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The map label for this gene is PgpB2 [C]

Identifier: 20808865

GI number: 20808865

Start: 2398180

End: 2398716

Strand: Reverse

Name: PgpB2 [C]

Synonym: TTE2511

Alternate gene names: 20808865

Gene position: 2398716-2398180 (Counterclockwise)

Preceding gene: 20808866

Following gene: 20808863

Centisome position: 89.19

GC content: 36.13

Gene sequence:

>537_bases
ATGGAATTAAGAAAAATACTGCAGGACAAGGACAGAAATATATTTTTCTACATCAATGAGAGGATAAAATGCAGCCTCTT
GGATAAAATAATGCCCAAAATAACTCATGCGGGTGGCCCTGTTTTCACCGTGTTTGTGACAGTATTTTTGGCCCTTTTTG
GTAAAAATAATGTCAAAACGTCTGCGATAGAGGCTTTGTTTTCCCTTATAAGTAGTCATCTTTTTGTGCAACTGTTGAAG
AGAAAATACACAAGGCCTCGCCCTTATATGGTGCTTGCAAATGCTAACACTTTTCGTCAATTATTAAAAGATTATTCTTT
TCCTTCTGGACATGCGACTGCCAGTTTTTCTCTCGCAATGACTTTTTCAATATTCTTTCCCAACCTTGCAATTATCTTTG
TTTCTCTTGCAGTACTTGTTGGACTTTCTAGAATATACATGGGGCTTCACTATCCTTCCGATGTTTTAATGGGTTCTACA
ATAGGCATTGCTTTTGCTTATCTTACTCATTTTATGAGTGTAAGAATTTTTGTGTAA

Upstream 100 bases:

>100_bases
AAATCAACATGGAGGAATTTGAGGGTGAGCTCATAAGAGAGACATTTTATAAAAATTATGATAAGATAGAAATGAAGACT
TTTAAAGAGGTGGCCTGTCA

Downstream 100 bases:

>100_bases
AAATTTTTGAAAATAAGTTGACATTGTGCAAGAAGAAGAATATAATGTAAAAGGGCGTGAAAATTTAATACCTCGTTAGG
TGAGGCTCCTATACAGATAC

Product: membrane-associated phospholipid phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MELRKILQDKDRNIFFYINERIKCSLLDKIMPKITHAGGPVFTVFVTVFLALFGKNNVKTSAIEALFSLISSHLFVQLLK
RKYTRPRPYMVLANANTFRQLLKDYSFPSGHATASFSLAMTFSIFFPNLAIIFVSLAVLVGLSRIYMGLHYPSDVLMGST
IGIAFAYLTHFMSVRIFV

Sequences:

>Translated_178_residues
MELRKILQDKDRNIFFYINERIKCSLLDKIMPKITHAGGPVFTVFVTVFLALFGKNNVKTSAIEALFSLISSHLFVQLLK
RKYTRPRPYMVLANANTFRQLLKDYSFPSGHATASFSLAMTFSIFFPNLAIIFVSLAVLVGLSRIYMGLHYPSDVLMGST
IGIAFAYLTHFMSVRIFV
>Mature_178_residues
MELRKILQDKDRNIFFYINERIKCSLLDKIMPKITHAGGPVFTVFVTVFLALFGKNNVKTSAIEALFSLISSHLFVQLLK
RKYTRPRPYMVLANANTFRQLLKDYSFPSGHATASFSLAMTFSIFFPNLAIIFVSLAVLVGLSRIYMGLHYPSDVLMGST
IGIAFAYLTHFMSVRIFV

Specific function: Unknown

COG id: COG0671

COG function: function code I; Membrane-associated phospholipid phosphatase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016118
- InterPro:   IPR000326
- InterPro:   IPR015414 [H]

Pfam domain/function: PF01569 PAP2; PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 20203; Mature: 20203

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELRKILQDKDRNIFFYINERIKCSLLDKIMPKITHAGGPVFTVFVTVFLALFGKNNVKT
CCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH
SAIEALFSLISSHLFVQLLKRKYTRPRPYMVLANANTFRQLLKDYSFPSGHATASFSLAM
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHH
TFSIFFPNLAIIFVSLAVLVGLSRIYMGLHYPSDVLMGSTIGIAFAYLTHFMSVRIFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELRKILQDKDRNIFFYINERIKCSLLDKIMPKITHAGGPVFTVFVTVFLALFGKNNVKT
CCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHH
SAIEALFSLISSHLFVQLLKRKYTRPRPYMVLANANTFRQLLKDYSFPSGHATASFSLAM
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHH
TFSIFFPNLAIIFVSLAVLVGLSRIYMGLHYPSDVLMGSTIGIAFAYLTHFMSVRIFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]