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The map label for this gene is yfiM [H]

Identifier: 20808884

GI number: 20808884

Start: 2421468

End: 2422583

Strand: Reverse

Name: yfiM [H]

Synonym: TTE2530

Alternate gene names: 20808884

Gene position: 2422583-2421468 (Counterclockwise)

Preceding gene: 20808885

Following gene: 20808883

Centisome position: 90.08

GC content: 31.0

Gene sequence:

>1116_bases
ATGAGAATCCTTACTATAATGCTTAAAGAAATAAAGGAAATTCTTTATGACAAGAATGTAATGGCAATTATGATACTATT
GCCAATAGTTCTTATTGGAATTTTAGGTTTTGCGTTTTCGTCAACATCAGATATAAAATTAGGGGATATAAAAGTGATAT
ATACAGATGAAGGAGATACGGTACTTTCACAGGGTTTTGATATTTTCATTAAAGAAACTGATAAAATGGGAGTAAAATTT
GTAGAAATAAAAGATATCAGCAAAGGAATAAGTGAAATAGAAAAACGCAAATATGATGGTTATGTTTTTTTAAAAGGTAA
AGATATAACTTTTTATAAGAATGCACATGGAGATATAAAAACGGAGATTGCAGAAAGTATGATTGACTCTTTTGTTGATA
CTTTTAAGGGAATGACAGCTATAGCTTCACAAAATCCTGCCTTTCTTAAGAATAGCGGCGATATAAATTTAAATAGAGAA
TTTATAAATATAACCTCTATTGACAGAAAAGTTAAACAAACATCATTCGATTATTATTCTGTTACAATGCTTACTTTGAT
AATTTTATACGGTGCTATGAGTGGTGTATTTTCAATAGATATGGAAAGGACAAAAAAGACAGGGCGCAGAATATTAGCTT
CTCCTGTTAAGAAATATGAAATATTGATAGGGAAGGTGTTAGGGGTAACTTTTTCTGTTTTTATACAGGCCTTGATTATT
ATTTTTTTTAGCAAATACATCTTCGGAACTAATTGGGGAAATGATATCATAACTGTTTTTGTGATTATAATTAGTGAGAT
AATTTTTGTGGTGGGCTTGGGAGTGAGTTTGGGGTTTATTATAAAAAATGGAGCAATGGCACAAGGTTTACTAAACGGTA
TAATTCCTTTTATAGCCTTTTTAGGTGGGTCATATTATCCTGTAAAAGAGATGGGAAGTCAGTTTATTGAGAGACTTTCA
AATTTTTCTCCAATTACATGGACAAATACAGCCATATTTAACGTGATATGGGTAGGTAATTACCAATATGTACCTACAGC
CCTCATGGTAAATTTAATTCCTGCAGCTTTTTTCATAGTGTTGTCGGCCTACTTATTCAGAAGGGAGGCTTTTTAA

Upstream 100 bases:

>100_bases
AAGAATATACCAATACGCAATCTGAGAAATGAAATTCCCGATTTGGAGACAGTTTTCCTCACGTTAACGGGCAGAAAATT
GAGGGATTAGAGGTGGTAAA

Downstream 100 bases:

>100_bases
GTGAGAGAGCTATTTTTGGTTATGAACAATACTGTAAAGTTATTTTTTAGAAGGAAAGGGAATATTATTTTATTGATTTC
TGGTATTATAATTCCACTTT

Product: ABC-type multidrug transport system, permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MRILTIMLKEIKEILYDKNVMAIMILLPIVLIGILGFAFSSTSDIKLGDIKVIYTDEGDTVLSQGFDIFIKETDKMGVKF
VEIKDISKGISEIEKRKYDGYVFLKGKDITFYKNAHGDIKTEIAESMIDSFVDTFKGMTAIASQNPAFLKNSGDINLNRE
FINITSIDRKVKQTSFDYYSVTMLTLIILYGAMSGVFSIDMERTKKTGRRILASPVKKYEILIGKVLGVTFSVFIQALII
IFFSKYIFGTNWGNDIITVFVIIISEIIFVVGLGVSLGFIIKNGAMAQGLLNGIIPFIAFLGGSYYPVKEMGSQFIERLS
NFSPITWTNTAIFNVIWVGNYQYVPTALMVNLIPAAFFIVLSAYLFRREAF

Sequences:

>Translated_371_residues
MRILTIMLKEIKEILYDKNVMAIMILLPIVLIGILGFAFSSTSDIKLGDIKVIYTDEGDTVLSQGFDIFIKETDKMGVKF
VEIKDISKGISEIEKRKYDGYVFLKGKDITFYKNAHGDIKTEIAESMIDSFVDTFKGMTAIASQNPAFLKNSGDINLNRE
FINITSIDRKVKQTSFDYYSVTMLTLIILYGAMSGVFSIDMERTKKTGRRILASPVKKYEILIGKVLGVTFSVFIQALII
IFFSKYIFGTNWGNDIITVFVIIISEIIFVVGLGVSLGFIIKNGAMAQGLLNGIIPFIAFLGGSYYPVKEMGSQFIERLS
NFSPITWTNTAIFNVIWVGNYQYVPTALMVNLIPAAFFIVLSAYLFRREAF
>Mature_371_residues
MRILTIMLKEIKEILYDKNVMAIMILLPIVLIGILGFAFSSTSDIKLGDIKVIYTDEGDTVLSQGFDIFIKETDKMGVKF
VEIKDISKGISEIEKRKYDGYVFLKGKDITFYKNAHGDIKTEIAESMIDSFVDTFKGMTAIASQNPAFLKNSGDINLNRE
FINITSIDRKVKQTSFDYYSVTMLTLIILYGAMSGVFSIDMERTKKTGRRILASPVKKYEILIGKVLGVTFSVFIQALII
IFFSKYIFGTNWGNDIITVFVIIISEIIFVVGLGVSLGFIIKNGAMAQGLLNGIIPFIAFLGGSYYPVKEMGSQFIERLS
NFSPITWTNTAIFNVIWVGNYQYVPTALMVNLIPAAFFIVLSAYLFRREAF

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 41673; Mature: 41673

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILTIMLKEIKEILYDKNVMAIMILLPIVLIGILGFAFSSTSDIKLGDIKVIYTDEGDT
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEECCCCC
VLSQGFDIFIKETDKMGVKFVEIKDISKGISEIEKRKYDGYVFLKGKDITFYKNAHGDIK
HHHCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCHH
TEIAESMIDSFVDTFKGMTAIASQNPAFLKNSGDINLNREFINITSIDRKVKQTSFDYYS
HHHHHHHHHHHHHHHCCHHHHCCCCCCEEECCCCCEECCEEEEHHHHHHHHHHCCCCHHH
VTMLTLIILYGAMSGVFSIDMERTKKTGRRILASPVKKYEILIGKVLGVTFSVFIQALII
HHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFFSKYIFGTNWGNDIITVFVIIISEIIFVVGLGVSLGFIIKNGAMAQGLLNGIIPFIAF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHH
LGGSYYPVKEMGSQFIERLSNFSPITWTNTAIFNVIWVGNYQYVPTALMVNLIPAAFFIV
HCCCCCCHHHHHHHHHHHHHCCCCCEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
LSAYLFRREAF
HHHHHHHHCCC
>Mature Secondary Structure
MRILTIMLKEIKEILYDKNVMAIMILLPIVLIGILGFAFSSTSDIKLGDIKVIYTDEGDT
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCEEEEEECCCCC
VLSQGFDIFIKETDKMGVKFVEIKDISKGISEIEKRKYDGYVFLKGKDITFYKNAHGDIK
HHHCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCEEEEEECCCCCHH
TEIAESMIDSFVDTFKGMTAIASQNPAFLKNSGDINLNREFINITSIDRKVKQTSFDYYS
HHHHHHHHHHHHHHHCCHHHHCCCCCCEEECCCCCEECCEEEEHHHHHHHHHHCCCCHHH
VTMLTLIILYGAMSGVFSIDMERTKKTGRRILASPVKKYEILIGKVLGVTFSVFIQALII
HHHHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFFSKYIFGTNWGNDIITVFVIIISEIIFVVGLGVSLGFIIKNGAMAQGLLNGIIPFIAF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHH
LGGSYYPVKEMGSQFIERLSNFSPITWTNTAIFNVIWVGNYQYVPTALMVNLIPAAFFIV
HCCCCCCHHHHHHHHHHHHHCCCCCEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH
LSAYLFRREAF
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]