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The map label for this gene is MalF5 [H]

Identifier: 20808712

GI number: 20808712

Start: 2233046

End: 2233933

Strand: Direct

Name: MalF5 [H]

Synonym: TTE2346

Alternate gene names: 20808712

Gene position: 2233046-2233933 (Clockwise)

Preceding gene: 20808711

Following gene: 20808713

Centisome position: 83.03

GC content: 37.39

Gene sequence:

>888_bases
ATGCACAAAGTTTTAACTGATAAAAAGACTATTCTACTTCTCACTCTGCCCGGACTATTCGTATACACATTTGCAATTTT
AGCCCCAATATTTTTAAGTGTGTATATAGGCATGACTGACTGGTCAGGTATAGACAAGCCAGTATTCATTGGCCTTAAAA
ACTTTAAAACTATACTGTTTTCTGACATGACTTTCTGGAAATCCCTGTACCACGCTTTGCTCCTCGCCCTATCATACCTA
TTTATCCAGCATCCAATAGCATTAACCTTTGCAATACTTATAGATAAAATAGGAGGAAGGGCAGAAAAAATATTTCGCAC
AATCTTTTTTATTCCTGCCATAATACCTATAATTGTCACTTCCCGCATGTGGGTAAGCCTCTATGACCCTCAATACGGTT
TAATAAACAAGGCTTTAGACCTTTTTCATCTAGGCTTTTTAAAACAGCAGTGGCTGGGAGACCCAAAGACAGTCTTAGCC
TCATTAATTGTGATTATGATGTGGCAGGGATTTGGATGGGCTCTTTTGATATATTACGCAGGCTTAAAAGGCATTCCAGA
AGAGCTATATGAAGCGGCAAGAATTGACGGAGCGACAGGTTTTAACCTATACACAAAAATAACCTTACCCCTTTTAAAAC
CCGTCATTAAAGTAAACTTCACAATTGCCATAATATACGCATTAAAACAAATGGAAACAGTTTACTTAACAACTAACGGC
GGACCAGGCGATGCAAGCCAGTTTATTGCAAACTACCTCTATATAAAGGCTTTCAGCTCGTATCAGTACGGCTATGCCAA
TGCAATTTCTGTATTGTTTGTGATAATAACTCTGCTTATAAACATCCTATTCCTAAAAGTATTTAAGGCAGAAAACTATG
AATATTAG

Upstream 100 bases:

>100_bases
TTATCAAAACTTGAAGAGCTGGCAAAAGCTGAAATACAGTAAAATATGCCTACTTCCGGGGCAACCCGGAAGTAGGTAAA
TTCATCAAAGAGGTGACAAC

Downstream 100 bases:

>100_bases
CTGGGAGGTAAAAAACGTGCAAAAAAAACAGTCAATTTTTCACAACAGCAGAATAATACTACTTCTAATTTTAATAATCT
TTTCCATAGGCCAGCTTTTC

Product: ABC-type sugar transport systems, permease components

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MHKVLTDKKTILLLTLPGLFVYTFAILAPIFLSVYIGMTDWSGIDKPVFIGLKNFKTILFSDMTFWKSLYHALLLALSYL
FIQHPIALTFAILIDKIGGRAEKIFRTIFFIPAIIPIIVTSRMWVSLYDPQYGLINKALDLFHLGFLKQQWLGDPKTVLA
SLIVIMMWQGFGWALLIYYAGLKGIPEELYEAARIDGATGFNLYTKITLPLLKPVIKVNFTIAIIYALKQMETVYLTTNG
GPGDASQFIANYLYIKAFSSYQYGYANAISVLFVIITLLINILFLKVFKAENYEY

Sequences:

>Translated_295_residues
MHKVLTDKKTILLLTLPGLFVYTFAILAPIFLSVYIGMTDWSGIDKPVFIGLKNFKTILFSDMTFWKSLYHALLLALSYL
FIQHPIALTFAILIDKIGGRAEKIFRTIFFIPAIIPIIVTSRMWVSLYDPQYGLINKALDLFHLGFLKQQWLGDPKTVLA
SLIVIMMWQGFGWALLIYYAGLKGIPEELYEAARIDGATGFNLYTKITLPLLKPVIKVNFTIAIIYALKQMETVYLTTNG
GPGDASQFIANYLYIKAFSSYQYGYANAISVLFVIITLLINILFLKVFKAENYEY
>Mature_295_residues
MHKVLTDKKTILLLTLPGLFVYTFAILAPIFLSVYIGMTDWSGIDKPVFIGLKNFKTILFSDMTFWKSLYHALLLALSYL
FIQHPIALTFAILIDKIGGRAEKIFRTIFFIPAIIPIIVTSRMWVSLYDPQYGLINKALDLFHLGFLKQQWLGDPKTVLA
SLIVIMMWQGFGWALLIYYAGLKGIPEELYEAARIDGATGFNLYTKITLPLLKPVIKVNFTIAIIYALKQMETVYLTTNG
GPGDASQFIANYLYIKAFSSYQYGYANAISVLFVIITLLINILFLKVFKAENYEY

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=238, Percent_Identity=30.672268907563, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1790465, Length=259, Percent_Identity=28.1853281853282, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1789861, Length=250, Percent_Identity=27.6, Blast_Score=85, Evalue=7e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33527; Mature: 33527

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKVLTDKKTILLLTLPGLFVYTFAILAPIFLSVYIGMTDWSGIDKPVFIGLKNFKTILF
CCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHH
SDMTFWKSLYHALLLALSYLFIQHPIALTFAILIDKIGGRAEKIFRTIFFIPAIIPIIVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SRMWVSLYDPQYGLINKALDLFHLGFLKQQWLGDPKTVLASLIVIMMWQGFGWALLIYYA
HHHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
GLKGIPEELYEAARIDGATGFNLYTKITLPLLKPVIKVNFTIAIIYALKQMETVYLTTNG
CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
GPGDASQFIANYLYIKAFSSYQYGYANAISVLFVIITLLINILFLKVFKAENYEY
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHKVLTDKKTILLLTLPGLFVYTFAILAPIFLSVYIGMTDWSGIDKPVFIGLKNFKTILF
CCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHH
SDMTFWKSLYHALLLALSYLFIQHPIALTFAILIDKIGGRAEKIFRTIFFIPAIIPIIVT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
SRMWVSLYDPQYGLINKALDLFHLGFLKQQWLGDPKTVLASLIVIMMWQGFGWALLIYYA
HHHHEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHH
GLKGIPEELYEAARIDGATGFNLYTKITLPLLKPVIKVNFTIAIIYALKQMETVYLTTNG
CCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECC
GPGDASQFIANYLYIKAFSSYQYGYANAISVLFVIITLLINILFLKVFKAENYEY
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]