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The map label for this gene is 20808980

Identifier: 20808980

GI number: 20808980

Start: 2527058

End: 2527978

Strand: Reverse

Name: 20808980

Synonym: TTE2635

Alternate gene names: NA

Gene position: 2527978-2527058 (Counterclockwise)

Preceding gene: 20808981

Following gene: 20808979

Centisome position: 94.0

GC content: 30.51

Gene sequence:

>921_bases
ATGAGAAATTACGAGTGTAAATTGCAAATAGTGACTCCAATAATAATGAGTGGTGCAAGAAAAAATTTGCTTGAATTAAG
AGAGCAATCTATTAACGGTATTCTGAGATGGTGGTTTAGATTTTATGGAAGTTTGAAATATCAAAGTCTTCAGGAACTGC
GAAAAAGAGAAAGTGAAATTTTTGGTTCCACGACCAAAGCCAAAAGATTTTATATAAAGATCCTTCAAGAACCACAAAGT
AGAGGAAAAGCATACTTGTGCATGAATGACAGGAGAAAAAAAGGAGAAAAGGGTGCTGCAGTGAATTACAGTGAAAGGGT
AAGGACTTCTTACGCACCTAATCAAGAGTTTATTTTAAATTTCAAATTTATGCCTCATTTTCCAAAAGAACATGAAAAAG
AGCTTAAAAATTCGCTGATGTGTTTAAGTTTATTTGGTGGTATTGGTGCTAGATGGAGGAGAGGTTTTGGAAGTATAATT
GTAAAAGAATTTGCTTTTTATGGTGAGGAATTAGAAGGGATTGGAAAAGAAATAAATAAGAGATTAGAAGAATTAAATAT
AAAAAACAGCTTAAAAATTAAACCTTTTGAAGAATTTATTAATTTTAGAAATACAAACATATTCTTAATCAAACCTAAAA
ATAGTTTTTGGGATTCTTATGAAAGTGCGATGAATGATTTGCGTGATAATTTCTATAGAGCTCTAAAACATGAGCTAAAA
ATTTCAGAGCTTTCTTATTCTCCTAGAGAAAGCAGAAGAAAAGCTTCTCCTTTAATAATACAAATAAAGAAAAATGTAAA
AAATCATTACTTTGGAGTGATTTTAATATGGCAAGAGTGGCCTCAAAAAAAAGCAGCTGAAGATTTTTTAACAAAATTAG
AAAAGTACGAATTTATAGGGATTAATCTTCCAGGAGAGTGA

Upstream 100 bases:

>100_bases
AAGAAGGGAAATTGTATTTAAGATATGACAAGAGTTTTGAAAAAAAGATTTTAAAGTGTTTAAAAAAGTATGTGTGAGTT
TCAATAAGAAGGTGAGAATA

Downstream 100 bases:

>100_bases
AAGGTCATGATAAGGTTTAAAATTACCCCTTACGATGTGTTTTTCTTTGGCTCGGGAAGGCCTTTTAATGTAGGTGATGT
AGTATATTCCATTTTTCCTC

Product: nucleic acid-binding protein

Products: NA

Alternate protein names: Cmr1 Family CRISPR-Associated RAMP Protein; CRISPR-Associated RAMP Protein; Cytoplasmic Protein; CRISPR-Associated RAMP Cmr1 Family Protein; CRISPR-Associated Ramp Protein Cmr1 Family

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MRNYECKLQIVTPIIMSGARKNLLELREQSINGILRWWFRFYGSLKYQSLQELRKRESEIFGSTTKAKRFYIKILQEPQS
RGKAYLCMNDRRKKGEKGAAVNYSERVRTSYAPNQEFILNFKFMPHFPKEHEKELKNSLMCLSLFGGIGARWRRGFGSII
VKEFAFYGEELEGIGKEINKRLEELNIKNSLKIKPFEEFINFRNTNIFLIKPKNSFWDSYESAMNDLRDNFYRALKHELK
ISELSYSPRESRRKASPLIIQIKKNVKNHYFGVILIWQEWPQKKAAEDFLTKLEKYEFIGINLPGE

Sequences:

>Translated_306_residues
MRNYECKLQIVTPIIMSGARKNLLELREQSINGILRWWFRFYGSLKYQSLQELRKRESEIFGSTTKAKRFYIKILQEPQS
RGKAYLCMNDRRKKGEKGAAVNYSERVRTSYAPNQEFILNFKFMPHFPKEHEKELKNSLMCLSLFGGIGARWRRGFGSII
VKEFAFYGEELEGIGKEINKRLEELNIKNSLKIKPFEEFINFRNTNIFLIKPKNSFWDSYESAMNDLRDNFYRALKHELK
ISELSYSPRESRRKASPLIIQIKKNVKNHYFGVILIWQEWPQKKAAEDFLTKLEKYEFIGINLPGE
>Mature_306_residues
MRNYECKLQIVTPIIMSGARKNLLELREQSINGILRWWFRFYGSLKYQSLQELRKRESEIFGSTTKAKRFYIKILQEPQS
RGKAYLCMNDRRKKGEKGAAVNYSERVRTSYAPNQEFILNFKFMPHFPKEHEKELKNSLMCLSLFGGIGARWRRGFGSII
VKEFAFYGEELEGIGKEINKRLEELNIKNSLKIKPFEEFINFRNTNIFLIKPKNSFWDSYESAMNDLRDNFYRALKHELK
ISELSYSPRESRRKASPLIIQIKKNVKNHYFGVILIWQEWPQKKAAEDFLTKLEKYEFIGINLPGE

Specific function: Unknown

COG id: COG1367

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36343; Mature: 36343

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNYECKLQIVTPIIMSGARKNLLELREQSINGILRWWFRFYGSLKYQSLQELRKRESEI
CCCCEEEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FGSTTKAKRFYIKILQEPQSRGKAYLCMNDRRKKGEKGAAVNYSERVRTSYAPNQEFILN
HCCCHHHHHHHHHHHHCHHHCCCEEEEECCHHCCCCCCCCCCHHHHHHHCCCCCCEEEEE
FKFMPHFPKEHEKELKNSLMCLSLFGGIGARWRRGFGSIIVKEFAFYGEELEGIGKEINK
EEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLEELNIKNSLKIKPFEEFINFRNTNIFLIKPKNSFWDSYESAMNDLRDNFYRALKHELK
HHHHCCCCCCCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ISELSYSPRESRRKASPLIIQIKKNVKNHYFGVILIWQEWPQKKAAEDFLTKLEKYEFIG
HHHCCCCCHHHHHCCCCEEEEEEHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHCEEEE
INLPGE
EECCCC
>Mature Secondary Structure
MRNYECKLQIVTPIIMSGARKNLLELREQSINGILRWWFRFYGSLKYQSLQELRKRESEI
CCCCEEEEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
FGSTTKAKRFYIKILQEPQSRGKAYLCMNDRRKKGEKGAAVNYSERVRTSYAPNQEFILN
HCCCHHHHHHHHHHHHCHHHCCCEEEEECCHHCCCCCCCCCCHHHHHHHCCCCCCEEEEE
FKFMPHFPKEHEKELKNSLMCLSLFGGIGARWRRGFGSIIVKEFAFYGEELEGIGKEINK
EEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLEELNIKNSLKIKPFEEFINFRNTNIFLIKPKNSFWDSYESAMNDLRDNFYRALKHELK
HHHHCCCCCCCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ISELSYSPRESRRKASPLIIQIKKNVKNHYFGVILIWQEWPQKKAAEDFLTKLEKYEFIG
HHHCCCCCHHHHHCCCCEEEEEEHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHCEEEE
INLPGE
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA