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The map label for this gene is 20808466

Identifier: 20808466

GI number: 20808466

Start: 1998568

End: 1999497

Strand: Reverse

Name: 20808466

Synonym: TTE2067

Alternate gene names: NA

Gene position: 1999497-1998568 (Counterclockwise)

Preceding gene: 20808467

Following gene: 20808465

Centisome position: 74.35

GC content: 34.84

Gene sequence:

>930_bases
GTGCTTAAATTGATACTGCTGTTTTCACTGATAACTGCTTTGAGTGCTTTTTCCATCATAATGTTTTTGTACCTGCTGAA
AGAGTATAAAAAACAGGAAATAATAAGAAGAATGGAGAGGCAGCTCATAGCACCAAAGGAAAGAAAATTTAACACTTTAG
AAGTCTTAGGTTTTGGGAAAGTGCTGAAAAACTTTGACATTCTTCTTAAAAGAACAGGAATAAAAAAAGTTGATGCTGAA
AATCTCATTTTGTTTTTGTCTGTTCTAAACACATTTATATTTGCTCTCTTCATTATCAAAAATGAAGTTTTCTGGGCATT
TTTAGCTCCTGCCTTGATTTTTGTATCCGTACCGCTTGTCCTTGAAAAAATTGCCCAGAAAAGATACGTTAAATTTAATC
TGCAATTTGCTGAAGCAGTTCAGGACATAGCAGACTACCTAAAAATATCCGGAAACATCGTAAACGCTCTGGAAAAGGTG
ATAGACACTACAGAAAATCCCCTGAAAGACGAGATCAAAAAGATTGTAGCTAAGGTTGATGCAGGGATAAGCCTTTATGA
AGCACTGAAAGATTTTGCAAAAGAATCTGGAAGCCCTCTTGTGGAGGCATGGGTGGACTCAATGGTATTTGCAGGGCAGA
TGAAGGCAAATACGGCAGATATATGTCAGAAAATGTCTGCCAAGATAAAAGAAAGAATAAGGCAGAATAATAAAATAAGC
TCATTTATGAAAAGCACAAAAAGCACTGTAATAATGATAATTGCAATTACAATTCTTTTAATGCTTTCAACCTACACATC
GGGTCCAATGTACGCAGAAGCATTTACTACTACAGCAGGAAAACTGGTACTGCTTTATATAATCATAAGCTATGTAGTAA
CTACAGTTTTTGTGTTTAGAGCAATTGATAAACAAATAAGTTCCATTTAA

Upstream 100 bases:

>100_bases
TAATAAAAAATGATATTTTGGAAATTTACAGAGAAAATTTAAAACTACCTAAACCTTCTTTTTCTGTTCAGGAAAATAAA
TTAAATCAGCTGGAAGCGGG

Downstream 100 bases:

>100_bases
AGGAAGGTGCGGAAAATGAAAATTTTTAAGGAAAACACAATCAAAAAAATAACCGGAGAAGACGTGTTTACAAGAATAGA
CAGAGAAATAAAAGCCGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: Bacterial Type II Secretion System Protein F Domain; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain Protein

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MLKLILLFSLITALSAFSIIMFLYLLKEYKKQEIIRRMERQLIAPKERKFNTLEVLGFGKVLKNFDILLKRTGIKKVDAE
NLILFLSVLNTFIFALFIIKNEVFWAFLAPALIFVSVPLVLEKIAQKRYVKFNLQFAEAVQDIADYLKISGNIVNALEKV
IDTTENPLKDEIKKIVAKVDAGISLYEALKDFAKESGSPLVEAWVDSMVFAGQMKANTADICQKMSAKIKERIRQNNKIS
SFMKSTKSTVIMIIAITILLMLSTYTSGPMYAEAFTTTAGKLVLLYIIISYVVTTVFVFRAIDKQISSI

Sequences:

>Translated_309_residues
MLKLILLFSLITALSAFSIIMFLYLLKEYKKQEIIRRMERQLIAPKERKFNTLEVLGFGKVLKNFDILLKRTGIKKVDAE
NLILFLSVLNTFIFALFIIKNEVFWAFLAPALIFVSVPLVLEKIAQKRYVKFNLQFAEAVQDIADYLKISGNIVNALEKV
IDTTENPLKDEIKKIVAKVDAGISLYEALKDFAKESGSPLVEAWVDSMVFAGQMKANTADICQKMSAKIKERIRQNNKIS
SFMKSTKSTVIMIIAITILLMLSTYTSGPMYAEAFTTTAGKLVLLYIIISYVVTTVFVFRAIDKQISSI
>Mature_309_residues
MLKLILLFSLITALSAFSIIMFLYLLKEYKKQEIIRRMERQLIAPKERKFNTLEVLGFGKVLKNFDILLKRTGIKKVDAE
NLILFLSVLNTFIFALFIIKNEVFWAFLAPALIFVSVPLVLEKIAQKRYVKFNLQFAEAVQDIADYLKISGNIVNALEKV
IDTTENPLKDEIKKIVAKVDAGISLYEALKDFAKESGSPLVEAWVDSMVFAGQMKANTADICQKMSAKIKERIRQNNKIS
SFMKSTKSTVIMIIAITILLMLSTYTSGPMYAEAFTTTAGKLVLLYIIISYVVTTVFVFRAIDKQISSI

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34985; Mature: 34985

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCC
>Mature Secondary Structure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HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA