Click here to switch to the map view.

The map label for this gene is 20808724

Identifier: 20808724

GI number: 20808724

Start: 2252988

End: 2253788

Strand: Direct

Name: 20808724

Synonym: TTE2360

Alternate gene names: NA

Gene position: 2252988-2253788 (Clockwise)

Preceding gene: 20808723

Following gene: 20808728

Centisome position: 83.77

GC content: 30.59

Gene sequence:

>801_bases
ATGCCTAAACAGGAAACTCTTGATTTGATGTCTGTCATCTTTAAAAGAGACTTAAATGAGCTTTTGTTAAAGTACAGACT
TAAAGATTACTCTTCTTTTTATAAAATAAAAACTTCTATTGAAGATAAGCTTGAAGGCGGAGAATTTGAAGATTTGAAAA
AGGACCTCAAAGAACTTAAAAAAATAATTGATGAAGGGAAAATGAGCCTTTATTACATTCGATTATTGAAGCAACTTCTC
TTGTTAGTGGAGTCTGTTATTGAAAAAACTGTAAATAATGATTATGAAAAGGCTTTAGAAAAATTGATTGAAGCCATGAA
ACTCACTATACCAGATTTTTCTCTTTCTAACTATACCCGCTTTGTGTACAGCAGTATGGAAGTTAGAATTTTAATGAATA
TCGCCCTTATACTAAGAGAAAAAGAATCATACGAAAAATGTATAGAAATACTTCTTTTCTGCTTAGAAGCACTGGAGCCA
GACAATGTAGAAGAAAGAATTAGGGTATATTATAACCTTTCCTATGCGTATCACCTATCTTCCATATATGATAAGGCGCT
TTATTACGCAGAAGAAGGTATTAAAACTTGTATAGATAACAAGACTTTAAATGGGTTGGCACTTTTATACTTCAGAAAGG
GAATTGCCGAATTTAAGCTTAATAGAGAAAACTACATAGATTCTCTTTTAAAGGCTGTAAATCTTTCAGAAATATGTGGG
CATGAAAAGTTAAGGAAAATGGTCATAGAAAATTGCAAGAAAATTTATAATATAGACCTGGAAAATTTTCAAAAGCTTTA
A

Upstream 100 bases:

>100_bases
GAGAGATATACGTAAATCTTTAAGGCTTACTCAAAAAGATGTAGCAGATCAAACTCTTGTAAGCACAGATACTCTAAGGA
GAATTGAAAATGGAAAGGTT

Downstream 100 bases:

>100_bases
TATAAAAAAACAGCAGAGAGTAAAATGTTAGCATTCTACTCCTTGCTGACTATAAAATCATCGGTTCTGCCGCTCTTTAA
CTCCCCTCAATTATTTGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: Helix-Turn-Helix; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MPKQETLDLMSVIFKRDLNELLLKYRLKDYSSFYKIKTSIEDKLEGGEFEDLKKDLKELKKIIDEGKMSLYYIRLLKQLL
LLVESVIEKTVNNDYEKALEKLIEAMKLTIPDFSLSNYTRFVYSSMEVRILMNIALILREKESYEKCIEILLFCLEALEP
DNVEERIRVYYNLSYAYHLSSIYDKALYYAEEGIKTCIDNKTLNGLALLYFRKGIAEFKLNRENYIDSLLKAVNLSEICG
HEKLRKMVIENCKKIYNIDLENFQKL

Sequences:

>Translated_266_residues
MPKQETLDLMSVIFKRDLNELLLKYRLKDYSSFYKIKTSIEDKLEGGEFEDLKKDLKELKKIIDEGKMSLYYIRLLKQLL
LLVESVIEKTVNNDYEKALEKLIEAMKLTIPDFSLSNYTRFVYSSMEVRILMNIALILREKESYEKCIEILLFCLEALEP
DNVEERIRVYYNLSYAYHLSSIYDKALYYAEEGIKTCIDNKTLNGLALLYFRKGIAEFKLNRENYIDSLLKAVNLSEICG
HEKLRKMVIENCKKIYNIDLENFQKL
>Mature_265_residues
PKQETLDLMSVIFKRDLNELLLKYRLKDYSSFYKIKTSIEDKLEGGEFEDLKKDLKELKKIIDEGKMSLYYIRLLKQLLL
LVESVIEKTVNNDYEKALEKLIEAMKLTIPDFSLSNYTRFVYSSMEVRILMNIALILREKESYEKCIEILLFCLEALEPD
NVEERIRVYYNLSYAYHLSSIYDKALYYAEEGIKTCIDNKTLNGLALLYFRKGIAEFKLNRENYIDSLLKAVNLSEICGH
EKLRKMVIENCKKIYNIDLENFQKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31499; Mature: 31368

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKQETLDLMSVIFKRDLNELLLKYRLKDYSSFYKIKTSIEDKLEGGEFEDLKKDLKELK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KIIDEGKMSLYYIRLLKQLLLLVESVIEKTVNNDYEKALEKLIEAMKLTIPDFSLSNYTR
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
FVYSSMEVRILMNIALILREKESYEKCIEILLFCLEALEPDNVEERIRVYYNLSYAYHLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SIYDKALYYAEEGIKTCIDNKTLNGLALLYFRKGIAEFKLNRENYIDSLLKAVNLSEICG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHC
HEKLRKMVIENCKKIYNIDLENFQKL
HHHHHHHHHHHHHHHHCCCHHHHHCC
>Mature Secondary Structure 
PKQETLDLMSVIFKRDLNELLLKYRLKDYSSFYKIKTSIEDKLEGGEFEDLKKDLKELK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KIIDEGKMSLYYIRLLKQLLLLVESVIEKTVNNDYEKALEKLIEAMKLTIPDFSLSNYTR
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
FVYSSMEVRILMNIALILREKESYEKCIEILLFCLEALEPDNVEERIRVYYNLSYAYHLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SIYDKALYYAEEGIKTCIDNKTLNGLALLYFRKGIAEFKLNRENYIDSLLKAVNLSEICG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCHHHHHC
HEKLRKMVIENCKKIYNIDLENFQKL
HHHHHHHHHHHHHHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA