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The map label for this gene is VirB11 [H]

Identifier: 20808473

GI number: 20808473

Start: 2003318

End: 2004547

Strand: Reverse

Name: VirB11 [H]

Synonym: TTE2075

Alternate gene names: 20808473

Gene position: 2004547-2003318 (Counterclockwise)

Preceding gene: 20808474

Following gene: 20808472

Centisome position: 74.53

GC content: 37.72

Gene sequence:

>1230_bases
ATGAGCCTTTCAGAGCGCTCCAAGCTGATAAACACTGCACGAAAAATAGATATAGACTTAATAGTGAATGCAGTAAGGCC
TCAGATGTTAAACTATCAGATACAGAATGCAGGCGATTTAAAAGGACTGCTGAGGCTGGAAGTAAAGAAATATCTTGAGC
AGAACTTTCCACACTACCTTGATAATCTCTATACTGTTACCGAAGAAGTATACAATAAAATGTACATGCTTGGGCCTTTT
GAAAAGTACCTTAAAATGGACGGAGTAACGGATATAATAAGCTTTGGGACAAGACTTATGTATGTAAAAAACGGAGTAAA
GTACGATGACGAAAGAGGCTTTGCAAGCATGGAAGAAGTCAGAGTAATATACGAAAGAATAATAGCAAACTCCGGGCAGA
ACATTTCCTATGCAGAGCCGTCAAAAGACGCTGAGCTTTATGACGGCTCCCGTGTAAAAGTAATAATTCCGCCAGAAGCT
CTGGAACCCTATATAATCATACGAAAACACACAAGCTTGAATAAAAATCTTGATGAGCTTATATATGGACTGCGGGGATT
GAATGACAGCATAGGTACAATAGAAATGGTAAAAAAGCGCACAAAAGAAGAAGAAAACTTTAATGGCACTCTATCAGAGT
ATTTCAAGATGTGTGTCAGGAACAGAAGAAACATTGTGGTTATAGGCGAAACGGGAGCGGGCAAAACAACATTTGTAAAT
GCTCTTACGTATTACATCCAGCCCAAACACATAGTAGCAGTGCTTGAAGACACAAGAGAAATGGAACTGCCTCTTCCTTA
CGTTTTTTACCTGAAAACAAGGGAAGAAAAAGAAGGAGCAAAAGCAATAACATATGAAGACATACTTTATGACTGTTTAA
GGGCAAATCCGGACAGAATCATACTGACAGAGATAAGAACACCAATATCAGCATATACCTTTATAAATGTCCTTAACTCA
GGACACAAAGGCTCTTTTACAACCATACATGCTGACAATGTTGAAATGGCTCTGGATAAACTCGAAATGCTCATAAAGGA
ATTTAAAAATATAGATGACAGAACAATAAGAAGGCTTATTGCAAAAGCAATTGATGTGCTCGTGTTTATAGGTCTTGAAG
AAGATGAAAAAGGTGATGTAATAGGACGTGCAGTAAAAGAGGTTGCAGAGCTCAGAGGTATTGATGAAAAAGGAAATTAC
ATTCTCGATTATAAATACATTAAGTGGTGA

Upstream 100 bases:

>100_bases
ACTTCAAAAGACGATTGAAGAATACAAAGAAAAAGAAGAAAAGAGGAAGAAAGTACTTATGGAACTTCAAAATCTTTTGC
AGTAAAGGCGGTGATGATTT

Downstream 100 bases:

>100_bases
AGGGGCATACTTCAAAGGTATGTCCCTTTTTTATTGAAGTCAAATTTTACAGGAGGTGTTTTTACATGTACAATGCACTC
ACATTTAACATTTACAAAAA

Product: ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 408

Protein sequence:

>409_residues
MSLSERSKLINTARKIDIDLIVNAVRPQMLNYQIQNAGDLKGLLRLEVKKYLEQNFPHYLDNLYTVTEEVYNKMYMLGPF
EKYLKMDGVTDIISFGTRLMYVKNGVKYDDERGFASMEEVRVIYERIIANSGQNISYAEPSKDAELYDGSRVKVIIPPEA
LEPYIIIRKHTSLNKNLDELIYGLRGLNDSIGTIEMVKKRTKEEENFNGTLSEYFKMCVRNRRNIVVIGETGAGKTTFVN
ALTYYIQPKHIVAVLEDTREMELPLPYVFYLKTREEKEGAKAITYEDILYDCLRANPDRIILTEIRTPISAYTFINVLNS
GHKGSFTTIHADNVEMALDKLEMLIKEFKNIDDRTIRRLIAKAIDVLVFIGLEEDEKGDVIGRAVKEVAELRGIDEKGNY
ILDYKYIKW

Sequences:

>Translated_409_residues
MSLSERSKLINTARKIDIDLIVNAVRPQMLNYQIQNAGDLKGLLRLEVKKYLEQNFPHYLDNLYTVTEEVYNKMYMLGPF
EKYLKMDGVTDIISFGTRLMYVKNGVKYDDERGFASMEEVRVIYERIIANSGQNISYAEPSKDAELYDGSRVKVIIPPEA
LEPYIIIRKHTSLNKNLDELIYGLRGLNDSIGTIEMVKKRTKEEENFNGTLSEYFKMCVRNRRNIVVIGETGAGKTTFVN
ALTYYIQPKHIVAVLEDTREMELPLPYVFYLKTREEKEGAKAITYEDILYDCLRANPDRIILTEIRTPISAYTFINVLNS
GHKGSFTTIHADNVEMALDKLEMLIKEFKNIDDRTIRRLIAKAIDVLVFIGLEEDEKGDVIGRAVKEVAELRGIDEKGNY
ILDYKYIKW
>Mature_408_residues
SLSERSKLINTARKIDIDLIVNAVRPQMLNYQIQNAGDLKGLLRLEVKKYLEQNFPHYLDNLYTVTEEVYNKMYMLGPFE
KYLKMDGVTDIISFGTRLMYVKNGVKYDDERGFASMEEVRVIYERIIANSGQNISYAEPSKDAELYDGSRVKVIIPPEAL
EPYIIIRKHTSLNKNLDELIYGLRGLNDSIGTIEMVKKRTKEEENFNGTLSEYFKMCVRNRRNIVVIGETGAGKTTFVNA
LTYYIQPKHIVAVLEDTREMELPLPYVFYLKTREEKEGAKAITYEDILYDCLRANPDRIILTEIRTPISAYTFINVLNSG
HKGSFTTIHADNVEMALDKLEMLIKEFKNIDDRTIRRLIAKAIDVLVFIGLEEDEKGDVIGRAVKEVAELRGIDEKGNYI
LDYKYIKW

Specific function: Unknown

COG id: COG4962

COG function: function code U; Flp pilus assembly protein, ATPase CpaF

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP E family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014155
- InterPro:   IPR002078
- InterPro:   IPR001482 [H]

Pfam domain/function: PF00437 GSPII_E [H]

EC number: NA

Molecular weight: Translated: 47229; Mature: 47098

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS00675 SIGMA54_INTERACT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSERSKLINTARKIDIDLIVNAVRPQMLNYQIQNAGDLKGLLRLEVKKYLEQNFPHYL
CCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCEEECCCCCHHHHHHHHHHHHHHHCCHHHH
DNLYTVTEEVYNKMYMLGPFEKYLKMDGVTDIISFGTRLMYVKNGVKYDDERGFASMEEV
HHHHHHHHHHHHHEECCCCHHHHHHHCCHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHH
RVIYERIIANSGQNISYAEPSKDAELYDGSRVKVIIPPEALEPYIIIRKHTSLNKNLDEL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHH
IYGLRGLNDSIGTIEMVKKRTKEEENFNGTLSEYFKMCVRNRRNIVVIGETGAGKTTFVN
HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHH
ALTYYIQPKHIVAVLEDTREMELPLPYVFYLKTREEKEGAKAITYEDILYDCLRANPDRI
HHHHEECCHHHEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEHHHHHHHHHHHCCCCEE
ILTEIRTPISAYTFINVLNSGHKGSFTTIHADNVEMALDKLEMLIKEFKNIDDRTIRRLI
EEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
AKAIDVLVFIGLEEDEKGDVIGRAVKEVAELRGIDEKGNYILDYKYIKW
HHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
SLSERSKLINTARKIDIDLIVNAVRPQMLNYQIQNAGDLKGLLRLEVKKYLEQNFPHYL
CCHHHHHHHHHHHHHHHHHHHHHHCHHHHCEEECCCCCHHHHHHHHHHHHHHHCCHHHH
DNLYTVTEEVYNKMYMLGPFEKYLKMDGVTDIISFGTRLMYVKNGVKYDDERGFASMEEV
HHHHHHHHHHHHHEECCCCHHHHHHHCCHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHH
RVIYERIIANSGQNISYAEPSKDAELYDGSRVKVIIPPEALEPYIIIRKHTSLNKNLDEL
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHH
IYGLRGLNDSIGTIEMVKKRTKEEENFNGTLSEYFKMCVRNRRNIVVIGETGAGKTTFVN
HHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHH
ALTYYIQPKHIVAVLEDTREMELPLPYVFYLKTREEKEGAKAITYEDILYDCLRANPDRI
HHHHEECCHHHEEEECCCCCCCCCCCEEEEEEECCCCCCCCEEHHHHHHHHHHHCCCCEE
ILTEIRTPISAYTFINVLNSGHKGSFTTIHADNVEMALDKLEMLIKEFKNIDDRTIRRLI
EEEECCCCHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
AKAIDVLVFIGLEEDEKGDVIGRAVKEVAELRGIDEKGNYILDYKYIKW
HHHHHHEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12910271; 3584073 [H]