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The map label for this gene is 20808715

Identifier: 20808715

GI number: 20808715

Start: 2236177

End: 2238087

Strand: Direct

Name: 20808715

Synonym: TTE2349

Alternate gene names: NA

Gene position: 2236177-2238087 (Clockwise)

Preceding gene: 20808714

Following gene: 20808723

Centisome position: 83.15

GC content: 34.33

Gene sequence:

>1911_bases
ATGATAAGTAAGATTAAAATTGCTTTATTACTTTTATTGATTATAGCATTTTTGTTCCCCTCACTTTATATCAGACCAGT
AAATGCTTCAAATGACCCCGTTAAAGTATGGTTTTCTTCTGAATATAAACCAAAAGACCATGGTTGGTACACAAATAATT
GGGAAAGCAATATTACTTTTAAGCTATCCCCTCAACCAGATTTATTCTTTACATCCCCCGATGAAGAGTTACTACCAACT
ATTACTGTAATCCCTAGCATCCAATATCAAACTATTGAAGGAATAGGGACATCTTTAGAAGAATCTACTATATTTAACCT
TTCAAAAATGTCAAGTGAAGTCCGTAGCACAGTTTTAAGAGAATTATTTGATCGTCAAAATGGAATTGGACTTAGTTTAA
TTAGAATTTGCTTCGGCAGCTCTGATTTTACAGCAAGAGATTTTTACACTTATGATGACCTGCCAAAAGGTAACACCGAC
TCTGAATTACAATATTTTACAATTCAAAAGGATAAGGACTACAATATTATTAGCACTTTGCAAGGGATTTTACAAATCGA
TAATAATATAAAAGTATTCGCATCTCCTTGGTCACCACCTGCATGGATGAAAAGTCCTGAAACCTTAATAGGAGGGAGAT
TAAAGTCTGAATGGATACCTACATTAGCAAAATATTACAGGAAAGCAATTCAAGCATATCAACAAGAAGGTATACCAATA
TATGCTATGACGTTGCAAAACGAACCTTTATATGAACCACCCGATTATCCAGGATGTTTCGTTTCTCCTGAACAAGAAAG
AGATCTAGCCAAAGCACTAAGTAGAGAATTAAAAAATAACCAGTTGAAAACAAAGTTATGGATTTATGATCACACTTTCT
TCGATTGGTATGCATATATCACTCGTTGGGGACTTAATGCATGGAGCTATGTAAACACAGTCTTTTCTGACCCCGAAGCT
TACCAAGCTGTCGATGGCGTGGCTTTTCACGACTACGGTGGGGAACCTTCTGAGATGACTCGAATAAGAAATACTTACCC
AGAAAAGGGAATGTACTTTACAGAAAGGTCTGTATGGGGTATAGAAGGAGCAGCTAGAATAATTCAATATTTTAGAAATT
GGGCAAAAACTTATGTCGCATGGGTCACGATGTTAGACAGCAATAAACAACCCGAAAAATGGACTTTTGCTCCTGATCCC
ACTATATTAATTCAAAACGCTCAAAATCCTGATTATTATTGGCACACACCTGAATACTATTTATTAGGTCAATTTTCAAA
ATTTATCCTTCCCGGTGCAAAAAGAATTTATACCAATAGCGGTAATCCAGACGCTTTAAGTAATGTAGCTTTTCTAAACC
CAGATAATACTATTGTGGTTGTAGTCGTAAATGCCACTAACTCAACCCAAAAATTTCGCATATTAACATCTATGGGGCAA
ATAAAAACTATAATACCAGCAAAGACTGTTGCAACTTATAAATGGAAATATGAGCCTACGATAAAAGATATAATATCCTT
AAGGTCCAGAGCAAATAATCTTTTTGTATCAGTTGAAGCCTCAGAAAACTATTACTTAAAAGCTTCTCAATCACAAATTA
CTTTAAATACTAAATTCGAAGTTATACCTTTGGATAATGGTAGAATTGCTTTGAAATCTATAGTAAATAATAAATTTGTT
TCTGCAGAAAATGCCGGTTCATTACCTTTAGTTGCAAACAGAGAATCTATAGGAAATTGGGAAATATTTGATGTTGAGAT
ACTGGAAAGAGAAAATGATATAGCACTTAAATCATTAGCAAACAACAAATACGTATGCGCTGAAAACGCTGGCAAAGATC
CATTAATTGCAAATAGAGACAAAGTAAAAGGTGCATGGGAAGCTTTTGAGTTAATATTAGCAAATCGCTGA

Upstream 100 bases:

>100_bases
GATATAGGCGGTGACCTTTATAATGCACCCTCTATTAAAAAGTCTATTGAAACTTTTGTAATTAATTAAAAGAAAGTTAA
AATCAAGCGAGGTGAAAGGG

Downstream 100 bases:

>100_bases
TAACTCTATAACAACGCACCAATCTAGAAAATATTTTCTAGATTGGTGCGTATTTTTAAAATAGTTTTTCTTAGCTTTTC
CTGTTTTATTTTAACACTCT

Product: O-glycosyl hydrolase family protein

Products: NA

Alternate protein names: Glucan Endo-1 6-Beta-Glucosidase; Glycoside Hydrolase Family; O-Glycosyl Hydrolase Family; Glycoside Hydrolase Family Protein; O-Glycosyl Hydrolase; Glycosyl Hydrolase; Ricin B Lectin; Glycoside Hydrolase; O-Glycosyl Hydrolase Family Protein; Xylan 1 4-Beta-Xylosidase; Lysosomal Glucosyl Ceramidase-Like Protein; Glycosy Hydrolase Family Protein; Glucan EndO-1 6-Beta-Glucosidase; Protease-Like Protein; Helix-Turn-Helix AraC Type; Pkd Domain Containing Protein; Metallophosphoesterase; Glycosyl Hydrolase Family; Glycoside Hydrolase Family 3 Domain Protein; Coagulation Factor 5/8 Type Domain-Containing Protein; LPXTG-Motif Cell Wall Anchor Domain Protein; Glycosyl Hydrolases Family; Lipolytic Protein G-D-S-L Family; Endo-1 6-Beta-D-Glucanase; Peptidase S8 And; Glucuronoarabinoxylan Endo-1 4-Beta-Xylanase; Serine Protease

Number of amino acids: Translated: 636; Mature: 636

Protein sequence:

>636_residues
MISKIKIALLLLLIIAFLFPSLYIRPVNASNDPVKVWFSSEYKPKDHGWYTNNWESNITFKLSPQPDLFFTSPDEELLPT
ITVIPSIQYQTIEGIGTSLEESTIFNLSKMSSEVRSTVLRELFDRQNGIGLSLIRICFGSSDFTARDFYTYDDLPKGNTD
SELQYFTIQKDKDYNIISTLQGILQIDNNIKVFASPWSPPAWMKSPETLIGGRLKSEWIPTLAKYYRKAIQAYQQEGIPI
YAMTLQNEPLYEPPDYPGCFVSPEQERDLAKALSRELKNNQLKTKLWIYDHTFFDWYAYITRWGLNAWSYVNTVFSDPEA
YQAVDGVAFHDYGGEPSEMTRIRNTYPEKGMYFTERSVWGIEGAARIIQYFRNWAKTYVAWVTMLDSNKQPEKWTFAPDP
TILIQNAQNPDYYWHTPEYYLLGQFSKFILPGAKRIYTNSGNPDALSNVAFLNPDNTIVVVVVNATNSTQKFRILTSMGQ
IKTIIPAKTVATYKWKYEPTIKDIISLRSRANNLFVSVEASENYYLKASQSQITLNTKFEVIPLDNGRIALKSIVNNKFV
SAENAGSLPLVANRESIGNWEIFDVEILERENDIALKSLANNKYVCAENAGKDPLIANRDKVKGAWEAFELILANR

Sequences:

