Click here to switch to the map view.

The map label for this gene is yacL [H]

Identifier: 20808689

GI number: 20808689

Start: 2204085

End: 2205191

Strand: Reverse

Name: yacL [H]

Synonym: TTE2323

Alternate gene names: 20808689

Gene position: 2205191-2204085 (Counterclockwise)

Preceding gene: 20808691

Following gene: 20808688

Centisome position: 81.99

GC content: 38.84

Gene sequence:

>1107_bases
ATGGTGTTTTATAAAATTGCAAGAGGAGTTATAGGTATATTAGGATTAGCGTTGGGCTTTGAATTGGTAAAATTTCTATT
GAGTTTAAGCGTATTTCAAAGTTTTGTACCAAGTAAATTGCCTTACCTGACTACCACGATAATTTATGGGGCAGGAACTC
TTATAGTCGGAATTATATTTTATATAGTGTCACCTGTTTTCATAAAGTGGGCAAGAGACTTTGAGCAGTGGCTGGAAGCG
AAATTGCAGAATATGCCGATTGACGAGATTTTGATAGGGGCTTTTGGCTTGATAATAGGCCTTATCGTGGCGAATTTGCT
GAGTGCTCCCTTGTATCCGATTTTCATAGTTGGGAAAATAGTTCCTATACTGCTGAATTTATTTCTTGGTTACCTGGGGA
TAAGGATTTCTCTCAAGAAAAAAGAAGAGCTTTTGAATATTTTTTCTTTCATGAAAAAATTGGGGTCTCAGAAGGGCAAT
AAAAATGAATACGGTGGAATACCCAAAATTTTGGATACTAGCGTCATTATTGATGGGAGGATATTTGATATATGCAAGAC
TGGGTTCATTGAAGGGCCGCTCATCATACCGTCTTTTGTACTAGAAGAGTTGAGGCACATCGCTGACTCTTCTGATACTT
TAAAAAGAAACAGAGGAAGAAGGGGATTGGATGTACTAAATAGGATACAGAATGAGCTTAACATAAAAGTGGAGATAGTG
GATAAGCATATAGATGCTACAGAAGTGGATACAAAGCTTTTGAAACTAGCTCAGATGCTGAAGGGCAAGATAATCACAAA
TGACTATAATTTAAACAAAGTGGCAGAATTTCACAGAGTACCTGTCCTCAACATAAATGAGCTTTCCAATGCAGTAAAAC
CCATTGTGCTGCCGGGAGAAGAAATGGTGGTGCAGATAATAAAAGATGGCAAAGAAGCAGGGCAGGGAGTGGGTTATCTA
GATGACGGAACCATGATTGTGGTGGACGGAGGGAAAAAATTTATTGGAAGCACTATTGAGGTGCTTGTGACAAGCGTTTT
GCAGACTGCTGCAGGAAGAATGATATTTGCAAAGCCAAAGCAGGCAGAACAGGAAAAAGCGATTTGA

Upstream 100 bases:

>100_bases
GGTAAGCCCTTCATTATTCATGTAAAAATTTTGGCAAATTTTCTTCCAATTTGCTTATAATATTTAAAAAAATAGCCAAT
AATATAGGATAGGAGGTGAG

Downstream 100 bases:

>100_bases
CACAGGGTTTCCTGTGTTTTTTTGTTTAGAAAATGGTATAATTGGTTTGTAGAATATTTTATAAGAGGGATAGTAAATGA
ATGTGAGCGCTGTAATAGTA

Product: PilT family ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MVFYKIARGVIGILGLALGFELVKFLLSLSVFQSFVPSKLPYLTTTIIYGAGTLIVGIIFYIVSPVFIKWARDFEQWLEA
KLQNMPIDEILIGAFGLIIGLIVANLLSAPLYPIFIVGKIVPILLNLFLGYLGIRISLKKKEELLNIFSFMKKLGSQKGN
KNEYGGIPKILDTSVIIDGRIFDICKTGFIEGPLIIPSFVLEELRHIADSSDTLKRNRGRRGLDVLNRIQNELNIKVEIV
DKHIDATEVDTKLLKLAQMLKGKIITNDYNLNKVAEFHRVPVLNINELSNAVKPIVLPGEEMVVQIIKDGKEAGQGVGYL
DDGTMIVVDGGKKFIGSTIEVLVTSVLQTAAGRMIFAKPKQAEQEKAI

Sequences:

>Translated_368_residues
MVFYKIARGVIGILGLALGFELVKFLLSLSVFQSFVPSKLPYLTTTIIYGAGTLIVGIIFYIVSPVFIKWARDFEQWLEA
KLQNMPIDEILIGAFGLIIGLIVANLLSAPLYPIFIVGKIVPILLNLFLGYLGIRISLKKKEELLNIFSFMKKLGSQKGN
KNEYGGIPKILDTSVIIDGRIFDICKTGFIEGPLIIPSFVLEELRHIADSSDTLKRNRGRRGLDVLNRIQNELNIKVEIV
DKHIDATEVDTKLLKLAQMLKGKIITNDYNLNKVAEFHRVPVLNINELSNAVKPIVLPGEEMVVQIIKDGKEAGQGVGYL
DDGTMIVVDGGKKFIGSTIEVLVTSVLQTAAGRMIFAKPKQAEQEKAI
>Mature_368_residues
MVFYKIARGVIGILGLALGFELVKFLLSLSVFQSFVPSKLPYLTTTIIYGAGTLIVGIIFYIVSPVFIKWARDFEQWLEA
KLQNMPIDEILIGAFGLIIGLIVANLLSAPLYPIFIVGKIVPILLNLFLGYLGIRISLKKKEELLNIFSFMKKLGSQKGN
KNEYGGIPKILDTSVIIDGRIFDICKTGFIEGPLIIPSFVLEELRHIADSSDTLKRNRGRRGLDVLNRIQNELNIKVEIV
DKHIDATEVDTKLLKLAQMLKGKIITNDYNLNKVAEFHRVPVLNINELSNAVKPIVLPGEEMVVQIIKDGKEAGQGVGYL
DDGTMIVVDGGKKFIGSTIEVLVTSVLQTAAGRMIFAKPKQAEQEKAI

Specific function: Unknown

COG id: COG4956

COG function: function code R; Integral membrane protein (PIN domain superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 40737; Mature: 40737

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVFYKIARGVIGILGLALGFELVKFLLSLSVFQSFVPSKLPYLTTTIIYGAGTLIVGIIF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
YIVSPVFIKWARDFEQWLEAKLQNMPIDEILIGAFGLIIGLIVANLLSAPLYPIFIVGKI
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
VPILLNLFLGYLGIRISLKKKEELLNIFSFMKKLGSQKGNKNEYGGIPKILDTSVIIDGR
HHHHHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCEEECCH
IFDICKTGFIEGPLIIPSFVLEELRHIADSSDTLKRNRGRRGLDVLNRIQNELNIKVEIV
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHCCEEEEEE
DKHIDATEVDTKLLKLAQMLKGKIITNDYNLNKVAEFHRVPVLNINELSNAVKPIVLPGE
ECCCCHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCCHHHHHHHHCCEEECCH
EMVVQIIKDGKEAGQGVGYLDDGTMIVVDGGKKFIGSTIEVLVTSVLQTAAGRMIFAKPK
HHHHHHHHHHHHHCCCCCEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEECCC
QAEQEKAI
CCHHCCCC
>Mature Secondary Structure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CCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377; 7510287 [H]