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The map label for this gene is 20808439

Identifier: 20808439

GI number: 20808439

Start: 1979274

End: 1979684

Strand: Reverse

Name: 20808439

Synonym: TTE2037

Alternate gene names: NA

Gene position: 1979684-1979274 (Counterclockwise)

Preceding gene: 20808440

Following gene: 20808438

Centisome position: 73.61

GC content: 26.76

Gene sequence:

>411_bases
ATGATTAGGGCTGTAATTGATACAAATGTATTTGTATCAATTTTGTTTGGCAGTCCTATCATGAAAGAACTTCTTGAGTA
CTGTGCAATGTATAAATTTACATGGGTTATATCCGAAGATATATATTCTGAATATAAAAGAGTTATAGAGTATAAAAAGT
TCAATTTCCGCAAAGAAATTAAACAAAAACTGCTTTATTTTATCGAAGAACTTGCAGAATTTGTTCATGTTTCAAGTAAT
GTAACAGTATCAAGAGACAAGGATGATAATAAATTCATTAATTGTGCAATAGATGGAAATTGTAATTTTATAGTATCTGG
TGACAAAGATTTGTTAGAAATCAAAGAATACGGTGGAATACGTATTGTAACAGTAAAAGAATTTTTGGAAATTATTAAAA
ATAAAAATTGA

Upstream 100 bases:

>100_bases
GATATGTTTGAAATAACAAAAGAAACTAAGCGGGTATTAGAATCACACGGCTACTCAGAAGATAATATTTCTGAACTTGT
AAAAGAAATAAGGGAAACTA

Downstream 100 bases:

>100_bases
AAAACAATTAAAATGTGGAATTAAGGTATATTCAAAGCTTTTAAAAAGCCTTTGAATATACCTTTTTTATTTTTACAAAG
CAGAACAAACGGAACAAAAA

Product: nucleic acid-binding protein

Products: NA

Alternate protein names: PilT Domain-Containing Protein

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MIRAVIDTNVFVSILFGSPIMKELLEYCAMYKFTWVISEDIYSEYKRVIEYKKFNFRKEIKQKLLYFIEELAEFVHVSSN
VTVSRDKDDNKFINCAIDGNCNFIVSGDKDLLEIKEYGGIRIVTVKEFLEIIKNKN

Sequences:

>Translated_136_residues
MIRAVIDTNVFVSILFGSPIMKELLEYCAMYKFTWVISEDIYSEYKRVIEYKKFNFRKEIKQKLLYFIEELAEFVHVSSN
VTVSRDKDDNKFINCAIDGNCNFIVSGDKDLLEIKEYGGIRIVTVKEFLEIIKNKN
>Mature_136_residues
MIRAVIDTNVFVSILFGSPIMKELLEYCAMYKFTWVISEDIYSEYKRVIEYKKFNFRKEIKQKLLYFIEELAEFVHVSSN
VTVSRDKDDNKFINCAIDGNCNFIVSGDKDLLEIKEYGGIRIVTVKEFLEIIKNKN

Specific function: Unknown

COG id: COG1569

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16016; Mature: 16016

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRAVIDTNVFVSILFGSPIMKELLEYCAMYKFTWVISEDIYSEYKRVIEYKKFNFRKEI
CEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KQKLLYFIEELAEFVHVSSNVTVSRDKDDNKFINCAIDGNCNFIVSGDKDLLEIKEYGGI
HHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCEEEEECCCHHHHHHHCCCE
RIVTVKEFLEIIKNKN
EEEEHHHHHHHHCCCC
>Mature Secondary Structure
MIRAVIDTNVFVSILFGSPIMKELLEYCAMYKFTWVISEDIYSEYKRVIEYKKFNFRKEI
CEEEEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
KQKLLYFIEELAEFVHVSSNVTVSRDKDDNKFINCAIDGNCNFIVSGDKDLLEIKEYGGI
HHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEECCCCEEEEECCCHHHHHHHCCCE
RIVTVKEFLEIIKNKN
EEEEHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA