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The map label for this gene is 20808453

Identifier: 20808453

GI number: 20808453

Start: 1990644

End: 1991414

Strand: Reverse

Name: 20808453

Synonym: TTE2054

Alternate gene names: NA

Gene position: 1991414-1990644 (Counterclockwise)

Preceding gene: 20808454

Following gene: 20808452

Centisome position: 74.05

GC content: 36.96

Gene sequence:

>771_bases
ATGACTCGTCCAACTAAATGTCCAAAATGCGGAGGAGAACTTGTAACTATATACAAAACATTTGAAGTAGACGGGCACAG
AGCTGAAAATGTACCCGTCCTTACGTGCCCAAGATGCAGCATTTTTCTTCTGGATACACAGCTTTTTATAGACATAACAG
AAAGGGCAGAAGACTTCAAAGACAAGGATCAGCTTCTGGAAGAGCTGAGAGAAATAAAAGAAGATGAAGAAATAAGGGAC
ATACTAAAACAGTACACATTTCAGAACCATATAAAAGAGGTTTTAAATGAAAGAGGTATATCTTTGAGGCGCCTTGCAAA
CATGCTTGATGTATCCCCAAACTACATCCATATACTTACAAAAAATCAGTCAACAAGCATAAGAACAGCTTTAAAGATGG
CCTACGCACTGGGAGTAGATGTAAACAGGCTTTATACTTTAAGAAGAATTGATGAGGAGTATAAAGAGCCCAGCAAAACT
CTTTACACCAGAATTTCCAAAGAGGAAAGAGAACAGGATGAAAAAATAAAAGAAGAACTAAAGAAAATGAATGTAAAGCT
GTATGTAGATGAGGTTTTGAAGAAAAAAGGTTTAAGAAGAACTCAGCTTGCTGCAAGGCTTGATATTAGCCCACAGGAAA
TGTACAACATAGTAAAAATAAGAAAAGGGAGTACAGGCATAGAAACTGCACTAAAAATGGCTTACGCTATTGGCGTTGAT
GTAAATGAACTATTTAGGTTGGAAGAGGTAGAAAAAGAGGTAGGAGAGTAA

Upstream 100 bases:

>100_bases
ATTTGATCCAGAAATTACAGACATTTTCATAGAATTGGAGGTATACAAAATCAACAAATGAGTATATAATCTTTATAGAA
CCGGAAAGAAGGTGCAAAAA

Downstream 100 bases:

>100_bases
ATCCTGCCTCTTTTAATTTTATTTATTGACGGTAGCAATAAATAAATGTATAATATTAAGTGAAGAAAGGGGATGTATAA
AATGAGCCTTAACAAAGTCA

Product: helix-turn-helix

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MTRPTKCPKCGGELVTIYKTFEVDGHRAENVPVLTCPRCSIFLLDTQLFIDITERAEDFKDKDQLLEELREIKEDEEIRD
ILKQYTFQNHIKEVLNERGISLRRLANMLDVSPNYIHILTKNQSTSIRTALKMAYALGVDVNRLYTLRRIDEEYKEPSKT
LYTRISKEEREQDEKIKEELKKMNVKLYVDEVLKKKGLRRTQLAARLDISPQEMYNIVKIRKGSTGIETALKMAYAIGVD
VNELFRLEEVEKEVGE

Sequences:

>Translated_256_residues
MTRPTKCPKCGGELVTIYKTFEVDGHRAENVPVLTCPRCSIFLLDTQLFIDITERAEDFKDKDQLLEELREIKEDEEIRD
ILKQYTFQNHIKEVLNERGISLRRLANMLDVSPNYIHILTKNQSTSIRTALKMAYALGVDVNRLYTLRRIDEEYKEPSKT
LYTRISKEEREQDEKIKEELKKMNVKLYVDEVLKKKGLRRTQLAARLDISPQEMYNIVKIRKGSTGIETALKMAYAIGVD
VNELFRLEEVEKEVGE
>Mature_255_residues
TRPTKCPKCGGELVTIYKTFEVDGHRAENVPVLTCPRCSIFLLDTQLFIDITERAEDFKDKDQLLEELREIKEDEEIRDI
LKQYTFQNHIKEVLNERGISLRRLANMLDVSPNYIHILTKNQSTSIRTALKMAYALGVDVNRLYTLRRIDEEYKEPSKTL
YTRISKEEREQDEKIKEELKKMNVKLYVDEVLKKKGLRRTQLAARLDISPQEMYNIVKIRKGSTGIETALKMAYAIGVDV
NELFRLEEVEKEVGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29920; Mature: 29789

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPTKCPKCGGELVTIYKTFEVDGHRAENVPVLTCPRCSIFLLDTQLFIDITERAEDFK
CCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEECCCCEEEEEEHHHHHHHHHHHHCCC
DKDQLLEELREIKEDEEIRDILKQYTFQNHIKEVLNERGISLRRLANMLDVSPNYIHILT
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEE
KNQSTSIRTALKMAYALGVDVNRLYTLRRIDEEYKEPSKTLYTRISKEEREQDEKIKEEL
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KKMNVKLYVDEVLKKKGLRRTQLAARLDISPQEMYNIVKIRKGSTGIETALKMAYAIGVD
HHCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
VNELFRLEEVEKEVGE
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRPTKCPKCGGELVTIYKTFEVDGHRAENVPVLTCPRCSIFLLDTQLFIDITERAEDFK
CCCCCCCCCCCCEEEEEEEEECCCCCCCCCCEEECCCCEEEEEEHHHHHHHHHHHHCCC
DKDQLLEELREIKEDEEIRDILKQYTFQNHIKEVLNERGISLRRLANMLDVSPNYIHILT
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCEEEEEE
KNQSTSIRTALKMAYALGVDVNRLYTLRRIDEEYKEPSKTLYTRISKEEREQDEKIKEEL
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
KKMNVKLYVDEVLKKKGLRRTQLAARLDISPQEMYNIVKIRKGSTGIETALKMAYAIGVD
HHCCHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
VNELFRLEEVEKEVGE
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA