gene sequence:

>417_bases
ATGAGCGATTTAAATCAACTTTATTCAGAGATAATAATGGAACATTATGAAAATTCTCCTCACAGAAGAGAGTTGAAGGA
AGCAACCCTCAAGGAAAGGGGACACAATCCCCTTTGTGGAGATGATATTACAATATACCTTAAAATAAATGGGGACGTAA
TAGAAGATGCCTCTTTTACAGGTCACGGCTGTGCCATAAGTCAGGCTTCTACTTCCATGATGATTGACCTCATAAAAGGG
AAGGATAAAAAAGAGGCTTTAAGGCTTGTACAGAAATTTATAGACATGATACACAAAAAAGACGTGGATTTAGAAGAATT
GGGAGATGCTCAAGTACTGCAGGGTGTTTCAGACTTTCCTGCCCGTGTAAAATGCGCTTTACTGGCCTGGAAAACTCTTC
AAGATACACTTAAGTAA

Upstream 100 bases:

>100_bases
GGGTTCCTGCCACTGTGAGAGCCAGCTTTTACCTTTACAATGACTTTGATGACATAGATGCCCTTGTGGAAGCACTTAAA
AAAGTCAGGAAGTGGTTTAA

Downstream 100 bases:

>100_bases
ACATTCAGACAGAGGGGACGGTTCCTTTTGTCCGGATTTTCAGACACAGGGAACCGTCCCTTTTGTCTGGTTTTATGGTT
TTGCTGGAATAATCGAAGTT

Product: NifU homologs involved in Fe-S cluster formation

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSDLNQLYSEIIMEHYENSPHRRELKEATLKERGHNPLCGDDITIYLKINGDVIEDASFTGHGCAISQASTSMMIDLIKG
KDKKEALRLVQKFIDMIHKKDVDLEELGDAQVLQGVSDFPARVKCALLAWKTLQDTLK

Sequences:

>Translated_138_residues
MSDLNQLYSEIIMEHYENSPHRRELKEATLKERGHNPLCGDDITIYLKINGDVIEDASFTGHGCAISQASTSMMIDLIKG
KDKKEALRLVQKFIDMIHKKDVDLEELGDAQVLQGVSDFPARVKCALLAWKTLQDTLK
>Mature_137_residues
SDLNQLYSEIIMEHYENSPHRRELKEATLKERGHNPLCGDDITIYLKINGDVIEDASFTGHGCAISQASTSMMIDLIKGK
DKKEALRLVQKFIDMIHKKDVDLEELGDAQVLQGVSDFPARVKCALLAWKTLQDTLK

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 15587; Mature: 15456

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDLNQLYSEIIMEHYENSPHRRELKEATLKERGHNPLCGDDITIYLKINGDVIEDASFT
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEECCCCCC
GHGCAISQASTSMMIDLIKGKDKKEALRLVQKFIDMIHKKDVDLEELGDAQVLQGVSDFP
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHCCCCCC
ARVKCALLAWKTLQDTLK
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SDLNQLYSEIIMEHYENSPHRRELKEATLKERGHNPLCGDDITIYLKINGDVIEDASFT
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEECCCCCC
GHGCAISQASTSMMIDLIKGKDKKEALRLVQKFIDMIHKKDVDLEELGDAQVLQGVSDFP
CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHCCCCCC
ARVKCALLAWKTLQDTLK
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]