>Translated_636_residues
MISKIKIALLLLLIIAFLFPSLYIRPVNASNDPVKVWFSSEYKPKDHGWYTNNWESNITFKLSPQPDLFFTSPDEELLPT
ITVIPSIQYQTIEGIGTSLEESTIFNLSKMSSEVRSTVLRELFDRQNGIGLSLIRICFGSSDFTARDFYTYDDLPKGNTD
SELQYFTIQKDKDYNIISTLQGILQIDNNIKVFASPWSPPAWMKSPETLIGGRLKSEWIPTLAKYYRKAIQAYQQEGIPI
YAMTLQNEPLYEPPDYPGCFVSPEQERDLAKALSRELKNNQLKTKLWIYDHTFFDWYAYITRWGLNAWSYVNTVFSDPEA
YQAVDGVAFHDYGGEPSEMTRIRNTYPEKGMYFTERSVWGIEGAARIIQYFRNWAKTYVAWVTMLDSNKQPEKWTFAPDP
TILIQNAQNPDYYWHTPEYYLLGQFSKFILPGAKRIYTNSGNPDALSNVAFLNPDNTIVVVVVNATNSTQKFRILTSMGQ
IKTIIPAKTVATYKWKYEPTIKDIISLRSRANNLFVSVEASENYYLKASQSQITLNTKFEVIPLDNGRIALKSIVNNKFV
SAENAGSLPLVANRESIGNWEIFDVEILERENDIALKSLANNKYVCAENAGKDPLIANRDKVKGAWEAFELILANR
>Mature_636_residues
MISKIKIALLLLLIIAFLFPSLYIRPVNASNDPVKVWFSSEYKPKDHGWYTNNWESNITFKLSPQPDLFFTSPDEELLPT
ITVIPSIQYQTIEGIGTSLEESTIFNLSKMSSEVRSTVLRELFDRQNGIGLSLIRICFGSSDFTARDFYTYDDLPKGNTD
SELQYFTIQKDKDYNIISTLQGILQIDNNIKVFASPWSPPAWMKSPETLIGGRLKSEWIPTLAKYYRKAIQAYQQEGIPI
YAMTLQNEPLYEPPDYPGCFVSPEQERDLAKALSRELKNNQLKTKLWIYDHTFFDWYAYITRWGLNAWSYVNTVFSDPEA
YQAVDGVAFHDYGGEPSEMTRIRNTYPEKGMYFTERSVWGIEGAARIIQYFRNWAKTYVAWVTMLDSNKQPEKWTFAPDP
TILIQNAQNPDYYWHTPEYYLLGQFSKFILPGAKRIYTNSGNPDALSNVAFLNPDNTIVVVVVNATNSTQKFRILTSMGQ
IKTIIPAKTVATYKWKYEPTIKDIISLRSRANNLFVSVEASENYYLKASQSQITLNTKFEVIPLDNGRIALKSIVNNKFV
SAENAGSLPLVANRESIGNWEIFDVEILERENDIALKSLANNKYVCAENAGKDPLIANRDKVKGAWEAFELILANR

Specific function: Unknown

COG id: COG5520

COG function: function code M; O-Glycosyl hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI284807150, Length=451, Percent_Identity=26.6075388026608, Blast_Score=141, Evalue=2e-33,
Organism=Homo sapiens, GI54607043, Length=449, Percent_Identity=26.2806236080178, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI54607045, Length=449, Percent_Identity=26.2806236080178, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI54607047, Length=449, Percent_Identity=26.2806236080178, Blast_Score=140, Evalue=3e-33,
Organism=Homo sapiens, GI284807152, Length=403, Percent_Identity=27.0471464019851, Blast_Score=121, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17539758, Length=456, Percent_Identity=27.4122807017544, Blast_Score=136, Evalue=3e-32,
Organism=Caenorhabditis elegans, GI193204210, Length=419, Percent_Identity=28.4009546539379, Blast_Score=135, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI17539756, Length=457, Percent_Identity=27.1334792122538, Blast_Score=133, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI17542884, Length=406, Percent_Identity=26.8472906403941, Blast_Score=127, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI115532470, Length=421, Percent_Identity=25.1781472684086, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI115532472, Length=421, Percent_Identity=25.1781472684086, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI25151335, Length=388, Percent_Identity=27.0618556701031, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI21355305, Length=448, Percent_Identity=23.4375, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI161078544, Length=446, Percent_Identity=25.3363228699552, Blast_Score=99, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72834; Mature: 72834

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISKIKIALLLLLIIAFLFPSLYIRPVNASNDPVKVWFSSEYKPKDHGWYTNNWESNITF
CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEE
KLSPQPDLFFTSPDEELLPTITVIPSIQYQTIEGIGTSLEESTIFNLSKMSSEVRSTVLR
EECCCCCEEEECCCHHHCCEEEEECCCCEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
ELFDRQNGIGLSLIRICFGSSDFTARDFYTYDDLPKGNTDSELQYFTIQKDKDYNIISTL
HHHHCCCCCCCEEHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHH
QGILQIDNNIKVFASPWSPPAWMKSPETLIGGRLKSEWIPTLAKYYRKAIQAYQQEGIPI
HHHHEECCCEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE
YAMTLQNEPLYEPPDYPGCFVSPEQERDLAKALSRELKNNQLKTKLWIYDHTFFDWYAYI
EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHH
TRWGLNAWSYVNTVFSDPEAYQAVDGVAFHDYGGEPSEMTRIRNTYPEKGMYFTERSVWG
HHHCCCHHHHHHHHHCCCHHHHHHCCEEEECCCCCHHHHHHHHHCCCCCCEEEECCCCCC
IEGAARIIQYFRNWAKTYVAWVTMLDSNKQPEKWTFAPDPTILIQNAQNPDYYWHTPEYY
CHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEECCCCCEEEEECCCCCCCEEECCCEE
LLGQFSKFILPGAKRIYTNSGNPDALSNVAFLNPDNTIVVVVVNATNSTQKFRILTSMGQ
EEECHHHHHCCCCCEEEECCCCCHHHCCEEEECCCCEEEEEEEECCCCCCEEEEEECCCC
IKTIIPAKTVATYKWKYEPTIKDIISLRSRANNLFVSVEASENYYLKASQSQITLNTKFE
EEEECCCCEEEEEEEEECCHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCEEEEECEEE
VIPLDNGRIALKSIVNNKFVSAENAGSLPLVANRESIGNWEIFDVEILERENDIALKSLA
EEECCCCCEEHHHHHCCCEECCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCEEHHHHC
NNKYVCAENAGKDPLIANRDKVKGAWEAFELILANR
CCCEEEECCCCCCCCCCCCHHCCHHHHHHHHHHCCC
>Mature Secondary Structure
MISKIKIALLLLLIIAFLFPSLYIRPVNASNDPVKVWFSSEYKPKDHGWYTNNWESNITF
CCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEE
KLSPQPDLFFTSPDEELLPTITVIPSIQYQTIEGIGTSLEESTIFNLSKMSSEVRSTVLR
EECCCCCEEEECCCHHHCCEEEEECCCCEEEHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
ELFDRQNGIGLSLIRICFGSSDFTARDFYTYDDLPKGNTDSELQYFTIQKDKDYNIISTL
HHHHCCCCCCCEEHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHH
QGILQIDNNIKVFASPWSPPAWMKSPETLIGGRLKSEWIPTLAKYYRKAIQAYQQEGIPI
HHHHEECCCEEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE
YAMTLQNEPLYEPPDYPGCFVSPEQERDLAKALSRELKNNQLKTKLWIYDHTFFDWYAYI
EEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHHHHHH
TRWGLNAWSYVNTVFSDPEAYQAVDGVAFHDYGGEPSEMTRIRNTYPEKGMYFTERSVWG
HHHCCCHHHHHHHHHCCCHHHHHHCCEEEECCCCCHHHHHHHHHCCCCCCEEEECCCCCC
IEGAARIIQYFRNWAKTYVAWVTMLDSNKQPEKWTFAPDPTILIQNAQNPDYYWHTPEYY
CHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEECCCCCEEEEECCCCCCCEEECCCEE
LLGQFSKFILPGAKRIYTNSGNPDALSNVAFLNPDNTIVVVVVNATNSTQKFRILTSMGQ
EEECHHHHHCCCCCEEEECCCCCHHHCCEEEECCCCEEEEEEEECCCCCCEEEEEECCCC
IKTIIPAKTVATYKWKYEPTIKDIISLRSRANNLFVSVEASENYYLKASQSQITLNTKFE
EEEECCCCEEEEEEEEECCHHHHHHHHHHCCCEEEEEEECCCCEEEEECCCEEEEECEEE
VIPLDNGRIALKSIVNNKFVSAENAGSLPLVANRESIGNWEIFDVEILERENDIALKSLA
EEECCCCCEEHHHHHCCCEECCCCCCCCCEEECCCCCCCEEEEEEEEEECCCCEEHHHHC
NNKYVCAENAGKDPLIANRDKVKGAWEAFELILANR
CCCEEEECCCCCCCCCCCCHHCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA