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The map label for this gene is RpsA2 [H]

Identifier: 20808441

GI number: 20808441

Start: 1980372

End: 1981145

Strand: Reverse

Name: RpsA2 [H]

Synonym: TTE2040

Alternate gene names: 20808441

Gene position: 1981145-1980372 (Counterclockwise)

Preceding gene: 20808442

Following gene: 20808440

Centisome position: 73.66

GC content: 38.37

Gene sequence:

>774_bases
ATGACAGAAGCATGGCAGGACATTTATGCCTCAAGGCAGTCAAACAAAATTCTAACAGGTACCTTAAGCGCAATAGAAAG
CCAGGAAGATAAAAACTTTGCAGTCATATTCTACGACGGAGTAAAAGTAATAATACCTTTTGAAGAAATGGGAATCGAAA
ACATAAACAAAACAATTGTACGCTCAATGATAGGCGCTGAAATAGACTTTGTAGTACGTGGAATAGACACAGAAAAAGAA
ATAGCAATTGCCTCAAGAAAATTCGCAATGAACTTAAGGAAAAAATACGAACTTCCAAAGCATGAAGAAGGAGACGTAAT
ACTTGCCCGCATCGTTGCAATAGGCAAAAACCATGCCATTGCAGAAGTATATGGAATAGAAACCAAGGTACCAAAAGAAG
AGATAGGATACGGCTATATAGACAGAATAAACGACCTTCTGCAGGTTGGAGACAGAGTACCGGCCAAAATAACAAAACTG
GACATAGAAAACAGCGTAGTAGAAATCTCAATAAAGCAGACAAAGCCAAATCCATTTGAGCAGGTAGATACAAAATACAA
AAAAGGAGGAGAATATTTAGGCACTGTAACAGGCTCACAGCCCTATGGATACTTCGTCAACCTTGAACCCGGAATAGATG
TATTATGTCCCAATCCTTACTGGAAAACAAAAATAGAAAAAGGCGACAAAGTTACAGTGCGCATAACAAGAATAGACCAC
AAAAAGCAAAGAATAACAGGCGTTTTAAAAAGGCTTGTCAGAAAAGCGCAGTAG

Upstream 100 bases:

>100_bases
ACAGCTTAAAAATTCCATATTAAGCCTTAAAAAGAGCCTGGAAAATGCACTGGGCTCTTTTTAAAATAAAAAAAAACTAA
AATGAAAGGAGAAGGTAAAA

Downstream 100 bases:

>100_bases
ACAGGGCAGGAAGGGTTTATCCTGCCCCTGTTATTCGGCTGTTTGTGGTAAACGTTTAAAGGAATATCAAAAGAGCTGTT
TACAGAACAATATTTTTGAA

Product: ribosomal protein S1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MTEAWQDIYASRQSNKILTGTLSAIESQEDKNFAVIFYDGVKVIIPFEEMGIENINKTIVRSMIGAEIDFVVRGIDTEKE
IAIASRKFAMNLRKKYELPKHEEGDVILARIVAIGKNHAIAEVYGIETKVPKEEIGYGYIDRINDLLQVGDRVPAKITKL
DIENSVVEISIKQTKPNPFEQVDTKYKKGGEYLGTVTGSQPYGYFVNLEPGIDVLCPNPYWKTKIEKGDKVTVRITRIDH
KKQRITGVLKRLVRKAQ

Sequences:

>Translated_257_residues
MTEAWQDIYASRQSNKILTGTLSAIESQEDKNFAVIFYDGVKVIIPFEEMGIENINKTIVRSMIGAEIDFVVRGIDTEKE
IAIASRKFAMNLRKKYELPKHEEGDVILARIVAIGKNHAIAEVYGIETKVPKEEIGYGYIDRINDLLQVGDRVPAKITKL
DIENSVVEISIKQTKPNPFEQVDTKYKKGGEYLGTVTGSQPYGYFVNLEPGIDVLCPNPYWKTKIEKGDKVTVRITRIDH
KKQRITGVLKRLVRKAQ
>Mature_256_residues
TEAWQDIYASRQSNKILTGTLSAIESQEDKNFAVIFYDGVKVIIPFEEMGIENINKTIVRSMIGAEIDFVVRGIDTEKEI
AIASRKFAMNLRKKYELPKHEEGDVILARIVAIGKNHAIAEVYGIETKVPKEEIGYGYIDRINDLLQVGDRVPAKITKLD
IENSVVEISIKQTKPNPFEQVDTKYKKGGEYLGTVTGSQPYGYFVNLEPGIDVLCPNPYWKTKIEKGDKVTVRITRIDHK
KQRITGVLKRLVRKAQ

Specific function: Converts 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP) [H]

COG id: COG0539

COG function: function code J; Ribosomal protein S1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 S1 motif domains [H]

Homologues:

None

Paralogues:

None

Copy number: 16,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003451
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR000110
- InterPro:   IPR022967 [H]

Pfam domain/function: PF02401 LYTB; PF00575 S1 [H]

EC number: =1.17.1.2 [H]

Molecular weight: Translated: 29117; Mature: 28986

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEAWQDIYASRQSNKILTGTLSAIESQEDKNFAVIFYDGVKVIIPFEEMGIENINKTIV
CCCHHHHHHHCCCCCEEEEEHHHHHHCCCCCCEEEEEECCEEEEEEHHHHCHHHHHHHHH
RSMIGAEIDFVVRGIDTEKEIAIASRKFAMNLRKKYELPKHEEGDVILARIVAIGKNHAI
HHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHCCCCCE
AEVYGIETKVPKEEIGYGYIDRINDLLQVGDRVPAKITKLDIENSVVEISIKQTKPNPFE
EEEECCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCHH
QVDTKYKKGGEYLGTVTGSQPYGYFVNLEPGIDVLCPNPYWKTKIEKGDKVTVRITRIDH
HHHHHHHCCCCEEEEEECCCCCEEEEEECCCCEEECCCCCCCCEECCCCEEEEEEEECCC
KKQRITGVLKRLVRKAQ
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TEAWQDIYASRQSNKILTGTLSAIESQEDKNFAVIFYDGVKVIIPFEEMGIENINKTIV
CCHHHHHHHCCCCCEEEEEHHHHHHCCCCCCEEEEEECCEEEEEEHHHHCHHHHHHHHH
RSMIGAEIDFVVRGIDTEKEIAIASRKFAMNLRKKYELPKHEEGDVILARIVAIGKNHAI
HHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHCCCCCE
AEVYGIETKVPKEEIGYGYIDRINDLLQVGDRVPAKITKLDIENSVVEISIKQTKPNPFE
EEEECCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCCCHH
QVDTKYKKGGEYLGTVTGSQPYGYFVNLEPGIDVLCPNPYWKTKIEKGDKVTVRITRIDH
HHHHHHHCCCCEEEEEECCCCCEEEEEECCCCEEECCCCCCCCEECCCCEEEEEEEECCC
KKQRITGVLKRLVRKAQ
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]