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The map label for this gene is MarR2 [H]

Identifier: 20808869

GI number: 20808869

Start: 2403920

End: 2404420

Strand: Reverse

Name: MarR2 [H]

Synonym: TTE2515

Alternate gene names: 20808869

Gene position: 2404420-2403920 (Counterclockwise)

Preceding gene: 20808870

Following gene: 20808868

Centisome position: 89.4

GC content: 34.53

Gene sequence:

>501_bases
GTGTCAAAAATATTTGCATACGAAATATTCGTATACGAAATAATTTTAAATGCGGTGGTGAAAATGGAAGAGATAAGCAA
TGGTTTGAAAATATTAAAGCTTTTAAAACAAATAGGTAACACAATAAAGCAGATGATGAAATACGAATGCAAGGAGTATG
ACATAACAGGCCCTCAGGGAATGCTCATGGGGATTTTAGCCCATTATGGAGAGATGAAAGTGAGCGATTTAAGTCAAAAA
TTGGGGCTTTCTAACAGCACTGTTTCTGGCATTCTTGACAGACTTGAAAAACAAGGGTTGGTTAAAAGGGTGAGAAGCAA
AGAAGACAGAAGAGTAGTTTATGTCAGTGTTACTCCAGAATTTAAGGAAAAGTTTCAAAGGCATTTTAAAGAAGCGGAAA
GAAAATTTGAAGAGTTGATAAATAGAGCTAGTCAAGAGGACCTTAATAAGATAATAGAGGGACTAGAAGCGTTAAAAAAA
GTGTTAGAAATGAAAGGTTAA

Upstream 100 bases:

>100_bases
ACAGTTTTAGACTGTCTTAGTTTTAAGGCAGTCTTTATTTTTTTATGAAAAGCTTTAGAGAATATTGACATACTAGATTG
GGAGGAGTAAAATATATTTT

Downstream 100 bases:

>100_bases
TGAGGATTTAAAAAGATGATGGAAATAAAGAAGGAAAAGATTACAAGATAACTAAATGTAGCAAAAATTTAAGGAGGAGA
AGGTGACTATATGACAAAGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MSKIFAYEIFVYEIILNAVVKMEEISNGLKILKLLKQIGNTIKQMMKYECKEYDITGPQGMLMGILAHYGEMKVSDLSQK
LGLSNSTVSGILDRLEKQGLVKRVRSKEDRRVVYVSVTPEFKEKFQRHFKEAERKFEELINRASQEDLNKIIEGLEALKK
VLEMKG

Sequences:

>Translated_166_residues
MSKIFAYEIFVYEIILNAVVKMEEISNGLKILKLLKQIGNTIKQMMKYECKEYDITGPQGMLMGILAHYGEMKVSDLSQK
LGLSNSTVSGILDRLEKQGLVKRVRSKEDRRVVYVSVTPEFKEKFQRHFKEAERKFEELINRASQEDLNKIIEGLEALKK
VLEMKG
>Mature_165_residues
SKIFAYEIFVYEIILNAVVKMEEISNGLKILKLLKQIGNTIKQMMKYECKEYDITGPQGMLMGILAHYGEMKVSDLSQKL
GLSNSTVSGILDRLEKQGLVKRVRSKEDRRVVYVSVTPEFKEKFQRHFKEAERKFEELINRASQEDLNKIIEGLEALKKV
LEMKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 19193; Mature: 19062

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIFAYEIFVYEIILNAVVKMEEISNGLKILKLLKQIGNTIKQMMKYECKEYDITGPQG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
MLMGILAHYGEMKVSDLSQKLGLSNSTVSGILDRLEKQGLVKRVRSKEDRRVVYVSVTPE
HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHH
FKEKFQRHFKEAERKFEELINRASQEDLNKIIEGLEALKKVLEMKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKIFAYEIFVYEIILNAVVKMEEISNGLKILKLLKQIGNTIKQMMKYECKEYDITGPQG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
MLMGILAHYGEMKVSDLSQKLGLSNSTVSGILDRLEKQGLVKRVRSKEDRRVVYVSVTPE
HHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHH
FKEKFQRHFKEAERKFEELINRASQEDLNKIIEGLEALKKVLEMKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]