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The map label for this gene is UgpB5 [H]

Identifier: 20808711

GI number: 20808711

Start: 2231626

End: 2232987

Strand: Direct

Name: UgpB5 [H]

Synonym: TTE2345

Alternate gene names: 20808711

Gene position: 2231626-2232987 (Clockwise)

Preceding gene: 20808707

Following gene: 20808712

Centisome position: 82.98

GC content: 38.62

Gene sequence:

>1362_bases
TTGATGTCAAGAAAATCTTTTAAGCTATTGACTGCTTTTTTAGTCATCTTTGCTTTGATTGTGGGAGCGGTCGGATGTAG
CCAGTCAGCAAAATCACCTTCTAGTGAAGCTACATCCAACACTCAGCAAGATGCAAAACAACAGCAACAAACGATAAAAA
TCAAGTTTCTCTCCAATCTGCCTGATAGAACTTCAGGTCAAGGAAAGCTAGAACAGATGCTAATTGACGAATATATGAAA
GAACATCCAAATGTAAAAATTGAAGTAGAGGCTTTGCAGGACGAACCCTACAAACAGAAATTTAAAGTATATGCGGCTTC
CAATGAAATGCCTGACATTTTCATGGTGTGGGGACAGCCTTCCTTCTTCCTTCCCGTCATGAAAGCAGGATTGGTGGAAG
AAATCAAAATGGACCAGATAAAAGATTACGGCTTTAAAACTTCCTCGTTAAAAGATTTCATGTATGAAGGAAAGCTCTAT
GGACTTCCGAGAAACACTGACTTTATGGTCCTTTATTACAACAAAGGATTATTTGATAAGTACAGTGTAAACGTACCTAA
TACTTTTGATGAGTTACTTGGAGCTGTAAAAACTTTTAGAAAAAATAACATAGCTCCAATATCAATAAACGGGAAAGACA
AATGGTCCTTAGCAATACTCTATCAGGATTTAGTATTAAAAGAATCTGGAGACCAAGAATATATCTACAGAGTTCTTTCT
GAAAAGAACAACATATCTAAAGACCCTATACTTTTGAAAGCTGCTAAAGATTTTGTTGAGCTTGTAAATGCAGGCGGATT
CCAGGATTCCTTCATAGCAGCAGATTATGGAGCAGCAAACAACCTCTTTGCACAGGAAAAGGCTGCAATGTACTACATGG
GCTCATGGGAAGTGGGAATGGCCACAAATCCCAATTTTTCTGATTCATTTAAGAAAAATTTAGACGTTACTTACTTCCCA
ATCATTTCTGGCGGAAAAGCCAAAAATACTGACATACTCGCATGGCACGGTGGTGGGTATGCTGTATCTTCTAAATCCCC
AGTAAAAGAAGAAGCAATGAAGTTATTGCTCTTCATGATGGAACCCAACAGATGGACAAAGATAGGCTGGCAGGAAGGTT
TAGTAGTGCCTGGACAAGACTGGAGCAAATTCATGACAGGAAATGAAACCGAACTTCAGAAAAAGCTCACACAAATCTTC
TCAAGCGCAACCTCAGTAAGCGGAACAGTGTGGCAGGACTCTTACACTCCAAATTTTAAGACTGAAGCTGAAACTTTAAT
ACAAATGTTAGCAGCAAAGACTATAACCCCTGAGCAGTTTTTATCAAAACTTGAAGAGCTGGCAAAAGCTGAAATACAGT
AA

Upstream 100 bases:

>100_bases
AAAATTGTCTACTTAAACATTTACAAAAATGCTGATATAATGAAAACAAATCCATGGAAACTGAGGCGCCTCAGGAAATT
CTAAAAAGAGGGGGAAATTT

Downstream 100 bases:

>100_bases
AATATGCCTACTTCCGGGGCAACCCGGAAGTAGGTAAATTCATCAAAGAGGTGACAACATGCACAAAGTTTTAACTGATA
AAAAGACTATTCTACTTCTC

Product: sugar-binding periplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 453; Mature: 453

Protein sequence:

>453_residues
MMSRKSFKLLTAFLVIFALIVGAVGCSQSAKSPSSEATSNTQQDAKQQQQTIKIKFLSNLPDRTSGQGKLEQMLIDEYMK
EHPNVKIEVEALQDEPYKQKFKVYAASNEMPDIFMVWGQPSFFLPVMKAGLVEEIKMDQIKDYGFKTSSLKDFMYEGKLY
GLPRNTDFMVLYYNKGLFDKYSVNVPNTFDELLGAVKTFRKNNIAPISINGKDKWSLAILYQDLVLKESGDQEYIYRVLS
EKNNISKDPILLKAAKDFVELVNAGGFQDSFIAADYGAANNLFAQEKAAMYYMGSWEVGMATNPNFSDSFKKNLDVTYFP
IISGGKAKNTDILAWHGGGYAVSSKSPVKEEAMKLLLFMMEPNRWTKIGWQEGLVVPGQDWSKFMTGNETELQKKLTQIF
SSATSVSGTVWQDSYTPNFKTEAETLIQMLAAKTITPEQFLSKLEELAKAEIQ

Sequences:

>Translated_453_residues
MMSRKSFKLLTAFLVIFALIVGAVGCSQSAKSPSSEATSNTQQDAKQQQQTIKIKFLSNLPDRTSGQGKLEQMLIDEYMK
EHPNVKIEVEALQDEPYKQKFKVYAASNEMPDIFMVWGQPSFFLPVMKAGLVEEIKMDQIKDYGFKTSSLKDFMYEGKLY
GLPRNTDFMVLYYNKGLFDKYSVNVPNTFDELLGAVKTFRKNNIAPISINGKDKWSLAILYQDLVLKESGDQEYIYRVLS
EKNNISKDPILLKAAKDFVELVNAGGFQDSFIAADYGAANNLFAQEKAAMYYMGSWEVGMATNPNFSDSFKKNLDVTYFP
IISGGKAKNTDILAWHGGGYAVSSKSPVKEEAMKLLLFMMEPNRWTKIGWQEGLVVPGQDWSKFMTGNETELQKKLTQIF
SSATSVSGTVWQDSYTPNFKTEAETLIQMLAAKTITPEQFLSKLEELAKAEIQ
>Mature_453_residues
MMSRKSFKLLTAFLVIFALIVGAVGCSQSAKSPSSEATSNTQQDAKQQQQTIKIKFLSNLPDRTSGQGKLEQMLIDEYMK
EHPNVKIEVEALQDEPYKQKFKVYAASNEMPDIFMVWGQPSFFLPVMKAGLVEEIKMDQIKDYGFKTSSLKDFMYEGKLY
GLPRNTDFMVLYYNKGLFDKYSVNVPNTFDELLGAVKTFRKNNIAPISINGKDKWSLAILYQDLVLKESGDQEYIYRVLS
EKNNISKDPILLKAAKDFVELVNAGGFQDSFIAADYGAANNLFAQEKAAMYYMGSWEVGMATNPNFSDSFKKNLDVTYFP
IISGGKAKNTDILAWHGGGYAVSSKSPVKEEAMKLLLFMMEPNRWTKIGWQEGLVVPGQDWSKFMTGNETELQKKLTQIF
SSATSVSGTVWQDSYTPNFKTEAETLIQMLAAKTITPEQFLSKLEELAKAEIQ

Specific function: Probably part of the binding-protein-dependent transport system yurMNO [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 51033; Mature: 51033

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSRKSFKLLTAFLVIFALIVGAVGCSQSAKSPSSEATSNTQQDAKQQQQTIKIKFLSNL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHEEEEEEECCC
PDRTSGQGKLEQMLIDEYMKEHPNVKIEVEALQDEPYKQKFKVYAASNEMPDIFMVWGQP
CCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHEEEEEECCCCCCCEEEEECCC
SFFLPVMKAGLVEEIKMDQIKDYGFKTSSLKDFMYEGKLYGLPRNTDFMVLYYNKGLFDK
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEECCCCCCEEEEEECCCCCCE
YSVNVPNTFDELLGAVKTFRKNNIAPISINGKDKWSLAILYQDLVLKESGDQEYIYRVLS
EECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEHHHHCCCCCHHHHHHHHH
EKNNISKDPILLKAAKDFVELVNAGGFQDSFIAADYGAANNLFAQEKAAMYYMGSWEVGM
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHCCCEEEEECCEEECC
ATNPNFSDSFKKNLDVTYFPIISGGKAKNTDILAWHGGGYAVSSKSPVKEEAMKLLLFMM
CCCCCCCHHHHCCCCEEEEEEECCCCCCCCCEEEECCCCEEECCCCCHHHHHHHHHHHEE
EPNRWTKIGWQEGLVVPGQDWSKFMTGNETELQKKLTQIFSSATSVSGTVWQDSYTPNFK
CCCCEEECCCCCCEEECCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC
TEAETLIQMLAAKTITPEQFLSKLEELAKAEIQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMSRKSFKLLTAFLVIFALIVGAVGCSQSAKSPSSEATSNTQQDAKQQQQTIKIKFLSNL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHHHHHHHEEEEEEECCC
PDRTSGQGKLEQMLIDEYMKEHPNVKIEVEALQDEPYKQKFKVYAASNEMPDIFMVWGQP
CCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHEEEEEECCCCCCCEEEEECCC
SFFLPVMKAGLVEEIKMDQIKDYGFKTSSLKDFMYEGKLYGLPRNTDFMVLYYNKGLFDK
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCEEEECCCCCCEEEEEECCCCCCE
YSVNVPNTFDELLGAVKTFRKNNIAPISINGKDKWSLAILYQDLVLKESGDQEYIYRVLS
EECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEEHHHHCCCCCHHHHHHHHH
EKNNISKDPILLKAAKDFVELVNAGGFQDSFIAADYGAANNLFAQEKAAMYYMGSWEVGM
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHCCCEEEEECCEEECC
ATNPNFSDSFKKNLDVTYFPIISGGKAKNTDILAWHGGGYAVSSKSPVKEEAMKLLLFMM
CCCCCCCHHHHCCCCEEEEEEECCCCCCCCCEEEECCCCEEECCCCCHHHHHHHHHHHEE
EPNRWTKIGWQEGLVVPGQDWSKFMTGNETELQKKLTQIFSSATSVSGTVWQDSYTPNFK
CCCCEEECCCCCCEEECCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC
TEAETLIQMLAAKTITPEQFLSKLEELAKAEIQ
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]