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The map label for this gene is 20808952

Identifier: 20808952

GI number: 20808952

Start: 2494897

End: 2495313

Strand: Reverse

Name: 20808952

Synonym: TTE2607

Alternate gene names: NA

Gene position: 2495313-2494897 (Counterclockwise)

Preceding gene: 20808953

Following gene: 20808951

Centisome position: 92.78

GC content: 33.09

Gene sequence:

>417_bases
ATGAGAGCAGTAATTGATACGAATGTATTAATTTCCGGTATTATCAGTAAAAAAAGCTATCCTGCAAAAATAATTAATTA
CTGGATTTTGAATAAATTTGACCCTGTAGTAAGCCCAGAAATTGTAGAAGAATACGCAGAAGTTTTAACAAGGGATAAAT
TTTCTGACCTAGGGACTGTTTCAATGCGCCTTGATTTTTTAAATAAACTCCTTTCTCTTGATTGGGTTTTACTCATTTAT
CCAAAAGAAAGATTTAACATAATAGAGGAAGATCCGAAGGACAATATTTTTCTAGAATGTGCTTTTGAAAGTAGATGCGA
CTTTGTAGTCTCAGGAGACCACCATTTGCTCCAGTTGGAGCAGTATGAGAATATCAAAATAATACCAGCTGAGGAATTTA
TAAATTTGCTCCCATAA

Upstream 100 bases:

>100_bases
AGCTGGAAATCATGCAAATCTTAAATGAATTTAGAGATAAAGCAGAAAAAGCAGGACTGTCTGAAGAGGACGTAGAAAAA
GAGATAAAGGAAGTAAAAAA

Downstream 100 bases:

>100_bases
TGTAGAATTTTTTTAGTTTTTGTAACCATATTGTAATGCTTTTGAAATAAAGCTGTAACATAAGTGGTCTACAATGGAAG
CAGAAGAAAAAACAAAAGAG

Product: nucleic acid-binding protein

Products: NA

Alternate protein names: Pilt Protein Domain Protein; PilT Protein Domain-Containing Protein; PilT Domain-Containing Protein

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MRAVIDTNVLISGIISKKSYPAKIINYWILNKFDPVVSPEIVEEYAEVLTRDKFSDLGTVSMRLDFLNKLLSLDWVLLIY
PKERFNIIEEDPKDNIFLECAFESRCDFVVSGDHHLLQLEQYENIKIIPAEEFINLLP

Sequences:

>Translated_138_residues
MRAVIDTNVLISGIISKKSYPAKIINYWILNKFDPVVSPEIVEEYAEVLTRDKFSDLGTVSMRLDFLNKLLSLDWVLLIY
PKERFNIIEEDPKDNIFLECAFESRCDFVVSGDHHLLQLEQYENIKIIPAEEFINLLP
>Mature_138_residues
MRAVIDTNVLISGIISKKSYPAKIINYWILNKFDPVVSPEIVEEYAEVLTRDKFSDLGTVSMRLDFLNKLLSLDWVLLIY
PKERFNIIEEDPKDNIFLECAFESRCDFVVSGDHHLLQLEQYENIKIIPAEEFINLLP

Specific function: Unknown

COG id: COG1569

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16079; Mature: 16079

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAVIDTNVLISGIISKKSYPAKIINYWILNKFDPVVSPEIVEEYAEVLTRDKFSDLGTV
CCCEECCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHH
SMRLDFLNKLLSLDWVLLIYPKERFNIIEEDPKDNIFLECAFESRCDFVVSGDHHLLQLE
HHHHHHHHHHHHCCEEEEEECHHHCCCCCCCCCCCEEEEEEECCCCCEEEECCCEEEEEE
QYENIKIIPAEEFINLLP
CCCCEEEEEHHHHHHCCC
>Mature Secondary Structure
MRAVIDTNVLISGIISKKSYPAKIINYWILNKFDPVVSPEIVEEYAEVLTRDKFSDLGTV
CCCEECCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCHH
SMRLDFLNKLLSLDWVLLIYPKERFNIIEEDPKDNIFLECAFESRCDFVVSGDHHLLQLE
HHHHHHHHHHHHCCEEEEEECHHHCCCCCCCCCCCEEEEEEECCCCCEEEECCCEEEEEE
QYENIKIIPAEEFINLLP
CCCCEEEEEHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA