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The map label for this gene is 20808976

Identifier: 20808976

GI number: 20808976

Start: 2523470

End: 2524447

Strand: Reverse

Name: 20808976

Synonym: TTE2631

Alternate gene names: NA

Gene position: 2524447-2523470 (Counterclockwise)

Preceding gene: 20808977

Following gene: 20808975

Centisome position: 93.86

GC content: 34.15

Gene sequence:

>978_bases
ATGATAAAAAATTTTTCAAATTTAATAGAAACAGTGTACAAAAATGATTCAGAGATTACCTGGGAGAAGTGTGAAAATTT
TTCTCTAGCATTTTCAAAATTAATAAGGAGAGAATTAATTGAAGGTACAGAAGGGAAGAGAAAAAACATATTCCTAAACA
GTCTTACCAGATACTCCATAAAGGGAATAGATATTGTTAATCTTTTTTCTCGAGTTAATCTTCAAATTGAAGACCTTTCT
AAGCAAGGCTACCAACCAATTTTAAGACAATACAAGATTACAACTGCTTCCAGATTGGTAATAGGTTTAGGTGCAGAACA
TCCTCTAGAAACTTCTCTTACAATACACCACATATTTGGAATACCTTATATTCCTGGTACTGCTTTAAAAGGTGTTTGTA
GGATGGTAAGTTTTTGGGATATAGCAATAGAAGAAGCGAGGGGTGAAGAGATAGAAGAAGGGGAAATTGAGAATTTACAA
AAGGAGCTTTATGAAGGTTTGATTTTTGATAGATCTTCTTCTGATAAAGGGAAAGAAGATTCGCCAAAAAGAGTTTTACA
TAAATTGCTTTTTGGTACACAGGATTTTAAAGGATTGCTTCTTTTCCTTGATGCCTTTCCGGTTATCAATAACAATGTTT
CGCTTTTCGATGTGGATATAATAAATGTACATTATAAAAGTTATTACGGCGATGATACAGGGAAAACGGCACCAGGCGAT
TGGGAAAACCCTATTCCTATACCTTTTCTGACCGTGAAGGAGAATACTAGTTTTCAGTTTAGTGTGCTTTTTGACAGAGT
CCGTTTTGAAGAACTCATAAAAGAAAAAATTCCACCGGAAGTGAAAGGGGCAATAGATTTTTTGAACGATTGCACCCGCT
TACAAAAGTTGGTAGAAAACTGGATAAAGAAAGCTCTTACTGAATTTGGTATAGGTGCAAAGACAAGATTAGGATATGGA
TATTTCAAAATCCTCTGA

Upstream 100 bases:

>100_bases
CTACCACAGAAATTTTAGCCCTGGCAAATTGGCTGAAGAGAACGGTTGAAATTGAAATAAAGGAAGAAAAAGATGATTTG
TCTGGGGAGAGGGAAGAACA

Downstream 100 bases:

>100_bases
AATATGCTAAATTATAAATAAAGGTGTCTTGTGTGAAAGGGCATACTAAGCTACTTTCAAACACACCTTTATACGCTGTA
AATTATCTTTTAAAAACATA

Product: hypothetical protein

Products: NA

Alternate protein names: Cmr6 Family CRISPR-Associated RAMP Protein; CRISPR-Associated RAMP Cmr6 Family Protein; Cytoplasmic Protein; CRISPR-Associated Ramp Protein Cmr6 Family; Crispr-Associated Ramp Protein Cmr6 Family

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MIKNFSNLIETVYKNDSEITWEKCENFSLAFSKLIRRELIEGTEGKRKNIFLNSLTRYSIKGIDIVNLFSRVNLQIEDLS
KQGYQPILRQYKITTASRLVIGLGAEHPLETSLTIHHIFGIPYIPGTALKGVCRMVSFWDIAIEEARGEEIEEGEIENLQ
KELYEGLIFDRSSSDKGKEDSPKRVLHKLLFGTQDFKGLLLFLDAFPVINNNVSLFDVDIINVHYKSYYGDDTGKTAPGD
WENPIPIPFLTVKENTSFQFSVLFDRVRFEELIKEKIPPEVKGAIDFLNDCTRLQKLVENWIKKALTEFGIGAKTRLGYG
YFKIL

Sequences:

>Translated_325_residues
MIKNFSNLIETVYKNDSEITWEKCENFSLAFSKLIRRELIEGTEGKRKNIFLNSLTRYSIKGIDIVNLFSRVNLQIEDLS
KQGYQPILRQYKITTASRLVIGLGAEHPLETSLTIHHIFGIPYIPGTALKGVCRMVSFWDIAIEEARGEEIEEGEIENLQ
KELYEGLIFDRSSSDKGKEDSPKRVLHKLLFGTQDFKGLLLFLDAFPVINNNVSLFDVDIINVHYKSYYGDDTGKTAPGD
WENPIPIPFLTVKENTSFQFSVLFDRVRFEELIKEKIPPEVKGAIDFLNDCTRLQKLVENWIKKALTEFGIGAKTRLGYG
YFKIL
>Mature_325_residues
MIKNFSNLIETVYKNDSEITWEKCENFSLAFSKLIRRELIEGTEGKRKNIFLNSLTRYSIKGIDIVNLFSRVNLQIEDLS
KQGYQPILRQYKITTASRLVIGLGAEHPLETSLTIHHIFGIPYIPGTALKGVCRMVSFWDIAIEEARGEEIEEGEIENLQ
KELYEGLIFDRSSSDKGKEDSPKRVLHKLLFGTQDFKGLLLFLDAFPVINNNVSLFDVDIINVHYKSYYGDDTGKTAPGD
WENPIPIPFLTVKENTSFQFSVLFDRVRFEELIKEKIPPEVKGAIDFLNDCTRLQKLVENWIKKALTEFGIGAKTRLGYG
YFKIL

Specific function: Unknown

COG id: COG1604

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37289; Mature: 37289

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNFSNLIETVYKNDSEITWEKCENFSLAFSKLIRRELIEGTEGKRKNIFLNSLTRYSI
CCCCHHHHHHHHHCCCCCEEHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHC
KGIDIVNLFSRVNLQIEDLSKQGYQPILRQYKITTASRLVIGLGAEHPLETSLTIHHIFG
CCCHHHHHHHHCCCEEEHHHHCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEEC
IPYIPGTALKGVCRMVSFWDIAIEEARGEEIEEGEIENLQKELYEGLIFDRSSSDKGKED
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCC
SPKRVLHKLLFGTQDFKGLLLFLDAFPVINNNVSLFDVDIINVHYKSYYGDDTGKTAPGD
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEHHEECCCCCCCCCCC
WENPIPIPFLTVKENTSFQFSVLFDRVRFEELIKEKIPPEVKGAIDFLNDCTRLQKLVEN
CCCCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
WIKKALTEFGIGAKTRLGYGYFKIL
HHHHHHHHHCCCCCCCCCCCEEEEC
>Mature Secondary Structure
MIKNFSNLIETVYKNDSEITWEKCENFSLAFSKLIRRELIEGTEGKRKNIFLNSLTRYSI
CCCCHHHHHHHHHCCCCCEEHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHC
KGIDIVNLFSRVNLQIEDLSKQGYQPILRQYKITTASRLVIGLGAEHPLETSLTIHHIFG
CCCHHHHHHHHCCCEEEHHHHCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEEEEC
IPYIPGTALKGVCRMVSFWDIAIEEARGEEIEEGEIENLQKELYEGLIFDRSSSDKGKED
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCC
SPKRVLHKLLFGTQDFKGLLLFLDAFPVINNNVSLFDVDIINVHYKSYYGDDTGKTAPGD
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEHHEECCCCCCCCCCC
WENPIPIPFLTVKENTSFQFSVLFDRVRFEELIKEKIPPEVKGAIDFLNDCTRLQKLVEN
CCCCCCCCEEEEECCCCEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
WIKKALTEFGIGAKTRLGYGYFKIL
HHHHHHHHHCCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA